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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Medium
Cells in molecular layer: Not detected
Purkinje cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:44.6 nTPM

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA020361
Purkinje cells Medium
Cells in granular layer Medium
Cells in molecular layer Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.6
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 31.5
1774 Male, age 80, left hemisphere 42.1
2003 Female, age 85, right hemisphere 40.9
1769 Male, age 76, right hemisphere 37.4
2055 Female, age 91, right hemisphere 31.9
1768 Female, age 72, unknown 28.9
2101 Male, age 74, right hemisphere 27.9
2006 Male, age 61, right hemisphere 23.7
1788 Male, age 55, unknown 19.0
Cerebellar nuclei
nTPM: 44.6
2882 Male, age 76, left hemisphere 64.9
2783 Female, age 72, unknown 51.6
1966 Female, age 91, left hemisphere 50.9
2177 Female, age 85, both hemispheres 50.7
2005 Male, age 80, left hemisphere 47.9
2175 Male, age 61, right hemisphere 44.0
1871 Male, age 74, unknown 40.2
1879 Male, age 55, unknown 29.8
2318 Male, age 74, left hemisphere 21.2
Flocculonodular lobe
nTPM: 26.5
1792 Male, age 74, unknown 33.5
1771 Male, age 80, left hemisphere 30.9
2176 Female, age 91, right hemisphere 30.6
1767 Male, age 76, left hemisphere 30.1
1765 Male, age 55, unknown 27.7
1835 Female, age 85, right hemisphere 20.3
2004 Male, age 61, right hemisphere 12.6
Vermis
nTPM: 31.5
1766 Male, age 55, unknown 54.6
2834 Male, age 80, left hemisphere 39.7
1778 Female, age 91, left hemisphere 33.5
1751 Male, age 74, right hemisphere 32.7
1770 Male, age 76, left hemisphere 28.9
1825 Male, age 74, unknown 28.5
1928 Female, age 72, unknown 23.7
1988 Female, age 85, left hemisphere 23.1
2460 Male, age 61, both hemispheres 18.4

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