We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TMSB4X
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • TMSB4X
TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:3409.7 nTPM
HPA:3409.7 nTPM
GTEx:2509.8 nTPM
FANTOM5:26.5 Scaled Tags Per Million

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB033806
Ovarian stroma cells Not detected



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3409.7
overview
Female, age 64
Ovary sample 192
nTPM: 2304.5
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 2136.4
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 2345.1
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 2791
N/A
Female, age 16
Ovary sample 3663
nTPM: 7125.2
N/A
Female, age 20
Ovary sample 3664
nTPM: 4341.4
N/A
Female, age 32
Ovary sample 3665
nTPM: 2824.2

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2509.8
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 2509.8
Samples: 180

Max nTPM: 4470.2
Min nTPM: 1302.3
Std nTPM: 616.3
Median nTPM: 2350.3
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 4470.2
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 4426.4
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 4170.4
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 4018.3
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 3961.7
GTEX-1GN1U-2326-SM-9MQK4 50-59 years, female 3909.5
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 3749.9
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 3650.7
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 3579.3
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 3556.3
GTEX-ZV6S-1426-SM-59HKX 40-49 years, female 3530.4
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 3495.8
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 3493.0
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 3447.2
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 3365.5
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 3352.2
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 3349.1
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 3305.5
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 3304.3
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 3280.1
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 3270.6
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 3270.4
GTEX-14JG6-0626-SM-68716 30-39 years, female 3266.9
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 3241.2
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 3236.5
GTEX-1F88F-2126-SM-9KNUK 60-69 years, female 3228.9
GTEX-QVJO-3126-SM-COH22 60-69 years, female 3217.0
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 3201.0
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 3174.2
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 3171.4
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 3168.1
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 3152.4
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 3138.6
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 3137.4
GTEX-1LVAN-2726-SM-CNPQG 50-59 years, female 3102.9
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 3078.8
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 3067.7
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 3054.5
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 3053.4
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 3012.8
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 2973.2
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 2957.1
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 2956.2
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 2946.9
GTEX-1GF9X-2426-SM-7SB7W 40-49 years, female 2942.2
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 2936.6
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 2928.7
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 2912.5
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 2909.0
GTEX-R55G-1526-SM-48FER 40-49 years, female 2901.4
GTEX-RU72-2226-SM-46MUE 50-59 years, female 2871.3
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 2844.4
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 2823.7
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 2822.8
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 2796.5
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 2788.0
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 2784.3
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 2766.4
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 2764.7
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 2751.0
GTEX-P78B-1926-SM-3P616 40-49 years, female 2742.9
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 2726.9
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 2711.9
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 2698.1
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 2645.4
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 2623.1
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 2615.9
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 2611.9
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 2605.4
GTEX-183WM-1926-SM-72D5F 70-79 years, female 2603.1
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 2586.0
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 2580.8
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 2578.6
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 2577.2
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 2576.3
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 2536.4
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 2528.4
GTEX-Q734-0726-SM-48TZP 40-49 years, female 2521.5
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 2496.7
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 2456.3
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 2447.9
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 2447.4
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 2439.7
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 2423.6
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 2396.0
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 2394.9
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 2390.0
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 2389.2
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 2376.4
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 2364.5
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 2336.0
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 2335.3
GTEX-QCQG-1426-SM-48U22 50-59 years, female 2328.2
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 2316.7
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 2312.4
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 2311.8
GTEX-11I78-1926-SM-59878 50-59 years, female 2301.5
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 2291.6
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 2289.4
GTEX-WI4N-2526-SM-4OOSE 40-49 years, female 2287.6
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 2280.0
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 2276.6
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 2275.5
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 2275.3
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 2272.5
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 2270.6
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 2270.5
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 2261.9
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 2236.8
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 2221.4
GTEX-14BIN-1426-SM-664NI 50-59 years, female 2215.8
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 2213.5
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 2212.6
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 2211.1
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 2202.0
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 2198.2
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 2190.2
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 2178.3
GTEX-13SLX-2426-SM-664OM 50-59 years, female 2175.6
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 2162.2
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 2152.5
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 2151.7
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 2135.4
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 2131.6
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 2130.8
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 2127.4
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 2124.4
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 2121.1
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 2111.0
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 2107.0
GTEX-1399S-2126-SM-5J2MH 30-39 years, female 2100.5
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 2094.8
GTEX-15EOM-1526-SM-68723 20-29 years, female 2093.0
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 2087.2
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 2085.8
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 2064.1
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 2057.2
GTEX-13X6H-1026-SM-5SIBE 50-59 years, female 2045.3
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 2038.7
GTEX-14PKV-1226-SM-6871T 20-29 years, female 2032.8
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 2006.5
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 2003.6
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 1994.9
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 1992.3
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 1991.2
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 1970.7
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 1968.3
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 1968.1
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 1960.8
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 1948.0
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 1941.9
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 1936.1
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 1934.5
GTEX-S341-0726-SM-4AD5R 40-49 years, female 1924.1
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 1920.8
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 1919.8
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 1914.1
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 1888.8
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 1885.7
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 1882.5
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 1865.7
GTEX-18D9A-0826-SM-718C1 30-39 years, female 1854.1
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 1847.3
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 1846.2
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 1813.2
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 1779.1
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 1703.7
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 1702.2
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 1701.2
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 1678.3
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 1675.9
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 1660.7
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 1620.4
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 1592.4
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 1577.7
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 1520.0
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 1494.6
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 1430.2
GTEX-145ME-1226-SM-5SIB6 40-49 years, female 1317.1
GTEX-S32W-1226-SM-4AD67 50-59 years, female 1302.3
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

26.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 26.5
FF:10020-101D2 47,75,84 years, female 26.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org