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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:173.0 nTPM
HPA Brain:157.4 nTPM
GTEx:173.0 nTPM
FANTOM5:30.1 Scaled Tags Per Million
Pig:186.0 nTPM
Mouse:194.5 nTPM
Allen mouse:1.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040304Antibody HPA057159Antibody CAB005875
Glial cells MediumHighNot detected
Neuronal cells MediumNot detectedNot detected







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

157.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 122.6
2481 Female, age 94, left hemisphere 148.8
2846 Female, age 79, unknown 126.7
1857 Female, age 85, left hemisphere 125.8
2290 Female, age 72, unknown 123.9
2288 Male, age 75, left hemisphere 122.1
1854 Male, age 80, left hemisphere 116.7
2289 Male, age 61, right hemisphere 112.7
1781 Male, age 74, unknown 104.1
Globus pallidus, externus
nTPM: 153.8
1996 Male, age 80, right hemisphere 202.7
2772 Female, age 79, unknown 159.1
2646 Male, age 61, right hemisphere 136.8
2567 Female, age 72, unknown 135.8
2395 Male, age 75, both hemispheres 134.5
Globus pallidus, internus
nTPM: 157.4
2037 Male, age 80, right hemisphere 180.1
2566 Female, age 72, unknown 174.4
2778 Female, age 91, both hemispheres 158.1
2287 Male, age 75, right hemisphere 152.5
1818 Male, age 74, unknown 151.9
2111 Female, age 85, right hemisphere 149.2
2483 Female, age 94, right hemisphere 135.6
Nucleus accumbens
nTPM: 112.9
2698 Female, age 72, unknown 161.6
2391 Female, age 94, left hemisphere 145.3
1806 Female, age 85, left hemisphere 117.6
2732 Male, age 80, right hemisphere 114.0
2286 Male, age 75, left hemisphere 112.7
1783 Male, age 74, unknown 98.0
1856 Female, age 91, right hemisphere 90.5
2824 Male, age 61, right hemisphere 63.7
Nucleus basalis of Meynert
nTPM: 133.1
2821 Male, age 75, both hemispheres 179.7
2569 Male, age 61, both hemispheres 137.7
2484 Female, age 94, left hemisphere 108.8
2393 Male, age 80, right hemisphere 106.3
Nucleus of the diagonal band
nTPM: 86.4
1979 Male, age 74, unknown 110.3
1812 Female, age 91, both hemispheres 100.9
2195 Female, age 85, both hemispheres 84.0
2775 Male, age 80, right hemisphere 73.1
2029 Male, age 61, right hemisphere 63.6
Putamen
nTPM: 111.4
2482 Female, age 94, left hemisphere 145.0
1829 Male, age 74, unknown 122.9
2489 Female, age 72, unknown 122.7
2647 Male, age 75, left hemisphere 115.2
1937 Female, age 91, right hemisphere 94.0
1838 Male, age 80, right hemisphere 91.8
2466 Female, age 79, unknown 88.4
Septal nuclei
nTPM: 105.4
2199 Male, age 80, right hemisphere 137.8
2629 Female, age 94, right hemisphere 124.6
2394 Male, age 61, left hemisphere 109.7
2059 Female, age 85, both hemispheres 102.4
2031 Female, age 72, unknown 89.7
2009 Female, age 91, both hemispheres 88.1
1960 Male, age 74, unknown 85.2
Stria terminalis, bed nucleus
nTPM: 82.7
2201 Male, age 74, unknown 101.0
1974 Female, age 91, both hemispheres 79.7
2486 Female, age 94, both hemispheres 67.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

173.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 154.7
Samples: 246

Max nTPM: 283.8
Min nTPM: 66.8
Std nTPM: 41.2
Median nTPM: 148.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 283.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 258.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 258.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 247.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 246.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 244.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 236.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 232.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 232.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 229.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 229.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 229.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 227.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 227.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 224.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 223.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 222.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 221.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 221.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 219.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 218.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 217.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 217.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 215.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 213.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 212.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 212.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 211.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 211.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 210.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 210.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 209.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 208.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 206.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 205.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 204.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 204.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 204.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 200.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 200.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 200.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 199.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 199.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 198.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 198.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 198.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 197.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 197.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 195.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 193.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 192.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 192.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 190.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 190.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 189.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 188.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 187.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 187.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 187.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 187.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 186.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 186.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 184.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 183.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 183.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 183.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 181.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 180.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 180.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 179.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 178.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 177.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 176.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 176.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 175.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 175.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 174.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 172.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 171.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 170.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 169.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 166.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 166.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 165.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 164.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 164.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 164.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 163.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 163.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 163.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 162.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 161.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 161.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 160.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 160.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 160.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 159.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 159.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 158.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 158.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 157.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 157.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 157.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 157.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 156.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 156.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 156.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 155.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 155.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 154.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 153.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 152.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 152.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 152.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 152.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 152.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 151.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 151.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 150.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 149.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 149.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 149.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 148.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 147.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 147.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 147.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 147.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 147.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 147.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 146.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 146.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 146.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 146.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 145.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 145.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 144.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 144.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 143.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 142.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 142.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 142.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 142.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 142.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 141.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 141.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 140.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 140.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 140.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 140.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 139.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 137.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 137.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 137.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 136.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 135.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 135.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 135.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 134.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 134.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 133.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 133.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 132.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 132.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 130.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 130.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 130.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 129.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 129.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 128.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 128.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 128.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 128.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 128.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 127.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 125.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 125.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 124.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 124.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 124.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 123.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 123.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 122.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 122.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 122.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 122.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 121.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 121.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 120.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 120.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 119.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 119.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 119.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 118.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 117.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 117.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 117.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 116.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 116.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 115.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 115.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 115.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 114.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 114.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 113.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 112.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 112.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 112.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 112.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 111.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 110.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 110.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 110.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 109.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 109.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 109.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 109.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 108.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 108.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 108.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 106.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 105.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 105.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 105.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 104.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 104.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 103.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 103.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 102.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 101.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 101.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 101.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 99.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 97.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 96.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 95.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 94.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 93.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 92.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 92.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 91.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 88.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 88.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 88.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 86.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 80.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 66.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 136.4
Samples: 246

Max nTPM: 320.5
Min nTPM: 68.4
Std nTPM: 43.5
Median nTPM: 123.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 320.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 307.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 279.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 275.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 262.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 254.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 248.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 245.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 235.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 231.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 225.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 222.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 221.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 219.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 216.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 214.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 212.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 212.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 211.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 204.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 202.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 199.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 198.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 194.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 194.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 193.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 193.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 192.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 191.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 191.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 191.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 190.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 188.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 181.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 180.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 180.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 177.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 176.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 176.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 175.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 175.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 174.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 174.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 173.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 171.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 170.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 169.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 169.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 168.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 167.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 167.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 165.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 165.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 164.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 164.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 164.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 162.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 161.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 160.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 160.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 160.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 158.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 157.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 157.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 156.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 155.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 153.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 151.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 151.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 151.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 150.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 149.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 148.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 147.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 146.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 146.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 145.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 143.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 142.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 142.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 142.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 141.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 141.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 140.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 139.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 139.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 138.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 138.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 138.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 137.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 137.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 137.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 136.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 136.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 135.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 135.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 135.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 134.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 134.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 133.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 132.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 132.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 132.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 132.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 132.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 132.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 132.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 131.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 130.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 130.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 130.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 130.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 130.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 129.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 129.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 128.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 126.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 125.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 125.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 125.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 125.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 124.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 123.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 123.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 122.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 122.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 122.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 122.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 122.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 122.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 121.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 121.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 121.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 120.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 120.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 120.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 119.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 119.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 119.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 119.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 118.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 118.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 118.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 118.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 118.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 117.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 117.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 117.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 116.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 116.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 116.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 115.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 115.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 115.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 114.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 114.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 114.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 113.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 113.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 113.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 112.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 112.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 112.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 112.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 111.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 111.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 110.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 110.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 110.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 110.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 110.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 110.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 109.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 108.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 108.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 107.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 107.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 107.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 107.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 107.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 107.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 107.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 106.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 106.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 106.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 105.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 105.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 105.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 105.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 104.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 104.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 103.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 103.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 103.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 102.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 101.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 101.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 101.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 101.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 101.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 101.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 100.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 100.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 100.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 100.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 100.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 99.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 99.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 99.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 99.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 98.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 97.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 97.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 96.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 95.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 95.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 94.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 94.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 94.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 94.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 93.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 93.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 93.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 93.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 92.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 92.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 92.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 91.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 91.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 90.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 90.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 89.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 88.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 87.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 87.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 85.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 85.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 85.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 82.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 80.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 80.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 79.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 75.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 73.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 71.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 68.4
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Brain - Putamen (basal ganglia)
Average nTPM: 173.0
Samples: 205

Max nTPM: 364.7
Min nTPM: 70.1
Std nTPM: 50.4
Median nTPM: 160.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 364.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 351.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 301.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 300.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 299.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 299.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 295.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 292.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 287.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 282.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 275.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 272.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 265.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 263.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 255.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 248.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 248.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 243.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 240.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 239.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 236.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 235.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 235.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 234.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 233.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 232.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 231.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 228.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 226.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 226.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 223.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 222.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 222.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 220.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 217.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 216.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 215.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 211.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 211.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 210.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 210.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 209.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 209.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 208.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 208.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 208.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 207.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 207.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 207.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 207.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 205.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 205.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 204.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 202.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 201.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 200.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 200.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 197.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 193.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 192.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 192.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 190.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 190.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 189.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 189.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 189.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 188.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 187.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 186.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 184.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 184.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 184.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 182.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 181.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 181.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 180.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 179.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 179.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 178.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 178.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 177.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 176.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 175.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 174.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 174.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 173.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 172.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 170.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 170.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 170.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 169.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 168.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 168.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 167.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 167.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 166.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 165.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 165.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 164.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 164.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 164.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 161.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 160.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 159.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 159.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 157.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 157.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 156.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 155.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 154.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 153.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 153.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 153.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 153.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 153.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 153.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 152.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 150.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 150.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 149.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 149.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 149.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 149.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 148.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 148.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 147.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 147.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 147.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 147.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 147.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 146.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 145.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 144.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 144.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 144.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 143.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 143.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 143.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 142.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 142.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 142.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 141.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 141.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 141.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 141.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 141.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 140.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 140.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 140.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 140.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 139.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 138.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 138.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 137.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 136.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 136.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 136.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 136.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 136.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 135.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 135.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 134.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 134.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 133.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 132.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 132.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 132.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 131.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 131.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 130.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 130.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 130.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 128.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 128.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 127.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 127.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 125.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 124.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 123.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 123.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 123.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 122.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 122.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 121.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 120.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 119.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 119.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 118.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 118.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 118.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 118.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 118.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 117.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 112.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 112.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 112.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 109.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 107.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 102.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 101.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 96.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 89.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 88.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 79.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 70.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

30.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 18.8
FF:10164-103B2 76 years, female 18.8
Nucleus accumbens
Scaled Tags Per Million: 18.7
FF:10037-101F1 23-56 years, mixed 18.7
Putamen
Scaled Tags Per Million: 19.7
FF:10176-103C5 60 years, female 19.7
Globus pallidus
Scaled Tags Per Million: 30.1
FF:10161-103A8 76 years, female 38.4
FF:10175-103C4 60 years, female 21.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.0
Pig sample Sample description nTPM
Caudate
nTPM: 138.6
Samples: 4

Max nTPM: 157.2
Min nTPM: 128.1
Sample A Female 128.1
Sample B Female 134.1
Sample C Male 157.2
Sample D Male 134.8
Putamen
nTPM: 186.0
Samples: 4

Max nTPM: 219.0
Min nTPM: 145.4
Sample A Female 187.2
Sample B Female 145.4
Sample C Male 219.0
Sample D Male 192.3
Septum
nTPM: 152.8
Samples: 4

Max nTPM: 175.9
Min nTPM: 136.4
Sample A Female 160.4
Sample B Female 138.4
Sample C Male 136.4
Sample D Male 175.9
Ventral pallidum
nTPM: 155.4
Samples: 4

Max nTPM: 178.5
Min nTPM: 121.0
Sample A Female 121.0
Sample B Female 178.5
Sample C Male 144.3
Sample D Male 177.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

194.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 194.6
Samples: 4

Max nTPM: 205.1
Min nTPM: 188.5
Sample A Male 189.1
Sample B Male 195.5
Sample C Female 188.5
Sample D Female 205.1
Septum
nTPM: 123.0
Samples: 4

Max nTPM: 137.9
Min nTPM: 97.8
Sample A Male 97.8
Sample B Male 137.9
Sample C Female 128.9
Sample D Female 127.4
Ventral forebrain
nTPM: 145.9
Samples: 4

Max nTPM: 175.1
Min nTPM: 131.2
Sample A Male 131.2
Sample B Male 135.5
Sample C Female 175.1
Sample D Female 141.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.5
743 Antisense, RP_Baylor_103125, Mouse strain C57BL/6J (56 days, male) 2.2
68341460 Antisense, RP_041207_01_F02, Mouse strain C57BL/6J (56 days, male) 0.9
Pallidum
Expression energy: 0.8
743 Antisense, RP_Baylor_103125, Mouse strain C57BL/6J (56 days, male) 1.1
68341460 Antisense, RP_041207_01_F02, Mouse strain C57BL/6J (56 days, male) 0.5

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