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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:721.1 nTPM
HPA Brain:383.9 nTPM
GTEx:721.1 nTPM
FANTOM5:25.6 Scaled Tags Per Million
Pig:238.0 nTPM
Mouse:370.8 nTPM
Allen mouse:13.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040688Antibody HPA055316
Glial cells Not detectedNot detected
Neuronal cells MediumMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

383.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 321.1
2846 Female, age 79, unknown 371.7
1857 Female, age 85, left hemisphere 369.5
1854 Male, age 80, left hemisphere 346.0
2290 Female, age 72, unknown 344.0
2481 Female, age 94, left hemisphere 325.6
1781 Male, age 74, unknown 288.1
2289 Male, age 61, right hemisphere 265.0
2288 Male, age 75, left hemisphere 258.4
Globus pallidus, externus
nTPM: 383.9
1996 Male, age 80, right hemisphere 471.0
2772 Female, age 79, unknown 406.5
2395 Male, age 75, both hemispheres 379.5
2646 Male, age 61, right hemisphere 361.1
2567 Female, age 72, unknown 301.3
Globus pallidus, internus
nTPM: 356.6
2483 Female, age 94, right hemisphere 426.8
2037 Male, age 80, right hemisphere 409.5
2287 Male, age 75, right hemisphere 377.1
2778 Female, age 91, both hemispheres 340.7
1818 Male, age 74, unknown 330.3
2566 Female, age 72, unknown 314.7
2111 Female, age 85, right hemisphere 296.8
Nucleus accumbens
nTPM: 341.4
1856 Female, age 91, right hemisphere 402.7
2698 Female, age 72, unknown 396.3
1806 Female, age 85, left hemisphere 373.3
1783 Male, age 74, unknown 355.9
2732 Male, age 80, right hemisphere 333.7
2824 Male, age 61, right hemisphere 304.7
2391 Female, age 94, left hemisphere 288.2
2286 Male, age 75, left hemisphere 275.9
Nucleus basalis of Meynert
nTPM: 344.1
2569 Male, age 61, both hemispheres 414.3
2393 Male, age 80, right hemisphere 329.6
2821 Male, age 75, both hemispheres 322.6
2484 Female, age 94, left hemisphere 310.1
Nucleus of the diagonal band
nTPM: 277.8
1812 Female, age 91, both hemispheres 325.7
1979 Male, age 74, unknown 309.7
2775 Male, age 80, right hemisphere 278.8
2195 Female, age 85, both hemispheres 247.2
2029 Male, age 61, right hemisphere 227.5
Putamen
nTPM: 306.8
2466 Female, age 79, unknown 325.8
1937 Female, age 91, right hemisphere 321.5
2482 Female, age 94, left hemisphere 319.9
1838 Male, age 80, right hemisphere 309.0
2647 Male, age 75, left hemisphere 302.7
2489 Female, age 72, unknown 287.9
1829 Male, age 74, unknown 280.7
Septal nuclei
nTPM: 282.8
2199 Male, age 80, right hemisphere 338.9
2031 Female, age 72, unknown 294.6
2009 Female, age 91, both hemispheres 275.8
2059 Female, age 85, both hemispheres 274.7
1960 Male, age 74, unknown 273.5
2394 Male, age 61, left hemisphere 267.6
2629 Female, age 94, right hemisphere 254.5
Stria terminalis, bed nucleus
nTPM: 247.0
1974 Female, age 91, both hemispheres 272.6
2201 Male, age 74, unknown 259.6
2486 Female, age 94, both hemispheres 208.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

721.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 555.7
Samples: 246

Max nTPM: 1360.6
Min nTPM: 275.8
Std nTPM: 126.1
Median nTPM: 540.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1360.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1100.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 897.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 888.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 874.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 862.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 861.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 858.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 855.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 853.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 816.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 769.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 769.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 757.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 748.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 735.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 732.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 727.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 727.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 726.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 725.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 716.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 716.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 706.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 705.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 698.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 688.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 683.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 683.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 682.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 681.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 680.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 678.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 674.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 673.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 672.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 667.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 663.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 662.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 658.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 657.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 656.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 644.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 644.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 643.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 642.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 638.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 637.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 634.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 629.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 629.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 623.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 623.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 620.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 620.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 619.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 618.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 617.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 615.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 614.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 614.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 612.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 612.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 611.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 611.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 605.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 605.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 604.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 604.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 602.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 601.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 600.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 600.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 597.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 593.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 592.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 591.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 590.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 589.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 587.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 583.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 582.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 580.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 578.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 578.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 578.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 575.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 575.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 573.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 573.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 573.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 571.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 570.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 570.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 569.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 569.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 568.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 568.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 567.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 566.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 565.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 565.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 565.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 564.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 564.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 562.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 560.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 560.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 558.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 557.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 551.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 551.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 550.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 545.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 544.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 544.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 544.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 544.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 543.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 543.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 543.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 542.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 540.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 540.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 539.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 536.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 534.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 533.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 531.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 530.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 528.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 527.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 525.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 525.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 524.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 523.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 522.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 521.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 518.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 517.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 517.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 517.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 514.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 512.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 512.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 511.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 510.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 510.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 510.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 509.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 509.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 509.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 509.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 506.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 501.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 499.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 498.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 498.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 495.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 494.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 491.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 491.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 490.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 489.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 489.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 489.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 488.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 487.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 486.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 486.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 483.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 482.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 481.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 480.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 478.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 477.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 476.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 475.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 474.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 473.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 471.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 467.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 467.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 466.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 464.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 462.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 462.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 461.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 461.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 460.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 460.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 460.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 459.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 459.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 458.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 458.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 457.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 457.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 456.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 454.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 453.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 452.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 448.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 447.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 446.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 444.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 443.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 442.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 441.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 441.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 441.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 439.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 438.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 437.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 436.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 436.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 433.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 431.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 431.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 431.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 430.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 428.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 428.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 422.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 420.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 419.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 414.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 414.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 413.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 412.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 412.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 412.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 408.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 407.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 404.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 404.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 400.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 400.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 399.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 390.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 381.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 376.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 374.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 361.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 339.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 275.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 721.1
Samples: 246

Max nTPM: 1769.1
Min nTPM: 329.0
Std nTPM: 182.5
Median nTPM: 694.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1769.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1658.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1418.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1381.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1212.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1199.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1178.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1167.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1141.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1125.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1107.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1063.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1046.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 987.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 954.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 952.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 944.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 941.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 936.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 929.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 927.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 919.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 912.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 909.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 902.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 902.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 900.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 884.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 881.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 875.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 873.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 868.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 865.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 863.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 861.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 861.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 859.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 852.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 851.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 840.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 836.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 831.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 831.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 825.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 823.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 822.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 821.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 820.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 820.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 817.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 816.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 816.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 815.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 810.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 807.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 806.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 803.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 802.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 802.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 798.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 798.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 796.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 796.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 795.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 794.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 791.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 789.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 789.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 788.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 786.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 784.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 783.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 781.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 781.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 779.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 777.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 775.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 775.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 772.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 772.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 768.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 765.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 757.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 755.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 755.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 754.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 754.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 752.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 751.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 751.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 751.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 750.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 748.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 748.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 744.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 742.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 739.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 737.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 734.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 732.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 730.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 726.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 724.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 723.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 722.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 719.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 715.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 711.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 710.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 710.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 710.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 708.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 706.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 705.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 704.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 703.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 702.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 700.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 698.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 698.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 697.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 696.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 694.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 694.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 693.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 693.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 691.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 690.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 690.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 688.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 687.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 687.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 680.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 679.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 677.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 676.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 675.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 675.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 674.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 674.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 673.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 672.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 668.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 666.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 665.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 665.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 663.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 659.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 657.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 657.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 655.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 650.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 648.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 648.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 643.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 642.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 641.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 640.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 640.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 639.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 638.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 636.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 636.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 636.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 636.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 633.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 633.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 631.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 627.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 625.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 623.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 620.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 619.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 618.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 617.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 617.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 616.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 614.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 613.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 613.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 612.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 611.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 610.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 605.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 603.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 601.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 601.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 598.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 598.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 598.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 595.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 594.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 592.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 592.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 590.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 590.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 589.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 587.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 587.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 586.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 586.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 585.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 582.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 580.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 579.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 579.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 578.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 577.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 577.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 575.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 574.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 572.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 568.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 565.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 562.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 560.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 558.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 551.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 550.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 543.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 541.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 541.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 539.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 535.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 535.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 521.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 521.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 521.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 513.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 509.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 508.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 507.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 504.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 495.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 488.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 484.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 484.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 474.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 472.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 460.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 453.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 452.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 449.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 447.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 409.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 329.0
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Brain - Putamen (basal ganglia)
Average nTPM: 565.9
Samples: 205

Max nTPM: 1014.0
Min nTPM: 328.8
Std nTPM: 126.5
Median nTPM: 544.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1014.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1006.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 993.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 939.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 937.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 900.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 864.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 858.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 846.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 840.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 833.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 795.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 792.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 787.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 783.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 767.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 764.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 758.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 755.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 749.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 747.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 742.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 735.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 711.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 701.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 693.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 692.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 681.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 680.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 678.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 669.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 665.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 656.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 654.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 654.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 650.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 648.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 644.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 641.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 640.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 640.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 639.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 638.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 638.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 638.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 632.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 631.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 628.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 626.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 621.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 621.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 621.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 619.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 619.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 618.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 618.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 618.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 617.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 616.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 615.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 614.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 614.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 613.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 609.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 609.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 607.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 606.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 602.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 601.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 597.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 597.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 592.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 592.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 592.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 581.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 580.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 580.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 580.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 579.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 579.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 577.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 575.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 571.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 570.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 570.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 567.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 563.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 561.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 559.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 559.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 559.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 558.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 558.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 556.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 556.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 555.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 553.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 553.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 547.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 546.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 546.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 544.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 544.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 543.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 543.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 542.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 539.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 539.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 539.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 536.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 535.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 535.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 534.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 532.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 530.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 526.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 523.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 523.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 521.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 521.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 521.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 518.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 518.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 516.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 515.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 510.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 510.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 507.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 506.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 506.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 506.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 505.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 505.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 504.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 502.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 502.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 501.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 501.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 499.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 499.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 498.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 497.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 497.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 496.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 494.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 492.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 491.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 490.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 487.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 486.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 485.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 484.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 484.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 479.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 479.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 477.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 475.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 471.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 471.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 471.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 470.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 470.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 470.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 467.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 467.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 467.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 466.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 466.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 464.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 464.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 463.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 460.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 454.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 447.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 442.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 438.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 438.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 437.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 433.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 432.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 432.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 429.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 429.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 429.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 425.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 423.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 421.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 418.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 415.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 415.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 410.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 409.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 409.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 408.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 405.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 402.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 401.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 401.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 390.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 384.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 370.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 369.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 366.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 352.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 328.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

25.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 25.6
FF:10164-103B2 76 years, female 25.6
Nucleus accumbens
Scaled Tags Per Million: 22.0
FF:10037-101F1 23-56 years, mixed 22.0
Putamen
Scaled Tags Per Million: 25.5
FF:10176-103C5 60 years, female 25.5
Globus pallidus
Scaled Tags Per Million: 20.8
FF:10175-103C4 60 years, female 21.1
FF:10161-103A8 76 years, female 20.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

238.0
Pig sample Sample description nTPM
Caudate
nTPM: 195.8
Samples: 4

Max nTPM: 214.9
Min nTPM: 166.0
Sample A Female 192.8
Sample B Female 209.3
Sample C Male 214.9
Sample D Male 166.0
Putamen
nTPM: 218.0
Samples: 4

Max nTPM: 282.8
Min nTPM: 149.7
Sample A Female 282.8
Sample B Female 149.7
Sample C Male 225.7
Sample D Male 213.7
Septum
nTPM: 238.0
Samples: 4

Max nTPM: 284.7
Min nTPM: 188.6
Sample A Female 284.7
Sample B Female 218.6
Sample C Male 260.2
Sample D Male 188.6
Ventral pallidum
nTPM: 212.9
Samples: 4

Max nTPM: 250.2
Min nTPM: 179.4
Sample A Female 179.4
Sample B Female 250.2
Sample C Male 221.9
Sample D Male 200.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

370.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 337.6
Samples: 4

Max nTPM: 375.3
Min nTPM: 324.4
Sample A Male 324.9
Sample B Male 324.4
Sample C Female 325.9
Sample D Female 375.3
Septum
nTPM: 370.8
Samples: 4

Max nTPM: 403.9
Min nTPM: 329.9
Sample A Male 368.4
Sample B Male 403.9
Sample C Female 380.8
Sample D Female 329.9
Ventral forebrain
nTPM: 340.5
Samples: 4

Max nTPM: 392.0
Min nTPM: 296.0
Sample A Male 296.0
Sample B Male 348.9
Sample C Female 392.0
Sample D Female 324.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

13.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 13.2
74819238 Antisense, RP_060315_02_C02, Mouse strain C57BL/6J (56 days, male) 14.8
68441520 Antisense, RP_041214_02_E05, Mouse strain C57BL/6J (56 days, male) 11.7
Pallidum
Expression energy: 13.7
74819238 Antisense, RP_060315_02_C02, Mouse strain C57BL/6J (56 days, male) 15.6
68441520 Antisense, RP_041214_02_E05, Mouse strain C57BL/6J (56 days, male) 11.7

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