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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:1261.0 nTPM
FANTOM5:67.9 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1261.0
Sample id Sample description nTPM
Area postrema
nTPM: 1261.0
2799 Male, age 61, both hemispheres 1637.4
2306 Male, age 80, both hemispheres 1294.0
2054 Male, age 76, both hemispheres 851.5
Dorsal medullary reticular nucleus
nTPM: 933.1
2373 Male, age 61, both hemispheres 1029.0
2040 Female, age 85, both hemispheres 1016.3
2088 Male, age 76, both hemispheres 753.9
Dorsal motor vagal complex
nTPM: 1207.0
2643 Male, age 74, both hemispheres 1599.9
2797 Male, age 61, both hemispheres 1588.8
2813 Female, age 72, unknown 1304.2
2807 Female, age 85, both hemispheres 1211.7
2133 Female, age 91, both hemispheres 1104.2
2844 Male, age 55, unknown 1076.7
2000 Male, age 74, unknown 892.7
2185 Male, age 76, both hemispheres 877.5
Gigantocellular reticular nuclei, medullary
nTPM: 927.3
2314 Male, age 61, both hemispheres 1090.2
1876 Female, age 85, both hemispheres 1025.2
2022 Male, age 76, right hemisphere 943.0
2387 Female, age 91, both hemispheres 932.6
2310 Male, age 80, both hemispheres 866.2
2462 Male, age 74, both hemispheres 706.9
Gigantocellular reticular nuclei, pars
nTPM: 846.9
2084 Female, age 85, both hemispheres 1048.6
2336 Male, age 61, both hemispheres 918.3
2706 Male, age 80, both hemispheres 819.4
2330 Male, age 80, both hemispheres 781.7
2168 Male, age 76, both hemispheres 666.6
Inferior olive
nTPM: 1172.5
2628 Female, age 91, both hemispheres 1329.3
2563 Male, age 74, both hemispheres 1269.5
2379 Male, age 80, both hemispheres 1196.0
2178 Male, age 61, both hemispheres 1081.6
2085 Female, age 85, both hemispheres 986.4
Lateral medullary reticular nucleus
nTPM: 1048.9
2804 Female, age 91, both hemispheres 1258.3
2190 Female, age 85, both hemispheres 1173.0
2374 Male, age 61, both hemispheres 1137.9
2852 Male, age 80, both hemispheres 1068.4
2044 Male, age 76, both hemispheres 878.6
2305 Male, age 74, both hemispheres 777.1
Medial olivary nucleus
nTPM: 1244.2
2851 Male, age 80, both hemispheres 1343.7
1962 Male, age 76, both hemispheres 1259.5
1943 Male, age 61, both hemispheres 1194.7
2138 Female, age 91, both hemispheres 1179.1
Medial vestibular nucleus
nTPM: 1028.5
2803 Female, age 91, both hemispheres 1217.6
2624 Male, age 61, both hemispheres 1180.4
2801 Male, age 74, both hemispheres 1025.8
2743 Female, age 85, both hemispheres 989.7
2093 Male, age 80, both hemispheres 927.6
2134 Male, age 76, both hemispheres 829.7
Motor hypoglossal nucleus
nTPM: 940.1
2132 Female, age 85, both hemispheres 1062.7
2182 Male, age 80, both hemispheres 1020.6
2125 Female, age 91, both hemispheres 947.9
2461 Male, age 61, both hemispheres 859.4
2277 Male, age 76, both hemispheres 809.7
Nucleus ambiguus
nTPM: 844.2
2071 Male, age 76, both hemispheres 1006.5
2096 Female, age 85, both hemispheres 682.0
Nucleus cuneatus
nTPM: 969.5
2805 Female, age 91, both hemispheres 1213.2
2808 Female, age 85, both hemispheres 1194.3
2564 Male, age 74, both hemispheres 1068.4
2380 Male, age 80, both hemispheres 1047.2
2381 Male, age 80, both hemispheres 1025.2
2562 Male, age 61, both hemispheres 1011.7
2376 Male, age 61, both hemispheres 858.8
2131 Male, age 76, both hemispheres 659.7
2100 Male, age 76, both hemispheres 646.9
Nucleus gracilis
nTPM: 1165.5
2627 Male, age 74, both hemispheres 1209.9
2382 Male, age 80, both hemispheres 1188.6
2299 Female, age 85, both hemispheres 1098.0
Nucleus raphe obscurus
nTPM: 1046.4
2845 Female, age 85, midline 1163.9
2800 Male, age 61, midline 1067.9
2142 Male, age 76, midline 907.3
Nucleus raphe pallidus
nTPM: 1127.4
1924 Male, age 61, midline 1383.2
2183 Male, age 80, midline 1166.7
2145 Male, age 76, midline 832.4
Nucleus tractus solitarii
nTPM: 979.4
2191 Female, age 85, both hemispheres 1195.0
2144 Female, age 91, right hemisphere 995.8
2656 Male, age 76, both hemispheres 881.5
2307 Male, age 80, both hemispheres 845.1
Parvicellular reticular nuclei
nTPM: 861.7
2119 Male, age 80, both hemispheres 944.1
2095 Male, age 76, both hemispheres 908.3
2558 Male, age 74, both hemispheres 732.7
Parvicellular reticular nuclei, medullary
nTPM: 981.6
2189 Female, age 91, both hemispheres 1015.6
2181 Male, age 80, left hemisphere 969.0
2091 Female, age 85, both hemispheres 960.1
Peritrigeminal nucleus
nTPM: 1075.0
2067 Female, age 85, both hemispheres 1312.2
2136 Male, age 76, both hemispheres 1040.1
2179 Male, age 61, both hemispheres 872.6
Prepositus hypoglossal nucleus
nTPM: 1072.5
2855 Female, age 85, right hemisphere 1080.8
2086 Male, age 80, both hemispheres 1064.3
Spinal trigeminal nucleus, caudal
nTPM: 907.7
2308 Male, age 80, both hemispheres 977.0
2642 Male, age 74, both hemispheres 964.2
2390 Female, age 91, both hemispheres 944.2
2312 Male, age 61, both hemispheres 940.2
2447 Male, age 76, both hemispheres 712.7
Spinal trigeminal nucleus, interpolar
nTPM: 990.1
2625 Male, age 61, both hemispheres 1131.1
2033 Male, age 80, both hemispheres 1023.1
2066 Male, age 76, right hemisphere 963.3
2386 Female, age 85, both hemispheres 930.6
2389 Female, age 91, both hemispheres 902.2
Spinal vestibular nucleus
nTPM: 1115.8
2806 Female, age 85, both hemispheres 1259.2
2796 Male, age 61, both hemispheres 1247.3
2384 Male, age 74, both hemispheres 1170.7
2780 Male, age 80, both hemispheres 1088.8
2748 Male, age 76, both hemispheres 972.9
2186 Female, age 91, both hemispheres 955.8
Superior vestibular nucleus
nTPM: 1096.6
2383 Male, age 74, both hemispheres 1209.0
2015 Male, age 80, both hemispheres 1149.7
2061 Male, age 76, both hemispheres 931.2
Ventral medullary reticular nucleus
nTPM: 953.2
2372 Male, age 61, both hemispheres 1085.8
2060 Male, age 76, both hemispheres 820.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1065.1
2302 Female, age 91, both hemispheres 1105.8
2118 Male, age 80, both hemispheres 1105.5
1986 Male, age 76, both hemispheres 1083.7
2741 Female, age 85, both hemispheres 1067.1
2180 Male, age 61, both hemispheres 963.2

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

67.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 67.9
FF:10174-103C3 60 years, female 89.8
FF:10155-103A2 76 years, female 67.5
FF:10038-101F2 18-64 years, mixed 46.4

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