PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:409.4 nTPM
FANTOM5:801.3 Scaled Tags Per Million
Pig:643.1 nTPM
Mouse:322.5 nTPM
Allen mouse:2.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 409.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 325.5
2301 Female, age 85, both hemispheres 388.7
2188 Female, age 91, both hemispheres 337.1
2090 Male, age 80, both hemispheres 328.5
1984 Male, age 76, both hemispheres 247.7
Area postrema
nTPM: 254.4
2799 Male, age 61, both hemispheres 269.3
2306 Male, age 80, both hemispheres 257.2
2054 Male, age 76, both hemispheres 236.8
Dorsal cochlear nucleus
nTPM: 276.6
2187 Female, age 91, both hemispheres 411.9
2058 Male, age 76, both hemispheres 296.6
2370 Male, age 61, both hemispheres 252.8
2802 Male, age 74, right hemisphere 225.2
2378 Male, age 80, both hemispheres 196.8
Dorsal medullary reticular nucleus
nTPM: 287.1
2040 Female, age 85, both hemispheres 313.4
2088 Male, age 76, both hemispheres 277.6
2373 Male, age 61, both hemispheres 270.4
Dorsal motor vagal complex
nTPM: 301.7
2844 Male, age 55, unknown 426.7
2133 Female, age 91, both hemispheres 379.7
2000 Male, age 74, unknown 368.4
2813 Female, age 72, unknown 315.5
2185 Male, age 76, both hemispheres 285.2
2797 Male, age 61, both hemispheres 216.4
2643 Male, age 74, both hemispheres 216.2
2807 Female, age 85, both hemispheres 205.8
Dorsal tegmental nucleus
nTPM: 336.6
2358 Male, age 61, both hemispheres 391.0
2083 Male, age 80, both hemispheres 359.3
2326 Male, age 74, both hemispheres 326.3
1936 Male, age 76, left hemisphere 269.9
Dorsolateral tegmental area
nTPM: 331.3
2337 Male, age 61, both hemispheres 384.8
2751 Female, age 85, both hemispheres 357.4
2654 Male, age 80, both hemispheres 324.5
2141 Male, age 76, both hemispheres 303.1
2360 Male, age 74, both hemispheres 286.8
Gigantocellular reticular nuclei, medullary
nTPM: 282.5
2314 Male, age 61, both hemispheres 357.0
2310 Male, age 80, both hemispheres 314.6
2462 Male, age 74, both hemispheres 314.3
2022 Male, age 76, right hemisphere 262.1
1876 Female, age 85, both hemispheres 257.6
2387 Female, age 91, both hemispheres 189.2
Gigantocellular reticular nuclei, pars
nTPM: 279.9
2336 Male, age 61, both hemispheres 329.9
2084 Female, age 85, both hemispheres 321.9
2168 Male, age 76, both hemispheres 282.5
2330 Male, age 80, both hemispheres 242.8
2706 Male, age 80, both hemispheres 222.5
Inferior olive
nTPM: 337.2
2085 Female, age 85, both hemispheres 464.5
2563 Male, age 74, both hemispheres 414.2
2628 Female, age 91, both hemispheres 305.3
2178 Male, age 61, both hemispheres 303.4
2379 Male, age 80, both hemispheres 198.8
Kolliker-Fuse nucleus
nTPM: 334.4
2163 Male, age 80, both hemispheres 383.8
2315 Male, age 76, right hemisphere 316.5
2793 Female, age 91, left hemisphere 303.0
Lateral lemniscal nuclei
nTPM: 273.2
2169 Male, age 76, both hemispheres 291.7
2746 Female, age 85, left hemisphere 290.5
2036 Male, age 80, both hemispheres 269.6
2320 Female, age 91, left hemisphere 258.7
2453 Male, age 74, right hemisphere 255.7
Lateral medullary reticular nucleus
nTPM: 361.1
2305 Male, age 74, both hemispheres 475.2
2190 Female, age 85, both hemispheres 375.0
2852 Male, age 80, both hemispheres 347.3
2804 Female, age 91, both hemispheres 331.8
2374 Male, age 61, both hemispheres 318.9
2044 Male, age 76, both hemispheres 318.0
Lateral parabrachial nucleus
nTPM: 271.6
2139 Female, age 85, right hemisphere 331.4
2013 Male, age 80, both hemispheres 281.3
2790 Male, age 61, both hemispheres 249.4
2792 Male, age 76, both hemispheres 224.2
Lateral vestibular nucleus
nTPM: 376.0
2311 Male, age 80, both hemispheres 393.2
2184 Male, age 76, both hemispheres 358.7
Locus coeruleus
nTPM: 380.3
2123 Female, age 91, both hemispheres 505.5
2014 Male, age 55, unknown 468.1
1980 Male, age 76, both hemispheres 415.5
2720 Male, age 74, both hemispheres 368.8
2162 Male, age 80, both hemispheres 354.8
2317 Female, age 72, unknown 316.0
2788 Male, age 74, unknown 233.1
Medial olivary nucleus
nTPM: 314.7
2138 Female, age 91, both hemispheres 379.3
1962 Male, age 76, both hemispheres 328.7
2851 Male, age 80, both hemispheres 280.3
1943 Male, age 61, both hemispheres 270.6
Medial parabrachial nucleus
nTPM: 384.1
2170 Female, age 91, both hemispheres 618.8
2156 Male, age 61, both hemispheres 345.5
2463 Female, age 85, right hemisphere 336.9
2854 Male, age 80, both hemispheres 336.8
2786 Male, age 76, both hemispheres 282.4
Medial periolivary nuclei
nTPM: 284.9
2171 Female, age 85, both hemispheres 320.8
2063 Male, age 76, both hemispheres 304.9
2791 Male, age 74, right hemisphere 272.5
2081 Male, age 80, both hemispheres 271.0
2458 Female, age 91, both hemispheres 255.2
Medial vestibular nucleus
nTPM: 347.2
2801 Male, age 74, both hemispheres 421.1
2134 Male, age 76, both hemispheres 370.6
2743 Female, age 85, both hemispheres 352.7
2624 Male, age 61, both hemispheres 342.2
2093 Male, age 80, both hemispheres 337.6
2803 Female, age 91, both hemispheres 259.0
Motor facial nucleus
nTPM: 276.1
2365 Male, age 74, right hemisphere 353.8
2062 Male, age 76, both hemispheres 345.7
2126 Male, age 61, both hemispheres 308.8
2697 Female, age 85, both hemispheres 232.0
2327 Male, age 80, both hemispheres 217.8
2795 Female, age 91, both hemispheres 198.3
Motor hypoglossal nucleus
nTPM: 400.2
2182 Male, age 80, both hemispheres 459.3
2461 Male, age 61, both hemispheres 434.2
2125 Female, age 91, both hemispheres 429.0
2132 Female, age 85, both hemispheres 359.4
2277 Male, age 76, both hemispheres 319.2
Motor trigeminal nucleus
nTPM: 285.0
2335 Male, age 61, both hemispheres 331.3
2321 Female, age 91, both hemispheres 320.1
2560 Male, age 74, both hemispheres 259.0
2079 Male, age 80, both hemispheres 258.5
2309 Male, age 76, both hemispheres 255.9
Nuclei of the trapezoid body
nTPM: 304.1
1983 Male, age 76, both hemispheres 361.5
2159 Male, age 61, both hemispheres 356.7
2166 Male, age 80, both hemispheres 307.2
2735 Female, age 85, both hemispheres 297.4
2368 Female, age 91, both hemispheres 197.8
Nucleus ambiguus
nTPM: 354.8
2096 Female, age 85, both hemispheres 365.4
2071 Male, age 76, both hemispheres 344.3
Nucleus cuneatus
nTPM: 264.5
2564 Male, age 74, both hemispheres 340.0
2131 Male, age 76, both hemispheres 312.1
2100 Male, age 76, both hemispheres 280.7
2562 Male, age 61, both hemispheres 278.9
2381 Male, age 80, both hemispheres 267.0
2808 Female, age 85, both hemispheres 264.3
2376 Male, age 61, both hemispheres 244.7
2380 Male, age 80, both hemispheres 220.6
2805 Female, age 91, both hemispheres 172.0
Nucleus gracilis
nTPM: 271.4
2627 Male, age 74, both hemispheres 334.2
2382 Male, age 80, both hemispheres 256.4
2299 Female, age 85, both hemispheres 223.6
Nucleus raphe magnus
nTPM: 320.2
2160 Male, age 61, both hemispheres 397.4
2455 Male, age 74, both hemispheres 393.6
2172 Female, age 85, both hemispheres 317.2
2051 Male, age 76, both hemispheres 278.6
2328 Male, age 80, both hemispheres 272.1
2459 Female, age 91, both hemispheres 262.3
Nucleus raphe obscurus
nTPM: 340.1
2845 Female, age 85, midline 373.3
2800 Male, age 61, midline 326.6
2142 Male, age 76, midline 320.5
Nucleus raphe pallidus
nTPM: 409.4
1924 Male, age 61, midline 478.6
2183 Male, age 80, midline 431.0
2145 Male, age 76, midline 318.5
Nucleus tractus solitarii
nTPM: 266.6
2191 Female, age 85, both hemispheres 306.1
2656 Male, age 76, both hemispheres 293.6
2307 Male, age 80, both hemispheres 277.9
2144 Female, age 91, right hemisphere 188.7
Paramedian reticular nucleus
nTPM: 297.5
2057 Male, age 80, both hemispheres 354.4
2313 Male, age 61, both hemispheres 351.1
2050 Female, age 85, both hemispheres 284.4
2052 Male, age 76, both hemispheres 199.9
Parvicellular reticular nuclei
nTPM: 299.5
2119 Male, age 80, both hemispheres 371.6
2095 Male, age 76, both hemispheres 327.3
2558 Male, age 74, both hemispheres 199.4
Parvicellular reticular nuclei, medullary
nTPM: 342.0
2189 Female, age 91, both hemispheres 360.8
2091 Female, age 85, both hemispheres 348.7
2181 Male, age 80, left hemisphere 316.4
Pedunculopontine tegmental nucleus
nTPM: 309.0
2334 Male, age 80, both hemispheres 339.8
2338 Male, age 61, both hemispheres 306.4
1921 Female, age 85, both hemispheres 280.9
Peritrigeminal nucleus
nTPM: 383.0
2067 Female, age 85, both hemispheres 416.6
2179 Male, age 61, both hemispheres 366.7
2136 Male, age 76, both hemispheres 365.8
Pontine nuclei
nTPM: 347.6
1863 Male, age 55, unknown 417.6
2109 Female, age 72, unknown 408.3
2454 Male, age 74, left hemisphere 369.3
2787 Female, age 85, both hemispheres 363.8
1968 Male, age 76, left hemisphere 331.2
2727 Male, age 61, right hemisphere 310.6
2319 Female, age 91, both hemispheres 294.7
2115 Male, age 80, left hemisphere 285.4
Pontine raphe nucleus
nTPM: 290.0
2122 Female, age 85, midline 308.3
2853 Male, age 76, midline 271.6
Posteroventral cochlear nucleus
nTPM: 300.2
2752 Female, age 85, both hemispheres 358.8
2070 Male, age 76, both hemispheres 324.7
2341 Male, age 80, both hemispheres 303.8
2135 Female, age 91, both hemispheres 280.0
2371 Male, age 61, both hemispheres 233.6
Prepositus hypoglossal nucleus
nTPM: 321.4
2855 Female, age 85, right hemisphere 340.1
2086 Male, age 80, both hemispheres 302.8
Principal sensory trigeminal nucleus
nTPM: 298.4
2158 Male, age 61, both hemispheres 341.2
2324 Male, age 76, both hemispheres 339.1
2367 Female, age 91, left hemisphere 279.0
2008 Male, age 80, left hemisphere 234.4
Reticular pontine nucleus, caudal
nTPM: 287.7
2092 Male, age 76, both hemispheres 321.4
2559 Male, age 74, both hemispheres 319.6
2457 Female, age 91, both hemispheres 259.2
2332 Male, age 80, right hemisphere 250.7
Reticular pontine nucleus, oral
nTPM: 303.4
2361 Male, age 74, both hemispheres 364.3
2167 Male, age 76, both hemispheres 320.3
1939 Male, age 80, both hemispheres 304.1
2012 Female, age 85, both hemispheres 281.5
2366 Female, age 91, both hemispheres 246.7
Reticulotegmental nucleus
nTPM: 316.0
2322 Female, age 91, both hemispheres 351.4
2452 Male, age 74, both hemispheres 322.2
2333 Male, age 80, both hemispheres 302.9
2325 Male, age 76, both hemispheres 287.7
Spinal trigeminal nucleus, caudal
nTPM: 329.7
2308 Male, age 80, both hemispheres 355.7
2447 Male, age 76, both hemispheres 347.5
2390 Female, age 91, both hemispheres 336.9
2642 Male, age 74, both hemispheres 311.8
2312 Male, age 61, both hemispheres 296.6
Spinal trigeminal nucleus, interpolar
nTPM: 339.2
2625 Male, age 61, both hemispheres 442.4
2066 Male, age 76, right hemisphere 429.8
2033 Male, age 80, both hemispheres 313.9
2386 Female, age 85, both hemispheres 276.9
2389 Female, age 91, both hemispheres 233.1
Spinal trigeminal nucleus, oral
nTPM: 330.7
2164 Male, age 80, both hemispheres 374.5
2737 Female, age 85, both hemispheres 317.1
1978 Male, age 76, both hemispheres 300.6
Spinal vestibular nucleus
nTPM: 305.2
2780 Male, age 80, both hemispheres 363.3
2186 Female, age 91, both hemispheres 324.0
2748 Male, age 76, both hemispheres 322.3
2806 Female, age 85, both hemispheres 295.0
2796 Male, age 61, both hemispheres 293.9
2384 Male, age 74, both hemispheres 232.9
Subcoeruleus area
nTPM: 301.5
2323 Female, age 91, left hemisphere 340.0
2451 Male, age 74, both hemispheres 318.9
2369 Female, age 85, left hemisphere 309.1
1958 Male, age 80, both hemispheres 291.6
2089 Male, age 76, left hemisphere 248.2
Superior olive
nTPM: 262.3
2364 Male, age 74, right hemisphere 347.5
2329 Male, age 80, right hemisphere 268.5
2020 Male, age 76, both hemispheres 245.2
2561 Female, age 91, both hemispheres 234.7
1875 Female, age 85, both hemispheres 215.9
Superior vestibular nucleus
nTPM: 332.3
2015 Male, age 80, both hemispheres 344.4
2061 Male, age 76, both hemispheres 327.0
2383 Male, age 74, both hemispheres 325.5
Ventral medullary reticular nucleus
nTPM: 273.5
2060 Male, age 76, both hemispheres 291.0
2372 Male, age 61, both hemispheres 255.9
Ventral periolivary nuclei
nTPM: 264.0
2165 Male, age 80, both hemispheres 321.2
2130 Female, age 85, both hemispheres 299.5
2023 Male, age 76, both hemispheres 239.0
2794 Female, age 91, left hemisphere 196.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 370.2
2741 Female, age 85, both hemispheres 401.4
2180 Male, age 61, both hemispheres 389.7
1986 Male, age 76, both hemispheres 371.6
2118 Male, age 80, both hemispheres 350.6
2302 Female, age 91, both hemispheres 337.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 272.7
2449 Male, age 74, both hemispheres 303.3
2840 Female, age 85, both hemispheres 293.6
2161 Male, age 80, both hemispheres 290.1
2359 Male, age 61, both hemispheres 275.6
1959 Male, age 76, both hemispheres 252.7
2456 Female, age 91, both hemispheres 221.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 801.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 801.3
FF:10182-103D2 60 years, female 1069.3
FF:10165-103B3 76 years, female 533.4
Medulla oblongata
Scaled Tags Per Million: 520.0
FF:10174-103C3 60 years, female 868.6
FF:10155-103A2 76 years, female 446.8
FF:10038-101F2 18-64 years, mixed 244.5
Pons
Scaled Tags Per Million: 221.6
FF:10033-101E6 18-54 years, mixed 221.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 643.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 485.6
Samples: 4

Max nTPM: 544.4
Min nTPM: 450.6
Sample A Female 450.6
Sample B Female 466.6
Sample C Male 544.4
Sample D Male 480.6
Pons
nTPM: 643.1
Samples: 4

Max nTPM: 831.6
Min nTPM: 433.6
Sample A Female 831.6
Sample B Female 433.6
Sample C Male 621.0
Sample D Male 686.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 322.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 322.5
Samples: 4

Max nTPM: 386.4
Min nTPM: 272.7
Sample A Male 386.4
Sample B Male 273.5
Sample C Female 357.2
Sample D Female 272.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 2.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.8
2407 Antisense, RP_Baylor_102906, Mouse strain C57BL/6J (56 days, male) 1.8
2408 Antisense, RP_Baylor_102906, Mouse strain C57BL/6J (56 days, male) 1.1
Pons
Expression energy: 2.2
2407 Antisense, RP_Baylor_102906, Mouse strain C57BL/6J (56 days, male) 2.2
2408 Antisense, RP_Baylor_102906, Mouse strain C57BL/6J (56 days, male) 0.6

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