MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:60.9 nTPM

MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi 60.9
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 38.5
2828 Female, age 72, unknown 62.3
2586 Male, age 75, left hemisphere 61.7
1827 Male, age 72, unknown 39.5
1870 Female, age 42, unknown 39.1
1830 Male, age 51, unknown 34.0
1833 Male, age 53, unknown 33.7
2666 Male, age 74, left hemisphere 31.7
2411 Female, age 72, unknown 29.5
2219 Male, age 76, both hemispheres 28.6
2019 Male, age 18, unknown 25.3
Dorsal raphe nucleus
nTPM: 42.0
2047 Male, age 72, unknown 47.7
2016 Female, age 72, unknown 45.6
1828 Male, age 53, unknown 41.6
2298 Female, age 72, unknown 39.8
2750 Male, age 76, both hemispheres 35.5
Inferior colliculus
nTPM: 37.7
1848 Female, age 42, unknown 45.3
2849 Male, age 72, unknown 45.2
1890 Male, age 53, unknown 30.3
2097 Female, age 72, unknown 30.0
Median raphe nucleus
nTPM: 30.1
2220 Male, age 76, midline 30.1
Periaquaductal grey, anterior
nTPM: 51.2
1795 Male, age 51, unknown 59.3
1947 Male, age 18, unknown 52.4
2502 Female, age 75, unknown 42.0
Periaquaductal grey, dorsal
nTPM: 53.0
2850 Male, age 76, both hemispheres 70.3
1831 Male, age 72, unknown 51.8
1840 Male, age 53, unknown 49.8
2464 Female, age 72, unknown 39.9
Periaquaductal grey, lateral
nTPM: 60.9
2140 Male, age 76, both hemispheres 66.6
2053 Male, age 18, unknown 63.5
2272 Male, age 74, both hemispheres 52.6
Pretectal area
nTPM: 53.4
2273 Male, age 74, both hemispheres 66.6
2667 Female, age 75, unknown 64.7
2825 Male, age 18, unknown 58.0
1815 Male, age 53, unknown 55.7
1816 Male, age 51, unknown 55.6
2316 Male, age 76, right hemisphere 54.7
1944 Female, age 72, unknown 53.1
1817 Female, age 42, unknown 49.7
2224 Female, age 72, unknown 45.3
2407 Male, age 75, both hemispheres 43.9
2007 Male, age 72, unknown 40.3
Red nucleus
nTPM: 39.7
2503 Female, age 72, unknown 47.2
2725 Female, age 75, unknown 46.6
2823 Male, age 76, right hemisphere 46.6
2588 Male, age 74, left hemisphere 42.3
2769 Male, age 72, unknown 41.8
2227 Male, age 72, unknown 41.6
1821 Female, age 72, unknown 40.7
1954 Female, age 42, unknown 39.9
1904 Male, age 53, unknown 38.3
1865 Male, age 51, unknown 34.5
2584 Male, age 75, left hemisphere 29.0
2785 Male, age 18, unknown 28.3
Substantia nigra
nTPM: 43.5
2699 Male, age 18, unknown 69.0
1916 Female, age 42, unknown 49.4
1851 Male, age 51, unknown 46.5
2665 Male, age 74, both hemispheres 45.4
2590 Female, age 75, unknown 42.2
1889 Female, age 72, unknown 40.9
2409 Female, age 72, unknown 39.5
2583 Male, age 75, right hemisphere 39.3
1941 Male, age 53, unknown 33.8
2241 Male, age 72, unknown 28.8
Superior colliculus
nTPM: 46.8
2664 Male, age 75, both hemispheres 69.0
1796 Male, age 53, unknown 56.5
1995 Male, age 72, unknown 52.6
2087 Female, age 72, unknown 52.1
2261 Male, age 18, unknown 47.6
1839 Male, age 51, unknown 45.0
2668 Female, age 75, unknown 38.1
1913 Female, age 42, unknown 37.7
1895 Male, age 76, right hemisphere 35.8
2587 Male, age 74, left hemisphere 34.0
Ventral tegmental area
nTPM: 40.9
2021 Male, age 53, unknown 55.5
1915 Female, age 42, unknown 43.0
2218 Male, age 76, both hemispheres 39.8
1942 Male, age 51, unknown 37.4
2410 Female, age 72, unknown 37.0
2223 Female, age 72, unknown 32.8

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