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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
334.9
nTPM
FANTOM5:
97.5
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
334.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 273.5
2090
Male, age 80, both hemispheres
355.2
2188
Female, age 91, both hemispheres
339.6
1984
Male, age 76, both hemispheres
222.3
2301
Female, age 85, both hemispheres
176.9
Dorsal cochlear nucleus nTPM: 269.4
2802
Male, age 74, right hemisphere
339.5
2370
Male, age 61, both hemispheres
298.3
2187
Female, age 91, both hemispheres
279.9
2378
Male, age 80, both hemispheres
227.2
2058
Male, age 76, both hemispheres
202.3
Dorsal tegmental nucleus nTPM: 269.0
2326
Male, age 74, both hemispheres
331.3
2083
Male, age 80, both hemispheres
319.4
1936
Male, age 76, left hemisphere
239.5
2358
Male, age 61, both hemispheres
185.7
Dorsolateral tegmental area nTPM: 289.1
2654
Male, age 80, both hemispheres
393.5
2751
Female, age 85, both hemispheres
362.6
2360
Male, age 74, both hemispheres
280.7
2337
Male, age 61, both hemispheres
218.7
2141
Male, age 76, both hemispheres
189.9
Kolliker-Fuse nucleus nTPM: 251.4
2315
Male, age 76, right hemisphere
336.9
2163
Male, age 80, both hemispheres
222.4
2793
Female, age 91, left hemisphere
194.8
Lateral lemniscal nuclei nTPM: 201.4
2036
Male, age 80, both hemispheres
237.1
2453
Male, age 74, right hemisphere
204.9
2746
Female, age 85, left hemisphere
200.8
2320
Female, age 91, left hemisphere
197.8
2169
Male, age 76, both hemispheres
166.1
Lateral parabrachial nucleus nTPM: 261.8
2013
Male, age 80, both hemispheres
321.8
2792
Male, age 76, both hemispheres
265.2
2790
Male, age 61, both hemispheres
255.1
2139
Female, age 85, right hemisphere
205.1
Lateral vestibular nucleus nTPM: 199.2
2311
Male, age 80, both hemispheres
241.0
2184
Male, age 76, both hemispheres
157.3
Locus coeruleus nTPM: 205.1
2123
Female, age 91, both hemispheres
249.4
2317
Female, age 72, unknown
220.7
2720
Male, age 74, both hemispheres
209.8
2162
Male, age 80, both hemispheres
196.7
2014
Male, age 55, unknown
195.7
1980
Male, age 76, both hemispheres
186.7
2788
Male, age 74, unknown
176.9
Medial parabrachial nucleus nTPM: 251.6
2170
Female, age 91, both hemispheres
327.2
2463
Female, age 85, right hemisphere
300.0
2156
Male, age 61, both hemispheres
222.8
2786
Male, age 76, both hemispheres
214.8
2854
Male, age 80, both hemispheres
193.3
Medial periolivary nuclei nTPM: 227.6
2063
Male, age 76, both hemispheres
304.6
2081
Male, age 80, both hemispheres
244.8
2791
Male, age 74, right hemisphere
239.8
2458
Female, age 91, both hemispheres
215.0
2171
Female, age 85, both hemispheres
133.7
Motor facial nucleus nTPM: 211.3
2126
Male, age 61, both hemispheres
278.4
2365
Male, age 74, right hemisphere
234.3
2795
Female, age 91, both hemispheres
229.2
2062
Male, age 76, both hemispheres
223.8
2697
Female, age 85, both hemispheres
154.3
2327
Male, age 80, both hemispheres
147.7
Motor trigeminal nucleus nTPM: 230.7
2335
Male, age 61, both hemispheres
271.3
2309
Male, age 76, both hemispheres
239.1
2560
Male, age 74, both hemispheres
232.0
2321
Female, age 91, both hemispheres
209.9
2079
Male, age 80, both hemispheres
201.0
Nuclei of the trapezoid body nTPM: 203.3
1983
Male, age 76, both hemispheres
276.7
2166
Male, age 80, both hemispheres
206.7
2368
Female, age 91, both hemispheres
205.1
2735
Female, age 85, both hemispheres
164.3
2159
Male, age 61, both hemispheres
163.7
Nucleus raphe magnus nTPM: 181.3
2455
Male, age 74, both hemispheres
213.1
2459
Female, age 91, both hemispheres
208.2
2051
Male, age 76, both hemispheres
198.5
2328
Male, age 80, both hemispheres
172.5
2160
Male, age 61, both hemispheres
169.8
2172
Female, age 85, both hemispheres
125.5
Paramedian reticular nucleus nTPM: 246.6
2057
Male, age 80, both hemispheres
295.9
2052
Male, age 76, both hemispheres
256.8
2313
Male, age 61, both hemispheres
239.2
2050
Female, age 85, both hemispheres
194.5
Pedunculopontine tegmental nucleus nTPM: 234.9
2334
Male, age 80, both hemispheres
246.0
2338
Male, age 61, both hemispheres
234.2
1921
Female, age 85, both hemispheres
224.4
Pontine nuclei nTPM: 246.1
2454
Male, age 74, left hemisphere
287.2
2319
Female, age 91, both hemispheres
284.5
1968
Male, age 76, left hemisphere
283.4
2109
Female, age 72, unknown
259.1
1863
Male, age 55, unknown
249.1
2115
Male, age 80, left hemisphere
220.3
2727
Male, age 61, right hemisphere
207.9
2787
Female, age 85, both hemispheres
177.0
Pontine raphe nucleus nTPM: 218.5
2122
Female, age 85, midline
230.7
2853
Male, age 76, midline
206.2
Posteroventral cochlear nucleus nTPM: 334.9
2135
Female, age 91, both hemispheres
422.2
2341
Male, age 80, both hemispheres
408.0
2371
Male, age 61, both hemispheres
304.2
2070
Male, age 76, both hemispheres
288.2
2752
Female, age 85, both hemispheres
251.8
Principal sensory trigeminal nucleus nTPM: 185.1
2158
Male, age 61, both hemispheres
229.0
2367
Female, age 91, left hemisphere
203.7
2324
Male, age 76, both hemispheres
154.0
2008
Male, age 80, left hemisphere
153.7
Reticular pontine nucleus, caudal nTPM: 256.3
2559
Male, age 74, both hemispheres
350.4
2092
Male, age 76, both hemispheres
273.0
2457
Female, age 91, both hemispheres
265.2
2332
Male, age 80, right hemisphere
136.6
Reticular pontine nucleus, oral nTPM: 247.4
2361
Male, age 74, both hemispheres
286.2
2366
Female, age 91, both hemispheres
265.8
1939
Male, age 80, both hemispheres
250.4
2012
Female, age 85, both hemispheres
234.0
2167
Male, age 76, both hemispheres
200.8
Reticulotegmental nucleus nTPM: 218.6
2452
Male, age 74, both hemispheres
305.8
2322
Female, age 91, both hemispheres
207.1
2333
Male, age 80, both hemispheres
188.4
2325
Male, age 76, both hemispheres
172.9
Spinal trigeminal nucleus, oral nTPM: 233.4
2737
Female, age 85, both hemispheres
246.8
1978
Male, age 76, both hemispheres
245.4
2164
Male, age 80, both hemispheres
208.1
Subcoeruleus area nTPM: 277.6
2451
Male, age 74, both hemispheres
394.2
2369
Female, age 85, left hemisphere
352.1
2323
Female, age 91, left hemisphere
219.8
1958
Male, age 80, both hemispheres
216.4
2089
Male, age 76, left hemisphere
205.4
Superior olive nTPM: 206.3
2020
Male, age 76, both hemispheres
279.4
2364
Male, age 74, right hemisphere
219.6
1875
Female, age 85, both hemispheres
193.3
2561
Female, age 91, both hemispheres
189.2
2329
Male, age 80, right hemisphere
149.9
Ventral periolivary nuclei nTPM: 223.4
2023
Male, age 76, both hemispheres
348.4
2794
Female, age 91, left hemisphere
216.0
2165
Male, age 80, both hemispheres
205.0
2130
Female, age 85, both hemispheres
124.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 204.1
2456
Female, age 91, both hemispheres
253.6
2359
Male, age 61, both hemispheres
211.1
2161
Male, age 80, both hemispheres
207.1
2449
Male, age 74, both hemispheres
202.3
1959
Male, age 76, both hemispheres
201.0
2840
Female, age 85, both hemispheres
149.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
