HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:85.3 nTPM
HPA Brain:368.1 nTPM
GTEx:85.3 nTPM
FANTOM5:212.3 Scaled Tags Per Million
Pig:101.7 nTPM
Mouse:59.8 nTPM
Allen mouse:8.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059157
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 368.1
Sample id Sample description nTPM
Hippocampus
nTPM: 332.7
2529 Female, age 94, left hemisphere 389.0
2621 Female, age 67, right hemisphere 345.2
1855 Male, age 76, left hemisphere 335.5
1911 Female, age 85, right hemisphere 321.0
2148 Female, age 91, left hemisphere 311.8
1898 Male, age 80, left hemisphere 293.8
Dentate gyrus
nTPM: 333.9
2530 Female, age 94, left hemisphere 507.4
2531 Female, age 67, both hemispheres 333.2
2010 Male, age 76, both hemispheres 319.7
2246 Female, age 85, both hemispheres 307.2
2528 Male, age 74, both hemispheres 286.2
1927 Female, age 91, both hemispheres 249.6
Entorhinal gyrus
nTPM: 355.8
2686 Male, age 75, right hemisphere 448.6
2117 Female, age 91, right hemisphere 437.7
2764 Male, age 80, right hemisphere 363.5
2613 Female, age 94, left hemisphere 330.3
1787 Male, age 76, left hemisphere 283.1
1938 Female, age 85, left hemisphere 271.8
Hippocampus, CA1
nTPM: 302.9
2749 Male, age 80, left hemisphere 380.6
2527 Male, age 74, both hemispheres 309.9
2082 Female, age 91, right hemisphere 308.6
1873 Female, age 85, both hemispheres 268.5
2045 Male, age 76, both hemispheres 246.6
Hippocampus, CA2
nTPM: 310.9
1963 Male, age 80, left hemisphere 393.8
2437 Female, age 94, left hemisphere 340.1
2113 Female, age 91, right hemisphere 316.4
2249 Male, age 74, both hemispheres 290.8
1940 Female, age 85, left hemisphere 281.2
1892 Male, age 76, both hemispheres 242.8
Hippocampus, CA3
nTPM: 285.8
2137 Male, age 80, left hemisphere 325.0
1891 Female, age 85, both hemispheres 310.4
2861 Female, age 67, both hemispheres 310.4
2620 Female, age 94, left hemisphere 267.5
1867 Male, age 76, both hemispheres 253.5
2436 Male, age 74, both hemispheres 248.3
Parahippocampal cortex
nTPM: 304.9
2532 Female, age 72, left hemisphere 392.3
2692 Male, age 74, both hemispheres 366.0
2245 Female, age 91, both hemispheres 359.4
2622 Female, age 67, right hemisphere 319.3
1933 Female, age 85, both hemispheres 291.5
1990 Female, age 91, right hemisphere 289.1
2018 Male, age 76, both hemispheres 284.8
1850 Male, age 80, both hemispheres 280.3
2693 Female, age 94, both hemispheres 243.4
2250 Female, age 67, right hemisphere 223.1
Perirhinal gyrus
nTPM: 253.2
2848 Male, age 76, right hemisphere 270.6
1847 Female, age 91, left hemisphere 261.1
1794 Male, age 80, right hemisphere 257.2
2521 Female, age 94, right hemisphere 244.9
1841 Female, age 85, right hemisphere 232.1
Subiculum
nTPM: 368.1
2438 Female, age 94, left hemisphere 463.8
2042 Male, age 76, both hemispheres 387.8
1901 Male, age 80, both hemispheres 374.1
1977 Female, age 85, both hemispheres 370.2
2619 Male, age 74, both hemispheres 314.4
2729 Female, age 91, right hemisphere 298.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 85.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 85.3
Samples: 197

Max nTPM: 282.3
Min nTPM: 24.7
Std nTPM: 41.6
Median nTPM: 75.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 282.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 228.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 228.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 207.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 197.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 189.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 188.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 187.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 185.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 182.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 168.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 212.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 212.3
FF:10153-102I9 76 years, female 221.0
FF:10169-103B7 60 years, female 203.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 101.7
Pig sample Sample description nTPM
Subiculum
nTPM: 72.8
Samples: 4

Max nTPM: 82.5
Min nTPM: 62.9
Sample A Female 82.5
Sample B Female 76.7
Sample C Male 69.0
Sample D Male 62.9
Dorsal hippocampus
nTPM: 101.7
Samples: 4

Max nTPM: 129.3
Min nTPM: 58.3
Sample A Female 129.3
Sample B Female 94.2
Sample C Male 125.0
Sample D Male 58.3
Entorhinal cortex
nTPM: 67.7
Samples: 4

Max nTPM: 71.6
Min nTPM: 65.3
Sample A Female 68.1
Sample B Female 71.6
Sample C Male 65.3
Sample D Male 65.8
Ventral hippocampus
nTPM: 82.5
Samples: 4

Max nTPM: 90.7
Min nTPM: 63.6
Sample A Female 86.1
Sample B Female 63.6
Sample C Male 90.7
Sample D Male 89.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 59.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.8
Samples: 4

Max nTPM: 61.0
Min nTPM: 52.5
Sample A Male 61.0
Sample B Male 53.8
Sample C Female 59.7
Sample D Female 52.5
Hippocampal formation
nTPM: 59.8
Samples: 4

Max nTPM: 78.7
Min nTPM: 46.0
Sample A Male 46.0
Sample B Male 67.1
Sample C Female 78.7
Sample D Female 47.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.2
70300923 Antisense, RP_050607_02_G01, Mouse strain C57BL/6J (56 days, male) 8.2

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