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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:310.3 nTPM
HPA Brain:697.7 nTPM
GTEx:310.3 nTPM
FANTOM5:695.3 Scaled Tags Per Million
Pig:106.6 nTPM
Mouse:347.5 nTPM
Allen mouse:4.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038149Antibody HPA038150
Glial cells HighMedium
Neuronal cells Not detectedNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

697.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 302.2
2846 Female, age 79, unknown 343.4
1781 Male, age 74, unknown 342.2
2481 Female, age 94, left hemisphere 317.6
2288 Male, age 75, left hemisphere 314.1
2290 Female, age 72, unknown 296.9
2289 Male, age 61, right hemisphere 276.9
1857 Female, age 85, left hemisphere 266.7
1854 Male, age 80, left hemisphere 259.7
Globus pallidus, externus
nTPM: 697.7
2567 Female, age 72, unknown 890.4
2646 Male, age 61, right hemisphere 872.0
2395 Male, age 75, both hemispheres 585.4
1996 Male, age 80, right hemisphere 575.7
2772 Female, age 79, unknown 565.1
Globus pallidus, internus
nTPM: 634.8
2566 Female, age 72, unknown 796.3
2483 Female, age 94, right hemisphere 791.3
2111 Female, age 85, right hemisphere 635.5
2287 Male, age 75, right hemisphere 627.3
2778 Female, age 91, both hemispheres 567.3
1818 Male, age 74, unknown 542.8
2037 Male, age 80, right hemisphere 482.9
Nucleus accumbens
nTPM: 326.7
2698 Female, age 72, unknown 442.6
2391 Female, age 94, left hemisphere 402.4
2732 Male, age 80, right hemisphere 400.6
1806 Female, age 85, left hemisphere 309.7
1783 Male, age 74, unknown 289.9
2286 Male, age 75, left hemisphere 277.9
2824 Male, age 61, right hemisphere 245.3
1856 Female, age 91, right hemisphere 244.8
Nucleus basalis of Meynert
nTPM: 526.3
2569 Male, age 61, both hemispheres 944.0
2484 Female, age 94, left hemisphere 435.6
2821 Male, age 75, both hemispheres 405.5
2393 Male, age 80, right hemisphere 320.3
Nucleus of the diagonal band
nTPM: 303.4
1812 Female, age 91, both hemispheres 424.7
2195 Female, age 85, both hemispheres 295.4
2775 Male, age 80, right hemisphere 292.4
1979 Male, age 74, unknown 266.9
2029 Male, age 61, right hemisphere 237.5
Putamen
nTPM: 344.5
2647 Male, age 75, left hemisphere 507.3
2489 Female, age 72, unknown 414.5
1829 Male, age 74, unknown 367.0
2482 Female, age 94, left hemisphere 320.7
2466 Female, age 79, unknown 293.1
1937 Female, age 91, right hemisphere 291.0
1838 Male, age 80, right hemisphere 218.0
Septal nuclei
nTPM: 320.9
2394 Male, age 61, left hemisphere 428.6
2199 Male, age 80, right hemisphere 348.5
2629 Female, age 94, right hemisphere 319.1
2059 Female, age 85, both hemispheres 294.4
2009 Female, age 91, both hemispheres 290.4
1960 Male, age 74, unknown 286.4
2031 Female, age 72, unknown 278.9
Stria terminalis, bed nucleus
nTPM: 303.5
2201 Male, age 74, unknown 377.9
1974 Female, age 91, both hemispheres 331.3
2486 Female, age 94, both hemispheres 201.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

310.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 225.0
Samples: 246

Max nTPM: 810.7
Min nTPM: 91.9
Std nTPM: 100.9
Median nTPM: 200.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 810.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 688.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 578.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 523.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 512.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 505.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 491.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 477.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 468.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 467.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 466.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 431.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 423.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 418.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 416.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 413.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 412.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 403.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 399.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 392.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 382.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 377.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 360.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 349.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 348.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 339.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 335.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 328.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 325.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 325.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 322.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 319.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 318.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 317.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 317.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 310.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 305.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 304.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 300.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 298.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 298.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 292.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 287.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 286.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 286.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 282.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 279.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 278.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 278.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 277.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 276.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 274.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 273.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 269.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 269.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 269.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 266.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 264.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 263.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 263.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 263.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 259.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 257.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 256.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 251.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 250.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 249.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 249.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 245.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 244.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 243.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 242.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 242.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 237.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 236.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 236.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 236.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 236.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 234.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 234.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 234.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 231.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 230.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 230.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 230.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 229.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 229.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 229.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 228.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 226.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 225.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 225.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 223.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 223.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 221.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 221.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 220.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 219.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 219.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 219.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 219.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 218.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 217.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 215.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 215.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 214.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 213.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 210.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 209.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 209.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 208.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 207.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 207.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 206.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 205.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 205.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 204.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 204.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 203.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 202.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 202.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 201.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 201.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 200.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 199.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 199.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 199.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 199.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 197.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 196.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 195.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 193.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 192.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 192.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 191.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 191.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 190.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 190.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 189.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 189.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 189.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 188.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 186.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 186.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 185.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 181.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 181.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 178.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 178.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 178.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 176.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 175.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 174.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 173.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 172.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 172.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 172.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 171.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 170.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 168.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 168.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 168.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 168.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 167.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 167.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 167.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 166.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 165.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 165.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 164.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 164.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 164.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 163.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 162.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 161.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 160.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 160.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 160.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 160.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 159.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 159.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 158.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 158.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 158.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 157.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 157.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 157.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 157.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 156.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 154.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 153.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 152.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 152.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 152.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 151.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 151.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 150.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 150.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 149.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 148.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 147.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 147.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 147.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 146.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 146.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 146.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 146.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 144.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 142.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 142.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 141.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 140.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 139.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 139.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 138.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 137.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 137.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 136.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 136.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 135.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 135.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 135.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 134.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 133.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 133.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 133.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 132.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 132.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 131.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 127.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 127.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 125.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 125.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 125.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 125.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 124.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 123.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 122.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 122.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 119.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 117.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 111.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 109.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 107.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 106.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 91.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 215.7
Samples: 246

Max nTPM: 797.7
Min nTPM: 83.0
Std nTPM: 114.0
Median nTPM: 176.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 797.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 659.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 656.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 633.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 579.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 568.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 519.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 515.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 509.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 495.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 492.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 488.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 486.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 477.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 452.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 440.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 437.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 423.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 420.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 415.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 404.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 361.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 353.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 350.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 346.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 343.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 342.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 342.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 340.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 340.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 335.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 325.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 322.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 321.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 321.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 311.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 309.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 301.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 292.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 289.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 287.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 284.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 280.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 280.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 277.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 277.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 277.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 276.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 275.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 274.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 266.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 265.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 264.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 263.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 261.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 261.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 261.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 257.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 253.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 252.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 252.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 250.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 250.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 250.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 249.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 248.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 247.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 246.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 242.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 239.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 238.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 238.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 234.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 233.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 230.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 230.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 229.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 228.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 227.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 225.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 223.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 222.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 220.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 220.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 218.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 215.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 214.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 211.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 211.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 208.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 206.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 206.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 203.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 202.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 201.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 199.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 199.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 197.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 196.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 195.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 195.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 193.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 190.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 189.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 188.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 187.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 187.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 184.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 183.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 182.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 180.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 180.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 179.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 179.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 179.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 179.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 178.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 178.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 177.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 177.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 177.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 176.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 176.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 176.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 175.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 175.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 175.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 173.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 172.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 172.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 171.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 171.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 170.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 165.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 165.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 163.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 163.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 163.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 163.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 162.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 162.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 162.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 161.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 160.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 160.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 160.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 160.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 160.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 159.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 158.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 158.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 158.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 157.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 156.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 156.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 154.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 154.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 154.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 154.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 153.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 153.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 152.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 151.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 150.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 149.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 149.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 149.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 149.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 149.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 148.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 148.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 148.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 148.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 146.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 146.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 146.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 146.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 145.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 145.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 145.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 145.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 144.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 143.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 143.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 143.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 142.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 142.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 141.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 141.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 140.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 140.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 140.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 139.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 139.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 138.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 137.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 136.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 135.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 135.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 135.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 135.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 134.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 134.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 133.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 132.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 131.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 130.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 129.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 129.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 128.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 127.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 127.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 126.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 126.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 125.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 125.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 125.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 125.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 125.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 124.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 124.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 124.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 123.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 121.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 121.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 121.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 121.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 121.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 119.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 119.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 118.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 117.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 115.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 114.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 114.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 113.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 112.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 111.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 110.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 110.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 109.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 108.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 106.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 101.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 96.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 83.0
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Brain - Putamen (basal ganglia)
Average nTPM: 310.3
Samples: 205

Max nTPM: 1005.1
Min nTPM: 124.1
Std nTPM: 149.6
Median nTPM: 272.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1005.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 943.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 831.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 768.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 705.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 690.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 679.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 620.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 605.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 601.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 589.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 575.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 570.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 559.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 553.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 549.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 543.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 534.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 524.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 495.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 494.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 493.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 485.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 480.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 476.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 474.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 471.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 468.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 459.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 456.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 455.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 454.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 447.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 447.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 442.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 438.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 433.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 431.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 423.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 415.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 412.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 408.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 405.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 399.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 393.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 389.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 388.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 382.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 380.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 375.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 374.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 374.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 372.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 360.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 359.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 358.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 356.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 353.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 353.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 353.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 351.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 351.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 347.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 347.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 345.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 342.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 337.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 334.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 329.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 328.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 326.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 325.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 325.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 324.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 323.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 321.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 316.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 315.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 311.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 309.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 306.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 298.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 295.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 293.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 292.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 292.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 292.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 291.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 290.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 289.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 287.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 287.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 286.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 285.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 284.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 282.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 282.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 280.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 276.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 276.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 275.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 273.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 272.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 270.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 269.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 269.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 269.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 268.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 261.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 260.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 260.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 259.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 259.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 258.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 258.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 257.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 257.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 256.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 256.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 255.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 254.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 254.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 251.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 250.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 249.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 249.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 248.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 248.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 247.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 245.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 243.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 243.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 241.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 239.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 239.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 238.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 236.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 235.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 235.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 231.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 230.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 229.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 229.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 228.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 227.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 227.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 222.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 222.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 221.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 219.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 218.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 217.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 211.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 210.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 206.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 202.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 202.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 199.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 198.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 197.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 197.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 195.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 193.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 188.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 187.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 184.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 183.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 183.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 183.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 183.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 179.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 178.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 176.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 175.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 174.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 166.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 165.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 165.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 165.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 163.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 162.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 158.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 158.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 156.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 154.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 152.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 150.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 146.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 146.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 145.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 142.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 139.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 137.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 137.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 134.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 134.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 133.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 132.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 132.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 128.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 127.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 127.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 127.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 125.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 124.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

695.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 341.6
FF:10164-103B2 76 years, female 341.6
Nucleus accumbens
Scaled Tags Per Million: 695.3
FF:10037-101F1 23-56 years, mixed 695.3
Putamen
Scaled Tags Per Million: 376.9
FF:10176-103C5 60 years, female 376.9
Globus pallidus
Scaled Tags Per Million: 630.2
FF:10161-103A8 76 years, female 799.7
FF:10175-103C4 60 years, female 460.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.6
Pig sample Sample description nTPM
Caudate
nTPM: 63.9
Samples: 4

Max nTPM: 70.5
Min nTPM: 60.8
Sample A Female 60.9
Sample B Female 63.5
Sample C Male 70.5
Sample D Male 60.8
Putamen
nTPM: 97.1
Samples: 4

Max nTPM: 125.0
Min nTPM: 68.3
Sample A Female 125.0
Sample B Female 68.3
Sample C Male 91.5
Sample D Male 103.6
Septum
nTPM: 106.7
Samples: 4

Max nTPM: 152.7
Min nTPM: 74.4
Sample A Female 77.5
Sample B Female 74.4
Sample C Male 122.0
Sample D Male 152.7
Ventral pallidum
nTPM: 93.4
Samples: 4

Max nTPM: 146.0
Min nTPM: 59.3
Sample A Female 59.3
Sample B Female 79.7
Sample C Male 146.0
Sample D Male 88.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

347.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 242.7
Samples: 4

Max nTPM: 250.0
Min nTPM: 234.4
Sample A Male 234.4
Sample B Male 240.9
Sample C Female 245.4
Sample D Female 250.0
Septum
nTPM: 347.5
Samples: 4

Max nTPM: 384.4
Min nTPM: 306.6
Sample A Male 306.6
Sample B Male 384.4
Sample C Female 341.4
Sample D Female 357.5
Ventral forebrain
nTPM: 243.9
Samples: 4

Max nTPM: 250.8
Min nTPM: 236.2
Sample A Male 241.7
Sample B Male 250.8
Sample C Female 247.0
Sample D Female 236.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.8
71587919 Antisense, RP_050725_03_G05, Mouse strain C57BL/6J (56 days, male) 2.8
68845598 Antisense, RP_050224_02_B05, Mouse strain C57BL/6J (56 days, male) 2.7
Pallidum
Expression energy: 4.4
71587919 Antisense, RP_050725_03_G05, Mouse strain C57BL/6J (56 days, male) 4.9
68845598 Antisense, RP_050224_02_B05, Mouse strain C57BL/6J (56 days, male) 3.8

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