HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:221.2 nTPM
HPA Brain:139.9 nTPM
GTEx:221.2 nTPM
FANTOM5:115.8 Scaled Tags Per Million
Pig:2.7 nTPM
Mouse:508.7 nTPM
Allen mouse:17.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041394Antibody CAB016209
Glial cells LowLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 139.9
Sample id Sample description nTPM
Hippocampus
nTPM: 114.6
1898 Male, age 80, left hemisphere 169.6
2529 Female, age 94, left hemisphere 112.5
1855 Male, age 76, left hemisphere 112.4
2621 Female, age 67, right hemisphere 104.7
1911 Female, age 85, right hemisphere 95.9
2148 Female, age 91, left hemisphere 92.3
Dentate gyrus
nTPM: 109.0
1927 Female, age 91, both hemispheres 137.4
2010 Male, age 76, both hemispheres 127.3
2246 Female, age 85, both hemispheres 106.3
2528 Male, age 74, both hemispheres 104.7
2530 Female, age 94, left hemisphere 98.3
2531 Female, age 67, both hemispheres 80.2
Entorhinal gyrus
nTPM: 103.8
2764 Male, age 80, right hemisphere 123.7
1938 Female, age 85, left hemisphere 117.6
1787 Male, age 76, left hemisphere 105.5
2117 Female, age 91, right hemisphere 98.1
2686 Male, age 75, right hemisphere 92.0
2613 Female, age 94, left hemisphere 85.8
Hippocampus, CA1
nTPM: 127.3
2749 Male, age 80, left hemisphere 182.3
2527 Male, age 74, both hemispheres 134.0
1873 Female, age 85, both hemispheres 121.7
2045 Male, age 76, both hemispheres 105.3
2082 Female, age 91, right hemisphere 93.4
Hippocampus, CA2
nTPM: 128.8
1963 Male, age 80, left hemisphere 154.7
1892 Male, age 76, both hemispheres 153.6
2249 Male, age 74, both hemispheres 153.3
2437 Female, age 94, left hemisphere 114.5
1940 Female, age 85, left hemisphere 99.9
2113 Female, age 91, right hemisphere 96.8
Hippocampus, CA3
nTPM: 118.9
2436 Male, age 74, both hemispheres 169.7
2137 Male, age 80, left hemisphere 141.3
1867 Male, age 76, both hemispheres 140.1
1891 Female, age 85, both hemispheres 108.7
2861 Female, age 67, both hemispheres 77.1
2620 Female, age 94, left hemisphere 76.6
Parahippocampal cortex
nTPM: 111.4
1850 Male, age 80, both hemispheres 146.1
1933 Female, age 85, both hemispheres 126.9
1990 Female, age 91, right hemisphere 123.8
2250 Female, age 67, right hemisphere 122.9
2018 Male, age 76, both hemispheres 115.8
2245 Female, age 91, both hemispheres 106.0
2693 Female, age 94, both hemispheres 105.6
2532 Female, age 72, left hemisphere 96.4
2692 Male, age 74, both hemispheres 88.8
2622 Female, age 67, right hemisphere 81.8
Perirhinal gyrus
nTPM: 139.9
1847 Female, age 91, left hemisphere 180.6
1794 Male, age 80, right hemisphere 157.8
1841 Female, age 85, right hemisphere 140.6
2521 Female, age 94, right hemisphere 112.7
2848 Male, age 76, right hemisphere 107.5
Subiculum
nTPM: 111.9
1901 Male, age 80, both hemispheres 132.1
1977 Female, age 85, both hemispheres 126.8
2438 Female, age 94, left hemisphere 106.2
2619 Male, age 74, both hemispheres 103.8
2042 Male, age 76, both hemispheres 102.5
2729 Female, age 91, right hemisphere 99.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 221.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 221.2
Samples: 197

Max nTPM: 664.1
Min nTPM: 99.5
Std nTPM: 68.8
Median nTPM: 212.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 664.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 433.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 423.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 405.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 401.2
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 382.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 376.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 364.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 360.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 328.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 322.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 115.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.8
FF:10169-103B7 60 years, female 143.3
FF:10153-102I9 76 years, female 88.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 2.7
Pig sample Sample description nTPM
Subiculum
nTPM: 2.0
Samples: 4

Max nTPM: 3.2
Min nTPM: 0.7
Sample A Female 0.7
Sample B Female 3.2
Sample C Male 1.6
Sample D Male 2.5
Dorsal hippocampus
nTPM: 2.7
Samples: 4

Max nTPM: 3.5
Min nTPM: 0.8
Sample A Female 0.8
Sample B Female 3.1
Sample C Male 3.2
Sample D Male 3.5
Entorhinal cortex
nTPM: 1.9
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.3
Sample A Female 1.3
Sample B Female 1.9
Sample C Male 1.7
Sample D Male 2.6
Ventral hippocampus
nTPM: 2.7
Samples: 4

Max nTPM: 3.5
Min nTPM: 1.6
Sample A Female 2.8
Sample B Female 2.8
Sample C Male 1.6
Sample D Male 3.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 508.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 471.2
Samples: 4

Max nTPM: 514.7
Min nTPM: 442.6
Sample A Male 442.6
Sample B Male 452.9
Sample C Female 514.7
Sample D Female 474.5
Hippocampal formation
nTPM: 508.7
Samples: 4

Max nTPM: 583.6
Min nTPM: 462.0
Sample A Male 583.6
Sample B Male 462.0
Sample C Female 475.0
Sample D Female 514.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.7
576416 Antisense, RP_040826_01_G02, Mouse strain C57BL/6J (56 days, male) 20.8
1159 Antisense, RP_Baylor_253881, Mouse strain C57BL/6J (56 days, male) 14.6
1158 Antisense, RP_Baylor_253881, Mouse strain C57BL/6J (56 days, male) 10.1

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