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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: High
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: High
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Low
Processes in molecular layer: High
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:29.7 nTPM
HPA Brain:469.4 nTPM
GTEx:29.7 nTPM
FANTOM5:159.9 Scaled Tags Per Million
Pig:51.5 nTPM
Mouse:42.7 nTPM
Allen mouse:5.8 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA059157
Bergmann glia - cytoplasm/membrane High
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Not detected
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane High
Granular cells - nucleus Not detected
Molecular layer - neuropil Not detected
Molecular layer cells - cytoplasm/membrane Not detected
Molecular layer cells - nucleus Not detected
Processes in granular layer Low
Processes in molecular layer High
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Not detected
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

469.4
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 224.4
2003 Female, age 85, right hemisphere 332.4
1769 Male, age 76, right hemisphere 275.0
1774 Male, age 80, left hemisphere 232.8
1788 Male, age 55, unknown 222.5
2006 Male, age 61, right hemisphere 202.8
2055 Female, age 91, right hemisphere 198.3
1768 Female, age 72, unknown 187.9
2101 Male, age 74, right hemisphere 143.8
Cerebellar nuclei
nTPM: 469.4
1871 Male, age 74, unknown 571.9
2882 Male, age 76, left hemisphere 534.9
1879 Male, age 55, unknown 521.0
2005 Male, age 80, left hemisphere 478.2
2783 Female, age 72, unknown 452.6
2177 Female, age 85, both hemispheres 452.0
2175 Male, age 61, right hemisphere 443.2
1966 Female, age 91, left hemisphere 387.3
2318 Male, age 74, left hemisphere 383.6
Flocculonodular lobe
nTPM: 237.1
1767 Male, age 76, left hemisphere 315.5
1765 Male, age 55, unknown 290.1
1771 Male, age 80, left hemisphere 250.8
2176 Female, age 91, right hemisphere 234.8
1792 Male, age 74, unknown 205.2
2004 Male, age 61, right hemisphere 186.1
1835 Female, age 85, right hemisphere 177.1
Vermis
nTPM: 213.4
1770 Male, age 76, left hemisphere 271.2
1778 Female, age 91, left hemisphere 234.7
2460 Male, age 61, both hemispheres 229.9
1766 Male, age 55, unknown 226.6
2834 Male, age 80, left hemisphere 214.4
1988 Female, age 85, left hemisphere 197.1
1825 Male, age 74, unknown 194.0
1928 Female, age 72, unknown 190.7
1751 Male, age 74, right hemisphere 161.9

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.7
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 28.9
Samples: 215

Max nTPM: 49.5
Min nTPM: 16.4
Std nTPM: 6.0
Median nTPM: 28.1
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 49.5
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 49.3
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 49.0
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 47.1
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 45.8
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 45.1
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 43.8
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 42.5
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 40.7
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 40.4
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 39.9
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 39.8
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 39.7
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 39.4
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 38.9
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 38.2
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 37.9
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 37.8
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 37.6
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 37.6
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 37.5
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 37.1
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 36.8
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 36.5
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 36.5
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 36.5
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 36.4
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 36.3
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 36.2
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 35.4
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 34.6
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 34.3
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 34.1
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 33.8
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 33.7
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 33.7
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 33.6
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 33.5
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 33.4
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 33.2
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 33.2
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 33.1
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 33.1
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 33.1
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 32.9
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 32.7
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 32.7
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 32.7
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 32.5
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 32.5
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 32.4
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 32.3
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 32.1
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 32.1
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 32.0
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 31.8
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 31.6
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 31.3
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 31.3
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 31.2
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 31.2
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 31.0
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 31.0
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 30.9
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 30.8
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 30.8
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 30.8
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 30.7
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 30.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 30.6
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 30.4
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 30.4
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 30.4
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 30.2
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 30.1
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 30.0
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 30.0
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 30.0
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 29.9
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 29.9
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 29.9
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 29.8
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 29.7
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 29.6
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 29.5
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 29.4
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 29.4
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 29.2
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 29.2
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 29.1
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 29.1
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 29.1
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 29.1
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 29.1
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 28.8
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 28.7
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 28.7
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 28.6
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 28.6
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 28.6
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 28.5
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 28.5
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 28.5
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 28.5
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 28.2
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 28.2
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 28.1
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 28.1
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 28.1
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 28.1
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 28.1
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 27.9
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 27.7
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 27.6
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 27.5
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 27.4
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 27.3
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 27.2
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 27.1
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 27.1
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 27.0
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 27.0
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 26.9
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 26.9
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 26.9
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 26.9
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 26.9
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 26.9
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 26.8
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 26.7
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 26.6
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 26.5
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 26.5
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 26.4
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 26.3
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 26.3
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 26.3
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 26.3
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 26.2
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 26.1
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 26.1
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 26.0
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 25.9
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 25.9
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 25.8
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 25.8
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 25.7
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 25.7
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 25.6
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 25.5
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 25.4
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 25.4
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 25.3
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 25.3
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 25.3
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 25.2
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 25.2
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 25.1
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 25.0
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 25.0
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 24.9
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 24.8
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 24.8
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 24.8
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 24.7
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 24.5
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 24.5
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 24.5
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 24.4
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 24.4
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 24.3
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 24.0
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 24.0
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 24.0
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 23.8
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 23.8
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 23.6
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 23.6
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 23.5
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 23.3
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 23.3
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 23.3
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 23.2
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 23.2
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 23.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 23.0
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 23.0
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 22.9
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 22.9
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 22.9
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 22.8
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 22.8
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 22.7
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 22.5
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 22.5
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 22.2
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 22.0
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 21.7
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 21.7
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 21.5
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 21.5
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 20.7
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 20.1
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 20.0
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 19.8
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 19.7
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 19.7
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 19.5
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 19.3
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 18.4
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 18.4
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 18.0
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 18.0
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 16.4
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 16.4
Show allShow less
Brain - Cerebellum
Average nTPM: 29.7
Samples: 241

Max nTPM: 60.2
Min nTPM: 19.1
Std nTPM: 4.7
Median nTPM: 29.1
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 60.2
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 49.0
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 44.5
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 40.3
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 40.3
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 38.9
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 38.7
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 38.5
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 38.4
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 38.2
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 37.9
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 37.7
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 37.5
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 37.5
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 37.4
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 37.3
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 37.1
GTEX-1192X-3226-SM-5987D 50-59 years, male 36.6
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 36.3
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 36.1
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 35.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 35.9
GTEX-11DYG-2926-SM-5H132 60-69 years, male 35.3
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 35.3
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 35.3
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 35.3
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 35.0
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 35.0
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 35.0
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 34.9
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 34.9
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 34.8
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 34.6
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 34.4
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 34.3
GTEX-145LS-3026-SM-5O99S 60-69 years, female 34.1
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 33.9
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 33.9
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 33.8
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 33.7
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 33.7
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 33.6
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 33.6
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 33.5
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 33.4
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 33.4
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 33.4
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 33.4
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 32.9
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 32.7
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 32.7
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 32.6
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 32.6
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 32.6
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 32.4
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 32.4
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 32.4
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 32.3
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 32.1
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 32.1
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 32.1
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 31.8
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 31.8
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 31.7
GTEX-14PN4-3026-SM-664O4 50-59 years, male 31.7
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 31.7
GTEX-15G19-2826-SM-6M48K 60-69 years, male 31.6
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 31.6
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 31.4
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 31.4
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 31.3
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 31.2
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 31.1
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 31.1
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 31.0
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 31.0
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 31.0
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 30.9
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 30.9
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 30.9
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 30.8
GTEX-1B933-3026-SM-731DB 50-59 years, female 30.7
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 30.7
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 30.6
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 30.6
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 30.6
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 30.5
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 30.5
GTEX-144GL-2926-SM-5O99F 50-59 years, male 30.4
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 30.2
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 30.1
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 30.0
GTEX-17EVP-2926-SM-793BU 40-49 years, male 30.0
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 30.0
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 30.0
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 30.0
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 29.9
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 29.9
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 29.9
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 29.8
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 29.8
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 29.8
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 29.8
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 29.7
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 29.7
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 29.7
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 29.6
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 29.6
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 29.6
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 29.5
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 29.5
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 29.5
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 29.5
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 29.4
GTEX-RU72-2926-SM-2TF66 50-59 years, female 29.4
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 29.3
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 29.3
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 29.2
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 29.2
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 29.2
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 29.1
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 29.1
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 29.1
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 29.1
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 29.0
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 28.9
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 28.9
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 28.9
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 28.9
GTEX-WL46-2826-SM-3LK81 50-59 years, male 28.9
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 28.9
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 28.8
GTEX-14ABY-3026-SM-664NE 50-59 years, male 28.8
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 28.8
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 28.7
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 28.6
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 28.6
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 28.6
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 28.5
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 28.5
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 28.4
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 28.4
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 28.4
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 28.4
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 28.3
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 28.2
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 28.1
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 28.1
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 28.0
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 28.0
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 27.9
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 27.9
GTEX-11NUK-3026-SM-5986K 50-59 years, male 27.8
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 27.8
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 27.8
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 27.7
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 27.7
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 27.7
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 27.7
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 27.7
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 27.6
GTEX-X261-3126-SM-4PQZC 50-59 years, male 27.6
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 27.6
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 27.5
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 27.5
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 27.5
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 27.5
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 27.5
GTEX-12126-0926-SM-5FQTW 20-29 years, male 27.4
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 27.4
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 27.4
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 27.4
GTEX-14E6D-2926-SM-664OP 50-59 years, male 27.3
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 27.3
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 27.2
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 27.1
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 27.1
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 27.0
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 26.9
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 26.7
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 26.7
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 26.7
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 26.7
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 26.7
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 26.6
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 26.6
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 26.5
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 26.4
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 26.4
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 26.1
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 26.1
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 26.1
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 26.1
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 26.1
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 25.9
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 25.8
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 25.7
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 25.7
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 25.7
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 25.6
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 25.5
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 25.5
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 25.5
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 25.5
GTEX-11EI6-2926-SM-5985U 60-69 years, male 25.4
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 25.4
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 25.4
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 25.4
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 25.3
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 25.3
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 25.1
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 25.1
GTEX-13112-2926-SM-5DUWT 50-59 years, male 24.9
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 24.9
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 24.7
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 24.5
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 24.5
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 24.4
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 24.4
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 24.3
GTEX-11ONC-3026-SM-5985W 60-69 years, male 24.2
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 24.1
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 23.8
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 23.8
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 23.8
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 23.7
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 23.6
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 23.4
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 23.2
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 23.1
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 23.0
GTEX-17HII-2926-SM-79OMK 50-59 years, male 22.7
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 22.6
GTEX-18465-2926-SM-7KFSE 50-59 years, male 22.5
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 22.5
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 22.3
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 22.3
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 22.0
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 21.0
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 20.1
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 19.1
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

159.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 159.9
FF:10083-102B2 22-68 years, mixed 160.4
FF:10166-103B4 76 years, female 159.5

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.5
Pig sample Sample description nTPM
Cerebellum
nTPM: 51.5
Samples: 4

Max nTPM: 55.4
Min nTPM: 45.9
Sample A Female 55.4
Sample B Female 54.8
Sample C Male 49.8
Sample D Male 45.9

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.7
Mouse sample Sample description nTPM
Cerebellum
nTPM: 42.7
Samples: 4

Max nTPM: 44.9
Min nTPM: 39.3
Sample A Male 44.9
Sample B Male 43.4
Sample C Female 39.3
Sample D Female 43.1

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.8
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 5.8
70300923 Antisense, RP_050607_02_G01, Mouse strain C57BL/6J (56 days, male) 5.8

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