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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1192.0
nTPM
FANTOM5:
118.3
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1192.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 993.3
2090
Male, age 80, both hemispheres
1081.3
2301
Female, age 85, both hemispheres
1069.0
2188
Female, age 91, both hemispheres
1017.0
1984
Male, age 76, both hemispheres
805.8
Dorsal cochlear nucleus nTPM: 1038.2
2802
Male, age 74, right hemisphere
1146.9
2187
Female, age 91, both hemispheres
1082.6
2370
Male, age 61, both hemispheres
1079.7
2378
Male, age 80, both hemispheres
1038.3
2058
Male, age 76, both hemispheres
843.4
Dorsal tegmental nucleus nTPM: 1175.7
2358
Male, age 61, both hemispheres
1468.3
2083
Male, age 80, both hemispheres
1217.4
2326
Male, age 74, both hemispheres
1101.8
1936
Male, age 76, left hemisphere
915.3
Dorsolateral tegmental area nTPM: 1142.8
2337
Male, age 61, both hemispheres
1486.7
2654
Male, age 80, both hemispheres
1327.0
2751
Female, age 85, both hemispheres
1001.7
2141
Male, age 76, both hemispheres
952.1
2360
Male, age 74, both hemispheres
946.6
Kolliker-Fuse nucleus nTPM: 1145.5
2315
Male, age 76, right hemisphere
1411.4
2163
Male, age 80, both hemispheres
1020.2
2793
Female, age 91, left hemisphere
1005.0
Lateral lemniscal nuclei nTPM: 726.2
2169
Male, age 76, both hemispheres
889.7
2453
Male, age 74, right hemisphere
724.6
2320
Female, age 91, left hemisphere
712.2
2746
Female, age 85, left hemisphere
692.0
2036
Male, age 80, both hemispheres
612.7
Lateral parabrachial nucleus nTPM: 1135.4
2792
Male, age 76, both hemispheres
1407.3
2013
Male, age 80, both hemispheres
1170.7
2790
Male, age 61, both hemispheres
1012.5
2139
Female, age 85, right hemisphere
951.4
Lateral vestibular nucleus nTPM: 1019.7
2311
Male, age 80, both hemispheres
1225.7
2184
Male, age 76, both hemispheres
813.7
Locus coeruleus nTPM: 968.9
2720
Male, age 74, both hemispheres
1335.6
2123
Female, age 91, both hemispheres
1036.4
2162
Male, age 80, both hemispheres
962.6
2317
Female, age 72, unknown
955.1
1980
Male, age 76, both hemispheres
846.5
2014
Male, age 55, unknown
840.4
2788
Male, age 74, unknown
805.5
Medial parabrachial nucleus nTPM: 1049.8
2170
Female, age 91, both hemispheres
1249.5
2854
Male, age 80, both hemispheres
1175.6
2156
Male, age 61, both hemispheres
1009.0
2786
Male, age 76, both hemispheres
943.0
2463
Female, age 85, right hemisphere
872.0
Medial periolivary nuclei nTPM: 767.6
2063
Male, age 76, both hemispheres
931.6
2458
Female, age 91, both hemispheres
763.1
2081
Male, age 80, both hemispheres
733.4
2791
Male, age 74, right hemisphere
731.4
2171
Female, age 85, both hemispheres
678.7
Motor facial nucleus nTPM: 851.6
2795
Female, age 91, both hemispheres
1012.0
2697
Female, age 85, both hemispheres
982.5
2365
Male, age 74, right hemisphere
867.1
2126
Male, age 61, both hemispheres
797.4
2062
Male, age 76, both hemispheres
770.3
2327
Male, age 80, both hemispheres
680.3
Motor trigeminal nucleus nTPM: 856.8
2335
Male, age 61, both hemispheres
1021.8
2309
Male, age 76, both hemispheres
903.8
2560
Male, age 74, both hemispheres
852.6
2079
Male, age 80, both hemispheres
766.3
2321
Female, age 91, both hemispheres
739.4
Nuclei of the trapezoid body nTPM: 749.7
1983
Male, age 76, both hemispheres
956.4
2166
Male, age 80, both hemispheres
796.8
2368
Female, age 91, both hemispheres
709.6
2159
Male, age 61, both hemispheres
691.3
2735
Female, age 85, both hemispheres
594.4
Nucleus raphe magnus nTPM: 748.4
2455
Male, age 74, both hemispheres
812.5
2051
Male, age 76, both hemispheres
801.6
2328
Male, age 80, both hemispheres
796.0
2160
Male, age 61, both hemispheres
715.2
2172
Female, age 85, both hemispheres
689.9
2459
Female, age 91, both hemispheres
675.2
Paramedian reticular nucleus nTPM: 935.2
2052
Male, age 76, both hemispheres
1035.5
2050
Female, age 85, both hemispheres
921.0
2313
Male, age 61, both hemispheres
921.0
2057
Male, age 80, both hemispheres
863.2
Pedunculopontine tegmental nucleus nTPM: 1192.0
2338
Male, age 61, both hemispheres
1461.4
2334
Male, age 80, both hemispheres
1237.1
1921
Female, age 85, both hemispheres
877.6
Pontine nuclei nTPM: 797.4
1863
Male, age 55, unknown
977.9
2319
Female, age 91, both hemispheres
939.3
2787
Female, age 85, both hemispheres
847.1
2454
Male, age 74, left hemisphere
796.5
1968
Male, age 76, left hemisphere
756.7
2115
Male, age 80, left hemisphere
735.9
2109
Female, age 72, unknown
722.3
2727
Male, age 61, right hemisphere
603.8
Pontine raphe nucleus nTPM: 924.8
2853
Male, age 76, midline
966.9
2122
Female, age 85, midline
882.6
Posteroventral cochlear nucleus nTPM: 1032.8
2371
Male, age 61, both hemispheres
1204.4
2341
Male, age 80, both hemispheres
1177.4
2135
Female, age 91, both hemispheres
1014.6
2070
Male, age 76, both hemispheres
902.7
2752
Female, age 85, both hemispheres
865.0
Principal sensory trigeminal nucleus nTPM: 772.8
2324
Male, age 76, both hemispheres
875.6
2367
Female, age 91, left hemisphere
819.6
2158
Male, age 61, both hemispheres
744.4
2008
Male, age 80, left hemisphere
651.6
Reticular pontine nucleus, caudal nTPM: 828.1
2092
Male, age 76, both hemispheres
984.8
2559
Male, age 74, both hemispheres
967.2
2457
Female, age 91, both hemispheres
760.1
2332
Male, age 80, right hemisphere
600.4
Reticular pontine nucleus, oral nTPM: 953.6
1939
Male, age 80, both hemispheres
1105.4
2167
Male, age 76, both hemispheres
1076.3
2366
Female, age 91, both hemispheres
1028.1
2012
Female, age 85, both hemispheres
809.3
2361
Male, age 74, both hemispheres
749.1
Reticulotegmental nucleus nTPM: 915.8
2452
Male, age 74, both hemispheres
1018.6
2333
Male, age 80, both hemispheres
894.9
2322
Female, age 91, both hemispheres
884.6
2325
Male, age 76, both hemispheres
865.1
Spinal trigeminal nucleus, oral nTPM: 825.6
2164
Male, age 80, both hemispheres
852.8
1978
Male, age 76, both hemispheres
835.2
2737
Female, age 85, both hemispheres
788.9
Subcoeruleus area nTPM: 1017.1
2451
Male, age 74, both hemispheres
1247.4
1958
Male, age 80, both hemispheres
1059.4
2323
Female, age 91, left hemisphere
1055.9
2369
Female, age 85, left hemisphere
1033.7
2089
Male, age 76, left hemisphere
689.3
Superior olive nTPM: 787.0
2020
Male, age 76, both hemispheres
925.0
2561
Female, age 91, both hemispheres
825.3
2364
Male, age 74, right hemisphere
795.2
2329
Male, age 80, right hemisphere
709.8
1875
Female, age 85, both hemispheres
679.8
Ventral periolivary nuclei nTPM: 848.6
2023
Male, age 76, both hemispheres
1019.3
2165
Male, age 80, both hemispheres
824.9
2794
Female, age 91, left hemisphere
822.6
2130
Female, age 85, both hemispheres
727.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 916.9
2359
Male, age 61, both hemispheres
1198.9
2840
Female, age 85, both hemispheres
962.4
1959
Male, age 76, both hemispheres
912.6
2161
Male, age 80, both hemispheres
896.9
2456
Female, age 91, both hemispheres
766.7
2449
Male, age 74, both hemispheres
763.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
