PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		108.389
Mouse brain, Intensity
Ponsi 		135.865
RNA expressioni
HPA Brain:1134.7 nTPM
FANTOM5:2609.6 Scaled Tags Per Million
Pig:754.7 nTPM
Mouse:530.4 nTPM
Allen mouse:15.6 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA014850
Medulla oblongata mean intensity 108.389
intensityi
FRONT BACK
Nucleus of the solitary tract 52.625
Raphe magnus nucleus 53.090
Cochlear nucleus 99.341
Lateral paragigantocellular nucleus 108.389
Raphe pallidus nucleus 63.190
Facial nucleus 68.431
Hypoglossal nucleus 79.483
Ambiguus nucleus 79.053
External cuneate nucleus 47.486
Inferior olivary nucleus 61.604
Raphe obscures nucleus 63.947
Dorsal motor nucleus of vagus 28.099
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 124.032
Parabrachial nucleus 83.761
Principle sensory trigeminal nucleus 129.273
Locus coeruleus 135.865
Pontine nucleus 54.700
Vestibular nucleus 107.879
Pontine reticular nucleus, oral 91.478
Lateral lemniscus 69.624
Superior paraolivary nucleus 82.802

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1134.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 286.2
1984 Male, age 76, both hemispheres 383.1
2301 Female, age 85, both hemispheres 316.4
2188 Female, age 91, both hemispheres 263.1
2090 Male, age 80, both hemispheres 182.1
Area postrema
nTPM: 143.6
2054 Male, age 76, both hemispheres 279.1
2306 Male, age 80, both hemispheres 125.5
2799 Male, age 61, both hemispheres 26.4
Dorsal cochlear nucleus
nTPM: 333.9
2802 Male, age 74, right hemisphere 487.2
2187 Female, age 91, both hemispheres 329.1
2370 Male, age 61, both hemispheres 319.5
2378 Male, age 80, both hemispheres 271.7
2058 Male, age 76, both hemispheres 262.0
Dorsal medullary reticular nucleus
nTPM: 452.7
2040 Female, age 85, both hemispheres 689.8
2373 Male, age 61, both hemispheres 362.9
2088 Male, age 76, both hemispheres 305.2
Dorsal motor vagal complex
nTPM: 342.7
2133 Female, age 91, both hemispheres 1072.3
2000 Male, age 74, unknown 429.3
2813 Female, age 72, unknown 273.4
2185 Male, age 76, both hemispheres 254.2
2844 Male, age 55, unknown 245.9
2807 Female, age 85, both hemispheres 170.9
2643 Male, age 74, both hemispheres 156.2
2797 Male, age 61, both hemispheres 139.6
Dorsal tegmental nucleus
nTPM: 310.6
2083 Male, age 80, both hemispheres 337.2
2358 Male, age 61, both hemispheres 332.5
1936 Male, age 76, left hemisphere 290.2
2326 Male, age 74, both hemispheres 282.5
Dorsolateral tegmental area
nTPM: 224.6
2654 Male, age 80, both hemispheres 284.6
2751 Female, age 85, both hemispheres 282.7
2141 Male, age 76, both hemispheres 251.7
2360 Male, age 74, both hemispheres 223.5
2337 Male, age 61, both hemispheres 80.7
Gigantocellular reticular nuclei, medullary
nTPM: 433.6
2462 Male, age 74, both hemispheres 859.9
2387 Female, age 91, both hemispheres 400.2
2310 Male, age 80, both hemispheres 378.5
2022 Male, age 76, right hemisphere 357.4
1876 Female, age 85, both hemispheres 320.2
2314 Male, age 61, both hemispheres 285.1
Gigantocellular reticular nuclei, pars
nTPM: 463.0
2168 Male, age 76, both hemispheres 692.9
2336 Male, age 61, both hemispheres 507.6
2084 Female, age 85, both hemispheres 427.3
2330 Male, age 80, both hemispheres 379.3
2706 Male, age 80, both hemispheres 307.9
Inferior olive
nTPM: 245.3
2085 Female, age 85, both hemispheres 457.2
2628 Female, age 91, both hemispheres 260.9
2178 Male, age 61, both hemispheres 181.2
2379 Male, age 80, both hemispheres 179.1
2563 Male, age 74, both hemispheres 148.2
Kolliker-Fuse nucleus
nTPM: 581.6
2163 Male, age 80, both hemispheres 1136.2
2793 Female, age 91, left hemisphere 397.4
2315 Male, age 76, right hemisphere 211.2
Lateral lemniscal nuclei
nTPM: 670.2
2453 Male, age 74, right hemisphere 1113.3
2169 Male, age 76, both hemispheres 806.6
2320 Female, age 91, left hemisphere 495.1
2746 Female, age 85, left hemisphere 492.9
2036 Male, age 80, both hemispheres 443.0
Lateral medullary reticular nucleus
nTPM: 332.7
2044 Male, age 76, both hemispheres 597.5
2374 Male, age 61, both hemispheres 405.9
2190 Female, age 85, both hemispheres 354.7
2804 Female, age 91, both hemispheres 337.0
2305 Male, age 74, both hemispheres 173.3
2852 Male, age 80, both hemispheres 127.5
Lateral parabrachial nucleus
nTPM: 357.9
2139 Female, age 85, right hemisphere 601.0
2790 Male, age 61, both hemispheres 379.8
2013 Male, age 80, both hemispheres 322.4
2792 Male, age 76, both hemispheres 128.4
Lateral vestibular nucleus
nTPM: 648.7
2184 Male, age 76, both hemispheres 1011.7
2311 Male, age 80, both hemispheres 285.7
Locus coeruleus
nTPM: 595.3
2720 Male, age 74, both hemispheres 1217.0
2123 Female, age 91, both hemispheres 875.1
2014 Male, age 55, unknown 469.6
2788 Male, age 74, unknown 465.7
1980 Male, age 76, both hemispheres 404.4
2317 Female, age 72, unknown 397.4
2162 Male, age 80, both hemispheres 337.9
Medial olivary nucleus
nTPM: 96.4
2851 Male, age 80, both hemispheres 174.4
1962 Male, age 76, both hemispheres 114.3
2138 Female, age 91, both hemispheres 68.4
1943 Male, age 61, both hemispheres 28.5
Medial parabrachial nucleus
nTPM: 378.8
2156 Male, age 61, both hemispheres 669.1
2854 Male, age 80, both hemispheres 452.2
2786 Male, age 76, both hemispheres 293.2
2170 Female, age 91, both hemispheres 277.4
2463 Female, age 85, right hemisphere 202.2
Medial periolivary nuclei
nTPM: 529.1
2171 Female, age 85, both hemispheres 775.8
2063 Male, age 76, both hemispheres 712.1
2458 Female, age 91, both hemispheres 473.7
2791 Male, age 74, right hemisphere 435.7
2081 Male, age 80, both hemispheres 248.1
Medial vestibular nucleus
nTPM: 850.9
2624 Male, age 61, both hemispheres 1453.2
2801 Male, age 74, both hemispheres 1102.7
2134 Male, age 76, both hemispheres 867.1
2803 Female, age 91, both hemispheres 772.2
2093 Male, age 80, both hemispheres 490.6
2743 Female, age 85, both hemispheres 419.3
Motor facial nucleus
nTPM: 580.3
2062 Male, age 76, both hemispheres 742.5
2365 Male, age 74, right hemisphere 733.3
2327 Male, age 80, both hemispheres 613.2
2697 Female, age 85, both hemispheres 507.3
2795 Female, age 91, both hemispheres 499.6
2126 Male, age 61, both hemispheres 385.9
Motor hypoglossal nucleus
nTPM: 784.6
2461 Male, age 61, both hemispheres 2053.4
2125 Female, age 91, both hemispheres 723.7
2132 Female, age 85, both hemispheres 572.5
2182 Male, age 80, both hemispheres 375.8
2277 Male, age 76, both hemispheres 197.6
Motor trigeminal nucleus
nTPM: 387.5
2079 Male, age 80, both hemispheres 524.2
2560 Male, age 74, both hemispheres 455.8
2321 Female, age 91, both hemispheres 358.8
2335 Male, age 61, both hemispheres 323.8
2309 Male, age 76, both hemispheres 274.8
Nuclei of the trapezoid body
nTPM: 682.5
2159 Male, age 61, both hemispheres 1084.7
1983 Male, age 76, both hemispheres 675.1
2735 Female, age 85, both hemispheres 650.8
2368 Female, age 91, both hemispheres 553.9
2166 Male, age 80, both hemispheres 447.9
Nucleus ambiguus
nTPM: 299.8
2096 Female, age 85, both hemispheres 440.3
2071 Male, age 76, both hemispheres 159.2
Nucleus cuneatus
nTPM: 348.7
2131 Male, age 76, both hemispheres 751.5
2100 Male, age 76, both hemispheres 620.5
2564 Male, age 74, both hemispheres 421.9
2376 Male, age 61, both hemispheres 337.2
2381 Male, age 80, both hemispheres 256.5
2562 Male, age 61, both hemispheres 231.6
2805 Female, age 91, both hemispheres 214.2
2808 Female, age 85, both hemispheres 171.3
2380 Male, age 80, both hemispheres 133.5
Nucleus gracilis
nTPM: 152.0
2299 Female, age 85, both hemispheres 176.1
2627 Male, age 74, both hemispheres 162.2
2382 Male, age 80, both hemispheres 117.5
Nucleus raphe magnus
nTPM: 788.0
2160 Male, age 61, both hemispheres 1210.8
2455 Male, age 74, both hemispheres 1190.4
2172 Female, age 85, both hemispheres 812.3
2328 Male, age 80, both hemispheres 556.2
2459 Female, age 91, both hemispheres 529.9
2051 Male, age 76, both hemispheres 428.3
Nucleus raphe obscurus
nTPM: 265.4
2800 Male, age 61, midline 395.4
2845 Female, age 85, midline 371.6
2142 Male, age 76, midline 29.3
Nucleus raphe pallidus
nTPM: 219.1
2183 Male, age 80, midline 373.0
1924 Male, age 61, midline 238.4
2145 Male, age 76, midline 45.9
Nucleus tractus solitarii
nTPM: 451.0
2144 Female, age 91, right hemisphere 831.6
2191 Female, age 85, both hemispheres 529.4
2307 Male, age 80, both hemispheres 242.0
2656 Male, age 76, both hemispheres 201.0
Paramedian reticular nucleus
nTPM: 518.5
2050 Female, age 85, both hemispheres 689.0
2313 Male, age 61, both hemispheres 627.8
2057 Male, age 80, both hemispheres 472.3
2052 Male, age 76, both hemispheres 285.0
Parvicellular reticular nuclei
nTPM: 505.6
2558 Male, age 74, both hemispheres 705.1
2095 Male, age 76, both hemispheres 437.6
2119 Male, age 80, both hemispheres 374.1
Parvicellular reticular nuclei, medullary
nTPM: 622.3
2091 Female, age 85, both hemispheres 817.7
2189 Female, age 91, both hemispheres 737.3
2181 Male, age 80, left hemisphere 312.0
Pedunculopontine tegmental nucleus
nTPM: 314.8
2334 Male, age 80, both hemispheres 365.8
2338 Male, age 61, both hemispheres 311.6
1921 Female, age 85, both hemispheres 266.9
Peritrigeminal nucleus
nTPM: 472.5
2136 Male, age 76, both hemispheres 518.1
2179 Male, age 61, both hemispheres 507.8
2067 Female, age 85, both hemispheres 391.5
Pontine nuclei
nTPM: 616.5
2727 Male, age 61, right hemisphere 1046.5
2787 Female, age 85, both hemispheres 798.2
1863 Male, age 55, unknown 711.9
2454 Male, age 74, left hemisphere 612.7
1968 Male, age 76, left hemisphere 606.0
2109 Female, age 72, unknown 573.3
2319 Female, age 91, both hemispheres 294.5
2115 Male, age 80, left hemisphere 288.7
Pontine raphe nucleus
nTPM: 406.7
2122 Female, age 85, midline 611.2
2853 Male, age 76, midline 202.3
Posteroventral cochlear nucleus
nTPM: 302.2
2752 Female, age 85, both hemispheres 499.3
2070 Male, age 76, both hemispheres 433.1
2371 Male, age 61, both hemispheres 337.6
2341 Male, age 80, both hemispheres 220.6
2135 Female, age 91, both hemispheres 20.6
Prepositus hypoglossal nucleus
nTPM: 475.8
2855 Female, age 85, right hemisphere 690.5
2086 Male, age 80, both hemispheres 261.2
Principal sensory trigeminal nucleus
nTPM: 708.3
2158 Male, age 61, both hemispheres 985.4
2324 Male, age 76, both hemispheres 821.5
2008 Male, age 80, left hemisphere 569.0
2367 Female, age 91, left hemisphere 457.2
Reticular pontine nucleus, caudal
nTPM: 480.7
2332 Male, age 80, right hemisphere 697.6
2092 Male, age 76, both hemispheres 502.2
2457 Female, age 91, both hemispheres 481.1
2559 Male, age 74, both hemispheres 241.8
Reticular pontine nucleus, oral
nTPM: 417.7
2361 Male, age 74, both hemispheres 616.6
2012 Female, age 85, both hemispheres 519.5
2366 Female, age 91, both hemispheres 424.4
1939 Male, age 80, both hemispheres 267.0
2167 Male, age 76, both hemispheres 260.8
Reticulotegmental nucleus
nTPM: 520.5
2322 Female, age 91, both hemispheres 616.5
2452 Male, age 74, both hemispheres 555.6
2325 Male, age 76, both hemispheres 501.8
2333 Male, age 80, both hemispheres 408.0
Spinal trigeminal nucleus, caudal
nTPM: 697.2
2390 Female, age 91, both hemispheres 2032.5
2447 Male, age 76, both hemispheres 672.5
2642 Male, age 74, both hemispheres 267.4
2308 Male, age 80, both hemispheres 258.6
2312 Male, age 61, both hemispheres 255.4
Spinal trigeminal nucleus, interpolar
nTPM: 1134.7
2625 Male, age 61, both hemispheres 3381.4
2066 Male, age 76, right hemisphere 806.0
2389 Female, age 91, both hemispheres 669.9
2033 Male, age 80, both hemispheres 426.5
2386 Female, age 85, both hemispheres 389.8
Spinal trigeminal nucleus, oral
nTPM: 702.5
2164 Male, age 80, both hemispheres 1076.9
2737 Female, age 85, both hemispheres 757.3
1978 Male, age 76, both hemispheres 273.2
Spinal vestibular nucleus
nTPM: 450.7
2186 Female, age 91, both hemispheres 586.5
2796 Male, age 61, both hemispheres 512.0
2806 Female, age 85, both hemispheres 495.5
2384 Male, age 74, both hemispheres 389.9
2780 Male, age 80, both hemispheres 377.7
2748 Male, age 76, both hemispheres 342.7
Subcoeruleus area
nTPM: 391.5
2089 Male, age 76, left hemisphere 491.8
2323 Female, age 91, left hemisphere 474.1
1958 Male, age 80, both hemispheres 465.6
2451 Male, age 74, both hemispheres 314.6
2369 Female, age 85, left hemisphere 211.5
Superior olive
nTPM: 548.2
1875 Female, age 85, both hemispheres 750.1
2364 Male, age 74, right hemisphere 545.5
2561 Female, age 91, both hemispheres 490.9
2329 Male, age 80, right hemisphere 482.0
2020 Male, age 76, both hemispheres 472.6
Superior vestibular nucleus
nTPM: 305.6
2015 Male, age 80, both hemispheres 422.4
2383 Male, age 74, both hemispheres 248.8
2061 Male, age 76, both hemispheres 245.6
Ventral medullary reticular nucleus
nTPM: 318.9
2372 Male, age 61, both hemispheres 358.1
2060 Male, age 76, both hemispheres 279.7
Ventral periolivary nuclei
nTPM: 574.1
2165 Male, age 80, both hemispheres 678.6
2130 Female, age 85, both hemispheres 646.3
2794 Female, age 91, left hemisphere 543.5
2023 Male, age 76, both hemispheres 428.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 415.3
2741 Female, age 85, both hemispheres 560.7
1986 Male, age 76, both hemispheres 502.9
2180 Male, age 61, both hemispheres 397.8
2302 Female, age 91, both hemispheres 381.1
2118 Male, age 80, both hemispheres 233.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 517.1
2449 Male, age 74, both hemispheres 929.9
2840 Female, age 85, both hemispheres 619.4
1959 Male, age 76, both hemispheres 494.2
2161 Male, age 80, both hemispheres 436.8
2456 Female, age 91, both hemispheres 392.8
2359 Male, age 61, both hemispheres 229.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 2609.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1709.3
FF:10182-103D2 60 years, female 2849.0
FF:10165-103B3 76 years, female 569.6
Medulla oblongata
Scaled Tags Per Million: 720.2
FF:10038-101F2 18-64 years, mixed 1430.3
FF:10155-103A2 76 years, female 425.0
FF:10174-103C3 60 years, female 305.3
Pons
Scaled Tags Per Million: 2609.6
FF:10033-101E6 18-54 years, mixed 2609.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 754.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 754.8
Samples: 4

Max nTPM: 1115.5
Min nTPM: 455.5
Sample A Female 766.9
Sample B Female 1115.5
Sample C Male 681.1
Sample D Male 455.5
Pons
nTPM: 623.7
Samples: 4

Max nTPM: 1036.1
Min nTPM: 319.2
Sample A Female 660.7
Sample B Female 319.2
Sample C Male 478.7
Sample D Male 1036.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 530.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 530.4
Samples: 4

Max nTPM: 550.3
Min nTPM: 513.1
Sample A Male 520.5
Sample B Male 550.3
Sample C Female 513.1
Sample D Female 537.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 15.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 15.6
73512198 Antisense, RP_050712_04_B04, Mouse strain C57BL/6J (56 days, male) 15.6
70919083 Antisense, RP_050712_04_B04, Mouse strain C57BL/6J (56 days, male) 10.8
Pons
Expression energy: 14.6
73512198 Antisense, RP_050712_04_B04, Mouse strain C57BL/6J (56 days, male) 14.6
70919083 Antisense, RP_050712_04_B04, Mouse strain C57BL/6J (56 days, male) 9.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org