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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
212.7
nTPM
GTEx:
212.7
nTPM
FANTOM5:
128.0
Scaled Tags Per Million
Pig:
2.3
nTPM
Mouse:
471.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
212.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 212.7
Samples: 105
Max nTPM: 296.6
Min nTPM: 136.5
Std nTPM: 33.0
Median nTPM:
414_1
84 years, female
296.6
153_1
70 years, female
291.4
413_1
59 years, female
286.8
35_1
74 years, female
286.1
17_1
71 years, male
275.6
246_1
77 years, male
268.7
126_1
63 years, male
267.6
375_1
74 years, female
260.8
490_1
67 years, female
258.6
466_1
57 years, female
256.1
237_1
82 years, male
254.2
377_1
82 years, female
252.6
81_1
67 years, male
251.7
43_1
64 years, female
247.2
468_1
89 years, male
246.7
120_1
70 years, female
245.0
18_1
88 years, male
243.4
415_1
77 years, female
243.1
316_1
62 years, male
241.3
229_1
69 years, female
240.9
6_1
73 years, female
240.6
162_1
79 years, female
240.0
142_1
61 years, female
239.5
115_1
83 years, male
237.1
495_1
57 years, female
236.4
265_1
87 years, male
235.7
217_1
76 years, male
234.2
189_1
76 years, male
233.9
145_1
84 years, male
232.4
149_1
88 years, male
230.3
396_1
62 years, male
229.3
2_1
77 years, female
229.2
4_1
88 years, female
228.0
501_1
88 years, male
227.9
322_1
76 years, male
227.2
319_1
81 years, male
226.9
389_1
86 years, female
225.4
376_1
75 years, female
224.2
386_1
76 years, male
223.9
117_1
61 years, male
223.7
266_1
85 years, male
223.3
447_1
81 years, male
222.9
518_1
75 years, female
222.0
491_1
89 years, female
221.3
139_1
64 years, female
220.3
394_1
75 years, female
219.1
42_1
85 years, male
216.9
526_1
61 years, male
216.3
321_1
62 years, female
215.8
379_1
60 years, male
213.7
315_1
62 years, female
213.6
404_1
82 years, female
212.4
355_1
70 years, female
211.6
405_1
91 years, male
211.3
384_1
83 years, male
210.9
499_1
55 years, female
208.5
324_1
76 years, male
207.9
254_1
77 years, female
207.7
218_1
71 years, female
205.6
335_1
73 years, female
204.7
320_1
89 years, female
203.9
406_1
79 years, male
202.6
251_1
78 years, male
202.4
243_1
75 years, male
200.2
163_1
78 years, male
200.1
172_1
72 years, female
198.8
307_1
66 years, female
198.8
311_1
78 years, male
197.3
350_1
84 years, female
197.3
506_1
65 years, male
196.1
308_1
70 years, female
193.4
480_1
63 years, male
193.3
354_1
81 years, female
192.9
286_1
68 years, female
192.7
32_1
67 years, male
192.6
109_1
81 years, female
192.3
425_1
59 years, female
192.3
137_1
83 years, male
191.7
313_1
79 years, female
191.3
173_1
67 years, male
190.4
348_1
84 years, male
190.0
288_1
66 years, female
188.3
177_1
74 years, male
186.8
9_1
66 years, female
185.4
318_1
68 years, male
184.1
264_1
73 years, female
183.0
119_1
70 years, female
182.7
291_1
76 years, male
181.0
89_1
63 years, male
180.9
503_1
68 years, male
180.8
517_1
88 years, male
180.6
347_1
72 years, male
175.7
352_1
62 years, male
174.7
349_1
83 years, male
173.5
356_1
87 years, female
171.4
452_1
88 years, female
168.6
292_1
71 years, male
167.4
351_1
91 years, male
164.6
353_1
82 years, female
161.3
295_1
61 years, female
160.5
317_1
60 years, male
160.0
314_1
67 years, male
155.9
293_1
68 years, female
148.8
41_1
94 years, female
140.0
99_1
64 years, male
136.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.