PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:896.3 nTPM
FANTOM5:956.5 Scaled Tags Per Million
Pig:233.9 nTPM
Mouse:403.6 nTPM
Allen mouse:4.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 896.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 709.5
2188 Female, age 91, both hemispheres 877.1
2301 Female, age 85, both hemispheres 831.4
2090 Male, age 80, both hemispheres 695.4
1984 Male, age 76, both hemispheres 434.1
Area postrema
nTPM: 896.3
2799 Male, age 61, both hemispheres 1501.1
2306 Male, age 80, both hemispheres 706.6
2054 Male, age 76, both hemispheres 481.1
Dorsal cochlear nucleus
nTPM: 702.0
2802 Male, age 74, right hemisphere 922.5
2187 Female, age 91, both hemispheres 709.0
2378 Male, age 80, both hemispheres 684.4
2370 Male, age 61, both hemispheres 642.7
2058 Male, age 76, both hemispheres 551.4
Dorsal medullary reticular nucleus
nTPM: 644.8
2373 Male, age 61, both hemispheres 724.0
2040 Female, age 85, both hemispheres 639.6
2088 Male, age 76, both hemispheres 570.9
Dorsal motor vagal complex
nTPM: 719.3
2797 Male, age 61, both hemispheres 1486.9
2643 Male, age 74, both hemispheres 838.2
2807 Female, age 85, both hemispheres 676.5
2844 Male, age 55, unknown 616.9
2185 Male, age 76, both hemispheres 589.8
2000 Male, age 74, unknown 537.2
2133 Female, age 91, both hemispheres 514.1
2813 Female, age 72, unknown 494.8
Dorsal tegmental nucleus
nTPM: 632.8
2326 Male, age 74, both hemispheres 724.1
2083 Male, age 80, both hemispheres 662.0
2358 Male, age 61, both hemispheres 575.7
1936 Male, age 76, left hemisphere 569.5
Dorsolateral tegmental area
nTPM: 586.1
2654 Male, age 80, both hemispheres 686.1
2337 Male, age 61, both hemispheres 652.2
2751 Female, age 85, both hemispheres 611.2
2360 Male, age 74, both hemispheres 509.8
2141 Male, age 76, both hemispheres 470.9
Gigantocellular reticular nuclei, medullary
nTPM: 620.0
2314 Male, age 61, both hemispheres 922.1
2387 Female, age 91, both hemispheres 704.2
2310 Male, age 80, both hemispheres 651.0
1876 Female, age 85, both hemispheres 550.4
2462 Male, age 74, both hemispheres 463.3
2022 Male, age 76, right hemisphere 429.3
Gigantocellular reticular nuclei, pars
nTPM: 668.1
2330 Male, age 80, both hemispheres 769.2
2706 Male, age 80, both hemispheres 759.5
2336 Male, age 61, both hemispheres 677.7
2084 Female, age 85, both hemispheres 644.7
2168 Male, age 76, both hemispheres 489.6
Inferior olive
nTPM: 805.0
2379 Male, age 80, both hemispheres 930.9
2628 Female, age 91, both hemispheres 830.3
2085 Female, age 85, both hemispheres 775.9
2178 Male, age 61, both hemispheres 757.5
2563 Male, age 74, both hemispheres 730.3
Kolliker-Fuse nucleus
nTPM: 712.2
2793 Female, age 91, left hemisphere 850.3
2315 Male, age 76, right hemisphere 658.9
2163 Male, age 80, both hemispheres 627.5
Lateral lemniscal nuclei
nTPM: 569.3
2320 Female, age 91, left hemisphere 637.3
2453 Male, age 74, right hemisphere 605.3
2036 Male, age 80, both hemispheres 587.5
2169 Male, age 76, both hemispheres 520.6
2746 Female, age 85, left hemisphere 495.8
Lateral medullary reticular nucleus
nTPM: 683.3
2374 Male, age 61, both hemispheres 781.9
2804 Female, age 91, both hemispheres 722.4
2852 Male, age 80, both hemispheres 712.0
2190 Female, age 85, both hemispheres 683.4
2305 Male, age 74, both hemispheres 615.4
2044 Male, age 76, both hemispheres 584.7
Lateral parabrachial nucleus
nTPM: 597.4
2792 Male, age 76, both hemispheres 781.7
2790 Male, age 61, both hemispheres 578.2
2013 Male, age 80, both hemispheres 564.3
2139 Female, age 85, right hemisphere 465.6
Lateral vestibular nucleus
nTPM: 666.0
2311 Male, age 80, both hemispheres 723.3
2184 Male, age 76, both hemispheres 608.8
Locus coeruleus
nTPM: 504.5
2720 Male, age 74, both hemispheres 607.0
2014 Male, age 55, unknown 536.6
2162 Male, age 80, both hemispheres 512.1
1980 Male, age 76, both hemispheres 484.5
2123 Female, age 91, both hemispheres 471.3
2317 Female, age 72, unknown 466.9
2788 Male, age 74, unknown 452.8
Medial olivary nucleus
nTPM: 731.9
1943 Male, age 61, both hemispheres 774.3
2138 Female, age 91, both hemispheres 761.1
1962 Male, age 76, both hemispheres 718.7
2851 Male, age 80, both hemispheres 673.6
Medial parabrachial nucleus
nTPM: 621.8
2170 Female, age 91, both hemispheres 735.2
2854 Male, age 80, both hemispheres 608.1
2463 Female, age 85, right hemisphere 594.5
2786 Male, age 76, both hemispheres 590.9
2156 Male, age 61, both hemispheres 580.1
Medial periolivary nuclei
nTPM: 556.6
2458 Female, age 91, both hemispheres 639.7
2081 Male, age 80, both hemispheres 603.9
2063 Male, age 76, both hemispheres 538.2
2791 Male, age 74, right hemisphere 505.8
2171 Female, age 85, both hemispheres 495.5
Medial vestibular nucleus
nTPM: 623.6
2624 Male, age 61, both hemispheres 748.1
2803 Female, age 91, both hemispheres 679.5
2801 Male, age 74, both hemispheres 642.4
2093 Male, age 80, both hemispheres 608.9
2134 Male, age 76, both hemispheres 534.2
2743 Female, age 85, both hemispheres 528.6
Motor facial nucleus
nTPM: 618.1
2697 Female, age 85, both hemispheres 728.7
2795 Female, age 91, both hemispheres 667.0
2126 Male, age 61, both hemispheres 655.7
2327 Male, age 80, both hemispheres 612.3
2365 Male, age 74, right hemisphere 531.5
2062 Male, age 76, both hemispheres 513.2
Motor hypoglossal nucleus
nTPM: 615.1
2182 Male, age 80, both hemispheres 742.6
2132 Female, age 85, both hemispheres 703.5
2125 Female, age 91, both hemispheres 605.9
2461 Male, age 61, both hemispheres 594.3
2277 Male, age 76, both hemispheres 429.3
Motor trigeminal nucleus
nTPM: 661.9
2321 Female, age 91, both hemispheres 788.6
2560 Male, age 74, both hemispheres 718.0
2309 Male, age 76, both hemispheres 609.6
2335 Male, age 61, both hemispheres 601.5
2079 Male, age 80, both hemispheres 592.0
Nuclei of the trapezoid body
nTPM: 586.3
2166 Male, age 80, both hemispheres 699.8
2368 Female, age 91, both hemispheres 644.3
2159 Male, age 61, both hemispheres 582.7
1983 Male, age 76, both hemispheres 533.8
2735 Female, age 85, both hemispheres 470.9
Nucleus ambiguus
nTPM: 639.6
2071 Male, age 76, both hemispheres 709.9
2096 Female, age 85, both hemispheres 569.2
Nucleus cuneatus
nTPM: 803.3
2805 Female, age 91, both hemispheres 989.8
2564 Male, age 74, both hemispheres 943.5
2380 Male, age 80, both hemispheres 886.3
2808 Female, age 85, both hemispheres 849.4
2376 Male, age 61, both hemispheres 818.1
2381 Male, age 80, both hemispheres 774.3
2562 Male, age 61, both hemispheres 772.2
2100 Male, age 76, both hemispheres 643.0
2131 Male, age 76, both hemispheres 553.0
Nucleus gracilis
nTPM: 828.0
2627 Male, age 74, both hemispheres 852.2
2382 Male, age 80, both hemispheres 836.1
2299 Female, age 85, both hemispheres 795.7
Nucleus raphe magnus
nTPM: 525.4
2328 Male, age 80, both hemispheres 614.6
2459 Female, age 91, both hemispheres 570.4
2051 Male, age 76, both hemispheres 534.7
2455 Male, age 74, both hemispheres 522.3
2172 Female, age 85, both hemispheres 464.3
2160 Male, age 61, both hemispheres 446.3
Nucleus raphe obscurus
nTPM: 796.2
2845 Female, age 85, midline 879.6
2800 Male, age 61, midline 801.3
2142 Male, age 76, midline 707.5
Nucleus raphe pallidus
nTPM: 683.1
2145 Male, age 76, midline 764.1
1924 Male, age 61, midline 660.1
2183 Male, age 80, midline 625.0
Nucleus tractus solitarii
nTPM: 480.1
2307 Male, age 80, both hemispheres 530.5
2191 Female, age 85, both hemispheres 522.2
2656 Male, age 76, both hemispheres 445.9
2144 Female, age 91, right hemisphere 421.8
Paramedian reticular nucleus
nTPM: 602.6
2052 Male, age 76, both hemispheres 624.6
2057 Male, age 80, both hemispheres 601.0
2313 Male, age 61, both hemispheres 600.1
2050 Female, age 85, both hemispheres 584.6
Parvicellular reticular nuclei
nTPM: 638.9
2558 Male, age 74, both hemispheres 649.4
2095 Male, age 76, both hemispheres 644.5
2119 Male, age 80, both hemispheres 622.8
Parvicellular reticular nuclei, medullary
nTPM: 582.5
2189 Female, age 91, both hemispheres 594.1
2181 Male, age 80, left hemisphere 584.1
2091 Female, age 85, both hemispheres 569.3
Pedunculopontine tegmental nucleus
nTPM: 554.8
2338 Male, age 61, both hemispheres 596.4
2334 Male, age 80, both hemispheres 590.2
1921 Female, age 85, both hemispheres 477.8
Peritrigeminal nucleus
nTPM: 626.5
2136 Male, age 76, both hemispheres 659.9
2179 Male, age 61, both hemispheres 611.2
2067 Female, age 85, both hemispheres 608.5
Pontine nuclei
nTPM: 570.0
2319 Female, age 91, both hemispheres 775.0
2115 Male, age 80, left hemisphere 632.6
2454 Male, age 74, left hemisphere 583.7
1968 Male, age 76, left hemisphere 552.1
2109 Female, age 72, unknown 538.9
1863 Male, age 55, unknown 535.7
2787 Female, age 85, both hemispheres 492.9
2727 Male, age 61, right hemisphere 448.8
Pontine raphe nucleus
nTPM: 548.1
2122 Female, age 85, midline 557.1
2853 Male, age 76, midline 539.2
Posteroventral cochlear nucleus
nTPM: 746.6
2135 Female, age 91, both hemispheres 974.1
2341 Male, age 80, both hemispheres 893.1
2371 Male, age 61, both hemispheres 783.7
2070 Male, age 76, both hemispheres 541.7
2752 Female, age 85, both hemispheres 540.4
Prepositus hypoglossal nucleus
nTPM: 609.7
2855 Female, age 85, right hemisphere 716.3
2086 Male, age 80, both hemispheres 503.1
Principal sensory trigeminal nucleus
nTPM: 566.7
2367 Female, age 91, left hemisphere 654.8
2324 Male, age 76, both hemispheres 625.2
2158 Male, age 61, both hemispheres 507.7
2008 Male, age 80, left hemisphere 479.2
Reticular pontine nucleus, caudal
nTPM: 630.4
2559 Male, age 74, both hemispheres 686.3
2457 Female, age 91, both hemispheres 656.8
2332 Male, age 80, right hemisphere 589.6
2092 Male, age 76, both hemispheres 588.9
Reticular pontine nucleus, oral
nTPM: 598.4
2366 Female, age 91, both hemispheres 807.0
1939 Male, age 80, both hemispheres 559.8
2167 Male, age 76, both hemispheres 553.7
2012 Female, age 85, both hemispheres 544.8
2361 Male, age 74, both hemispheres 526.7
Reticulotegmental nucleus
nTPM: 673.7
2452 Male, age 74, both hemispheres 776.3
2322 Female, age 91, both hemispheres 700.2
2333 Male, age 80, both hemispheres 649.2
2325 Male, age 76, both hemispheres 569.0
Spinal trigeminal nucleus, caudal
nTPM: 653.2
2308 Male, age 80, both hemispheres 727.1
2312 Male, age 61, both hemispheres 684.3
2642 Male, age 74, both hemispheres 671.2
2390 Female, age 91, both hemispheres 609.2
2447 Male, age 76, both hemispheres 574.2
Spinal trigeminal nucleus, interpolar
nTPM: 594.0
2033 Male, age 80, both hemispheres 635.9
2625 Male, age 61, both hemispheres 633.0
2389 Female, age 91, both hemispheres 591.4
2066 Male, age 76, right hemisphere 564.1
2386 Female, age 85, both hemispheres 545.6
Spinal trigeminal nucleus, oral
nTPM: 544.9
2164 Male, age 80, both hemispheres 686.3
2737 Female, age 85, both hemispheres 504.4
1978 Male, age 76, both hemispheres 444.2
Spinal vestibular nucleus
nTPM: 688.5
2384 Male, age 74, both hemispheres 941.1
2796 Male, age 61, both hemispheres 718.8
2806 Female, age 85, both hemispheres 705.0
2780 Male, age 80, both hemispheres 620.5
2748 Male, age 76, both hemispheres 576.4
2186 Female, age 91, both hemispheres 569.4
Subcoeruleus area
nTPM: 579.3
2451 Male, age 74, both hemispheres 704.8
2369 Female, age 85, left hemisphere 652.1
2089 Male, age 76, left hemisphere 535.5
1958 Male, age 80, both hemispheres 530.7
2323 Female, age 91, left hemisphere 473.3
Superior olive
nTPM: 605.0
2561 Female, age 91, both hemispheres 708.2
2020 Male, age 76, both hemispheres 660.4
2329 Male, age 80, right hemisphere 645.2
1875 Female, age 85, both hemispheres 526.4
2364 Male, age 74, right hemisphere 484.9
Superior vestibular nucleus
nTPM: 583.6
2015 Male, age 80, both hemispheres 603.0
2061 Male, age 76, both hemispheres 586.8
2383 Male, age 74, both hemispheres 561.0
Ventral medullary reticular nucleus
nTPM: 654.1
2372 Male, age 61, both hemispheres 776.7
2060 Male, age 76, both hemispheres 531.4
Ventral periolivary nuclei
nTPM: 587.5
2794 Female, age 91, left hemisphere 668.9
2023 Male, age 76, both hemispheres 630.2
2165 Male, age 80, both hemispheres 582.5
2130 Female, age 85, both hemispheres 468.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 654.8
2302 Female, age 91, both hemispheres 734.3
2118 Male, age 80, both hemispheres 717.9
2180 Male, age 61, both hemispheres 679.4
2741 Female, age 85, both hemispheres 572.0
1986 Male, age 76, both hemispheres 570.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 565.7
2840 Female, age 85, both hemispheres 626.7
2161 Male, age 80, both hemispheres 615.7
2456 Female, age 91, both hemispheres 608.8
1959 Male, age 76, both hemispheres 544.2
2449 Male, age 74, both hemispheres 507.5
2359 Male, age 61, both hemispheres 491.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 956.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 767.4
FF:10182-103D2 60 years, female 982.6
FF:10165-103B3 76 years, female 552.3
Medulla oblongata
Scaled Tags Per Million: 719.4
FF:10038-101F2 18-64 years, mixed 1159.5
FF:10155-103A2 76 years, female 567.0
FF:10174-103C3 60 years, female 431.7
Pons
Scaled Tags Per Million: 956.5
FF:10033-101E6 18-54 years, mixed 956.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 233.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 191.3
Samples: 4

Max nTPM: 214.8
Min nTPM: 166.6
Sample A Female 181.8
Sample B Female 166.6
Sample C Male 202.1
Sample D Male 214.8
Pons
nTPM: 233.9
Samples: 4

Max nTPM: 465.1
Min nTPM: 130.7
Sample A Female 465.1
Sample B Female 130.7
Sample C Male 147.0
Sample D Male 192.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 403.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 403.6
Samples: 4

Max nTPM: 423.0
Min nTPM: 384.6
Sample A Male 423.0
Sample B Male 384.6
Sample C Female 399.8
Sample D Female 407.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.7
71587919 Antisense, RP_050725_03_G05, Mouse strain C57BL/6J (56 days, male) 6.0
68845598 Antisense, RP_050224_02_B05, Mouse strain C57BL/6J (56 days, male) 3.4
Pons
Expression energy: 4.6
71587919 Antisense, RP_050725_03_G05, Mouse strain C57BL/6J (56 days, male) 5.3
68845598 Antisense, RP_050224_02_B05, Mouse strain C57BL/6J (56 days, male) 3.9

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