HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:184.9 nTPM
HPA Brain:129.2 nTPM
GTEx:184.9 nTPM
FANTOM5:22.9 Scaled Tags Per Million
Pig:150.2 nTPM
Mouse:131.8 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040304Antibody HPA057159Antibody CAB005875
Glial cells LowLowLow
Neuronal cells MediumLowNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 129.2
Sample id Sample description nTPM
Hippocampus
nTPM: 129.2
2621 Female, age 67, right hemisphere 136.5
2529 Female, age 94, left hemisphere 133.3
1911 Female, age 85, right hemisphere 129.8
1898 Male, age 80, left hemisphere 126.3
1855 Male, age 76, left hemisphere 126.2
2148 Female, age 91, left hemisphere 123.2
Dentate gyrus
nTPM: 109.4
2530 Female, age 94, left hemisphere 137.0
2010 Male, age 76, both hemispheres 129.3
2531 Female, age 67, both hemispheres 105.5
2246 Female, age 85, both hemispheres 103.6
1927 Female, age 91, both hemispheres 93.4
2528 Male, age 74, both hemispheres 87.5
Entorhinal gyrus
nTPM: 102.6
2117 Female, age 91, right hemisphere 143.3
2686 Male, age 75, right hemisphere 110.4
1787 Male, age 76, left hemisphere 105.0
1938 Female, age 85, left hemisphere 94.8
2764 Male, age 80, right hemisphere 83.9
2613 Female, age 94, left hemisphere 78.3
Hippocampus, CA1
nTPM: 103.4
2527 Male, age 74, both hemispheres 121.6
1873 Female, age 85, both hemispheres 115.7
2045 Male, age 76, both hemispheres 103.6
2749 Male, age 80, left hemisphere 96.0
2082 Female, age 91, right hemisphere 80.2
Hippocampus, CA2
nTPM: 111.0
1940 Female, age 85, left hemisphere 126.2
2249 Male, age 74, both hemispheres 116.5
1963 Male, age 80, left hemisphere 112.0
2437 Female, age 94, left hemisphere 111.9
1892 Male, age 76, both hemispheres 103.5
2113 Female, age 91, right hemisphere 95.9
Hippocampus, CA3
nTPM: 107.0
1867 Male, age 76, both hemispheres 123.0
2861 Female, age 67, both hemispheres 122.5
1891 Female, age 85, both hemispheres 121.6
2436 Male, age 74, both hemispheres 102.7
2620 Female, age 94, left hemisphere 90.7
2137 Male, age 80, left hemisphere 81.3
Parahippocampal cortex
nTPM: 98.3
2018 Male, age 76, both hemispheres 119.9
2245 Female, age 91, both hemispheres 115.7
2250 Female, age 67, right hemisphere 109.5
2532 Female, age 72, left hemisphere 105.0
2692 Male, age 74, both hemispheres 103.2
1990 Female, age 91, right hemisphere 95.4
1933 Female, age 85, both hemispheres 88.7
2622 Female, age 67, right hemisphere 88.1
1850 Male, age 80, both hemispheres 84.3
2693 Female, age 94, both hemispheres 73.4
Perirhinal gyrus
nTPM: 81.1
2521 Female, age 94, right hemisphere 90.1
2848 Male, age 76, right hemisphere 84.4
1841 Female, age 85, right hemisphere 79.8
1847 Female, age 91, left hemisphere 77.9
1794 Male, age 80, right hemisphere 73.0
Subiculum
nTPM: 119.3
2042 Male, age 76, both hemispheres 163.2
1901 Male, age 80, both hemispheres 121.5
2438 Female, age 94, left hemisphere 116.6
2619 Male, age 74, both hemispheres 108.4
2729 Female, age 91, right hemisphere 105.0
1977 Female, age 85, both hemispheres 101.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 184.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 184.9
Samples: 197

Max nTPM: 395.9
Min nTPM: 90.0
Std nTPM: 54.1
Median nTPM: 175.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 395.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 336.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 329.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 328.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 326.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 325.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 319.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 316.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 313.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 312.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 307.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 22.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.9
FF:10169-103B7 60 years, female 23.8
FF:10153-102I9 76 years, female 22.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 150.2
Pig sample Sample description nTPM
Subiculum
nTPM: 120.6
Samples: 4

Max nTPM: 144.7
Min nTPM: 100.2
Sample A Female 144.7
Sample B Female 112.2
Sample C Male 100.2
Sample D Male 125.2
Dorsal hippocampus
nTPM: 150.2
Samples: 4

Max nTPM: 181.7
Min nTPM: 121.5
Sample A Female 181.7
Sample B Female 123.9
Sample C Male 173.8
Sample D Male 121.5
Entorhinal cortex
nTPM: 113.6
Samples: 4

Max nTPM: 132.5
Min nTPM: 93.6
Sample A Female 112.4
Sample B Female 132.5
Sample C Male 115.7
Sample D Male 93.6
Ventral hippocampus
nTPM: 126.1
Samples: 4

Max nTPM: 141.1
Min nTPM: 106.3
Sample A Female 120.7
Sample B Female 106.3
Sample C Male 141.1
Sample D Male 136.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 131.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 101.0
Samples: 4

Max nTPM: 111.3
Min nTPM: 94.1
Sample A Male 99.4
Sample B Male 99.1
Sample C Female 111.3
Sample D Female 94.1
Hippocampal formation
nTPM: 131.8
Samples: 4

Max nTPM: 145.6
Min nTPM: 125.4
Sample A Male 129.3
Sample B Male 126.8
Sample C Female 145.6
Sample D Female 125.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
743 Antisense, RP_Baylor_103125, Mouse strain C57BL/6J (56 days, male) 4.5
68341460 Antisense, RP_041207_01_F02, Mouse strain C57BL/6J (56 days, male) 1.5

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