We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
746.6
nTPM
FANTOM5:
956.5
Scaled Tags Per Million
Pig:
233.9
nTPM
Allen mouse:
4.6
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
746.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 709.5
2188
Female, age 91, both hemispheres
877.1
2301
Female, age 85, both hemispheres
831.4
2090
Male, age 80, both hemispheres
695.4
1984
Male, age 76, both hemispheres
434.1
Dorsal cochlear nucleus nTPM: 702.0
2802
Male, age 74, right hemisphere
922.5
2187
Female, age 91, both hemispheres
709.0
2378
Male, age 80, both hemispheres
684.4
2370
Male, age 61, both hemispheres
642.7
2058
Male, age 76, both hemispheres
551.4
Dorsal tegmental nucleus nTPM: 632.8
2326
Male, age 74, both hemispheres
724.1
2083
Male, age 80, both hemispheres
662.0
2358
Male, age 61, both hemispheres
575.7
1936
Male, age 76, left hemisphere
569.5
Dorsolateral tegmental area nTPM: 586.1
2654
Male, age 80, both hemispheres
686.1
2337
Male, age 61, both hemispheres
652.2
2751
Female, age 85, both hemispheres
611.2
2360
Male, age 74, both hemispheres
509.8
2141
Male, age 76, both hemispheres
470.9
Kolliker-Fuse nucleus nTPM: 712.2
2793
Female, age 91, left hemisphere
850.3
2315
Male, age 76, right hemisphere
658.9
2163
Male, age 80, both hemispheres
627.5
Lateral lemniscal nuclei nTPM: 569.3
2320
Female, age 91, left hemisphere
637.3
2453
Male, age 74, right hemisphere
605.3
2036
Male, age 80, both hemispheres
587.5
2169
Male, age 76, both hemispheres
520.6
2746
Female, age 85, left hemisphere
495.8
Lateral parabrachial nucleus nTPM: 597.4
2792
Male, age 76, both hemispheres
781.7
2790
Male, age 61, both hemispheres
578.2
2013
Male, age 80, both hemispheres
564.3
2139
Female, age 85, right hemisphere
465.6
Lateral vestibular nucleus nTPM: 666.0
2311
Male, age 80, both hemispheres
723.3
2184
Male, age 76, both hemispheres
608.8
Locus coeruleus nTPM: 504.5
2720
Male, age 74, both hemispheres
607.0
2014
Male, age 55, unknown
536.6
2162
Male, age 80, both hemispheres
512.1
1980
Male, age 76, both hemispheres
484.5
2123
Female, age 91, both hemispheres
471.3
2317
Female, age 72, unknown
466.9
2788
Male, age 74, unknown
452.8
Medial parabrachial nucleus nTPM: 621.8
2170
Female, age 91, both hemispheres
735.2
2854
Male, age 80, both hemispheres
608.1
2463
Female, age 85, right hemisphere
594.5
2786
Male, age 76, both hemispheres
590.9
2156
Male, age 61, both hemispheres
580.1
Medial periolivary nuclei nTPM: 556.6
2458
Female, age 91, both hemispheres
639.7
2081
Male, age 80, both hemispheres
603.9
2063
Male, age 76, both hemispheres
538.2
2791
Male, age 74, right hemisphere
505.8
2171
Female, age 85, both hemispheres
495.5
Motor facial nucleus nTPM: 618.1
2697
Female, age 85, both hemispheres
728.7
2795
Female, age 91, both hemispheres
667.0
2126
Male, age 61, both hemispheres
655.7
2327
Male, age 80, both hemispheres
612.3
2365
Male, age 74, right hemisphere
531.5
2062
Male, age 76, both hemispheres
513.2
Motor trigeminal nucleus nTPM: 661.9
2321
Female, age 91, both hemispheres
788.6
2560
Male, age 74, both hemispheres
718.0
2309
Male, age 76, both hemispheres
609.6
2335
Male, age 61, both hemispheres
601.5
2079
Male, age 80, both hemispheres
592.0
Nuclei of the trapezoid body nTPM: 586.3
2166
Male, age 80, both hemispheres
699.8
2368
Female, age 91, both hemispheres
644.3
2159
Male, age 61, both hemispheres
582.7
1983
Male, age 76, both hemispheres
533.8
2735
Female, age 85, both hemispheres
470.9
Nucleus raphe magnus nTPM: 525.4
2328
Male, age 80, both hemispheres
614.6
2459
Female, age 91, both hemispheres
570.4
2051
Male, age 76, both hemispheres
534.7
2455
Male, age 74, both hemispheres
522.3
2172
Female, age 85, both hemispheres
464.3
2160
Male, age 61, both hemispheres
446.3
Paramedian reticular nucleus nTPM: 602.6
2052
Male, age 76, both hemispheres
624.6
2057
Male, age 80, both hemispheres
601.0
2313
Male, age 61, both hemispheres
600.1
2050
Female, age 85, both hemispheres
584.6
Pedunculopontine tegmental nucleus nTPM: 554.8
2338
Male, age 61, both hemispheres
596.4
2334
Male, age 80, both hemispheres
590.2
1921
Female, age 85, both hemispheres
477.8
Pontine nuclei nTPM: 570.0
2319
Female, age 91, both hemispheres
775.0
2115
Male, age 80, left hemisphere
632.6
2454
Male, age 74, left hemisphere
583.7
1968
Male, age 76, left hemisphere
552.1
2109
Female, age 72, unknown
538.9
1863
Male, age 55, unknown
535.7
2787
Female, age 85, both hemispheres
492.9
2727
Male, age 61, right hemisphere
448.8
Pontine raphe nucleus nTPM: 548.1
2122
Female, age 85, midline
557.1
2853
Male, age 76, midline
539.2
Posteroventral cochlear nucleus nTPM: 746.6
2135
Female, age 91, both hemispheres
974.1
2341
Male, age 80, both hemispheres
893.1
2371
Male, age 61, both hemispheres
783.7
2070
Male, age 76, both hemispheres
541.7
2752
Female, age 85, both hemispheres
540.4
Principal sensory trigeminal nucleus nTPM: 566.7
2367
Female, age 91, left hemisphere
654.8
2324
Male, age 76, both hemispheres
625.2
2158
Male, age 61, both hemispheres
507.7
2008
Male, age 80, left hemisphere
479.2
Reticular pontine nucleus, caudal nTPM: 630.4
2559
Male, age 74, both hemispheres
686.3
2457
Female, age 91, both hemispheres
656.8
2332
Male, age 80, right hemisphere
589.6
2092
Male, age 76, both hemispheres
588.9
Reticular pontine nucleus, oral nTPM: 598.4
2366
Female, age 91, both hemispheres
807.0
1939
Male, age 80, both hemispheres
559.8
2167
Male, age 76, both hemispheres
553.7
2012
Female, age 85, both hemispheres
544.8
2361
Male, age 74, both hemispheres
526.7
Reticulotegmental nucleus nTPM: 673.7
2452
Male, age 74, both hemispheres
776.3
2322
Female, age 91, both hemispheres
700.2
2333
Male, age 80, both hemispheres
649.2
2325
Male, age 76, both hemispheres
569.0
Spinal trigeminal nucleus, oral nTPM: 544.9
2164
Male, age 80, both hemispheres
686.3
2737
Female, age 85, both hemispheres
504.4
1978
Male, age 76, both hemispheres
444.2
Subcoeruleus area nTPM: 579.3
2451
Male, age 74, both hemispheres
704.8
2369
Female, age 85, left hemisphere
652.1
2089
Male, age 76, left hemisphere
535.5
1958
Male, age 80, both hemispheres
530.7
2323
Female, age 91, left hemisphere
473.3
Superior olive nTPM: 605.0
2561
Female, age 91, both hemispheres
708.2
2020
Male, age 76, both hemispheres
660.4
2329
Male, age 80, right hemisphere
645.2
1875
Female, age 85, both hemispheres
526.4
2364
Male, age 74, right hemisphere
484.9
Ventral periolivary nuclei nTPM: 587.5
2794
Female, age 91, left hemisphere
668.9
2023
Male, age 76, both hemispheres
630.2
2165
Male, age 80, both hemispheres
582.5
2130
Female, age 85, both hemispheres
468.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 565.7
2840
Female, age 85, both hemispheres
626.7
2161
Male, age 80, both hemispheres
615.7
2456
Female, age 91, both hemispheres
608.8
1959
Male, age 76, both hemispheres
544.2
2449
Male, age 74, both hemispheres
507.5
2359
Male, age 61, both hemispheres
491.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
233.9
Pig sample
Sample description
nTPM
Pons nTPM: 233.9
Samples: 4
Max nTPM: 465.1
Min nTPM: 130.7
Sample A
Female
465.1
Sample B
Female
130.7
Sample C
Male
147.0
Sample D
Male
192.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
