We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
535.6
nTPM
FANTOM5:
838.6
Scaled Tags Per Million
Pig:
482.5
nTPM
Allen mouse:
2.3
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
535.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 362.1
1984
Male, age 76, both hemispheres
445.2
2090
Male, age 80, both hemispheres
377.3
2301
Female, age 85, both hemispheres
316.4
2188
Female, age 91, both hemispheres
309.6
Dorsal cochlear nucleus nTPM: 437.2
2058
Male, age 76, both hemispheres
528.7
2370
Male, age 61, both hemispheres
479.1
2802
Male, age 74, right hemisphere
434.8
2187
Female, age 91, both hemispheres
377.8
2378
Male, age 80, both hemispheres
365.5
Dorsal tegmental nucleus nTPM: 481.1
2358
Male, age 61, both hemispheres
589.0
2083
Male, age 80, both hemispheres
495.9
1936
Male, age 76, left hemisphere
438.3
2326
Male, age 74, both hemispheres
401.3
Dorsolateral tegmental area nTPM: 484.5
2360
Male, age 74, both hemispheres
493.8
2654
Male, age 80, both hemispheres
492.4
2337
Male, age 61, both hemispheres
487.8
2141
Male, age 76, both hemispheres
478.4
2751
Female, age 85, both hemispheres
470.1
Kolliker-Fuse nucleus nTPM: 464.8
2315
Male, age 76, right hemisphere
671.1
2163
Male, age 80, both hemispheres
446.7
2793
Female, age 91, left hemisphere
276.7
Lateral lemniscal nuclei nTPM: 410.3
2169
Male, age 76, both hemispheres
525.5
2036
Male, age 80, both hemispheres
472.6
2453
Male, age 74, right hemisphere
405.2
2746
Female, age 85, left hemisphere
396.9
2320
Female, age 91, left hemisphere
251.5
Lateral parabrachial nucleus nTPM: 466.4
2139
Female, age 85, right hemisphere
552.8
2013
Male, age 80, both hemispheres
442.1
2792
Male, age 76, both hemispheres
441.7
2790
Male, age 61, both hemispheres
428.9
Lateral vestibular nucleus nTPM: 421.0
2184
Male, age 76, both hemispheres
466.7
2311
Male, age 80, both hemispheres
375.4
Locus coeruleus nTPM: 535.6
2123
Female, age 91, both hemispheres
662.0
2014
Male, age 55, unknown
633.2
2317
Female, age 72, unknown
620.8
1980
Male, age 76, both hemispheres
518.1
2788
Male, age 74, unknown
485.3
2720
Male, age 74, both hemispheres
418.9
2162
Male, age 80, both hemispheres
411.2
Medial parabrachial nucleus nTPM: 434.5
2156
Male, age 61, both hemispheres
480.9
2170
Female, age 91, both hemispheres
446.7
2463
Female, age 85, right hemisphere
427.8
2854
Male, age 80, both hemispheres
410.4
2786
Male, age 76, both hemispheres
406.5
Medial periolivary nuclei nTPM: 454.1
2063
Male, age 76, both hemispheres
583.0
2171
Female, age 85, both hemispheres
561.1
2791
Male, age 74, right hemisphere
463.0
2081
Male, age 80, both hemispheres
367.2
2458
Female, age 91, both hemispheres
296.1
Motor facial nucleus nTPM: 437.5
2062
Male, age 76, both hemispheres
626.5
2795
Female, age 91, both hemispheres
533.7
2365
Male, age 74, right hemisphere
467.9
2327
Male, age 80, both hemispheres
341.4
2126
Male, age 61, both hemispheres
336.5
2697
Female, age 85, both hemispheres
318.7
Motor trigeminal nucleus nTPM: 359.2
2079
Male, age 80, both hemispheres
431.9
2335
Male, age 61, both hemispheres
396.7
2309
Male, age 76, both hemispheres
376.2
2560
Male, age 74, both hemispheres
326.3
2321
Female, age 91, both hemispheres
265.0
Nuclei of the trapezoid body nTPM: 503.9
1983
Male, age 76, both hemispheres
614.8
2735
Female, age 85, both hemispheres
563.1
2159
Male, age 61, both hemispheres
530.0
2368
Female, age 91, both hemispheres
412.6
2166
Male, age 80, both hemispheres
398.9
Nucleus raphe magnus nTPM: 459.4
2160
Male, age 61, both hemispheres
547.6
2455
Male, age 74, both hemispheres
525.7
2172
Female, age 85, both hemispheres
486.1
2051
Male, age 76, both hemispheres
473.7
2328
Male, age 80, both hemispheres
396.4
2459
Female, age 91, both hemispheres
326.6
Paramedian reticular nucleus nTPM: 484.9
2050
Female, age 85, both hemispheres
540.3
2057
Male, age 80, both hemispheres
522.5
2313
Male, age 61, both hemispheres
467.5
2052
Male, age 76, both hemispheres
409.4
Pedunculopontine tegmental nucleus nTPM: 459.1
2338
Male, age 61, both hemispheres
477.7
2334
Male, age 80, both hemispheres
451.1
1921
Female, age 85, both hemispheres
448.4
Pontine nuclei nTPM: 482.6
1863
Male, age 55, unknown
771.2
2109
Female, age 72, unknown
572.6
2787
Female, age 85, both hemispheres
522.8
2727
Male, age 61, right hemisphere
515.8
1968
Male, age 76, left hemisphere
510.3
2115
Male, age 80, left hemisphere
366.4
2454
Male, age 74, left hemisphere
325.1
2319
Female, age 91, both hemispheres
276.9
Pontine raphe nucleus nTPM: 490.0
2122
Female, age 85, midline
507.8
2853
Male, age 76, midline
472.3
Posteroventral cochlear nucleus nTPM: 404.6
2752
Female, age 85, both hemispheres
481.9
2070
Male, age 76, both hemispheres
467.7
2371
Male, age 61, both hemispheres
449.5
2341
Male, age 80, both hemispheres
342.4
2135
Female, age 91, both hemispheres
281.4
Principal sensory trigeminal nucleus nTPM: 411.6
2158
Male, age 61, both hemispheres
495.1
2324
Male, age 76, both hemispheres
451.8
2008
Male, age 80, left hemisphere
446.8
2367
Female, age 91, left hemisphere
252.5
Reticular pontine nucleus, caudal nTPM: 383.7
2092
Male, age 76, both hemispheres
515.8
2332
Male, age 80, right hemisphere
406.8
2457
Female, age 91, both hemispheres
316.8
2559
Male, age 74, both hemispheres
295.7
Reticular pontine nucleus, oral nTPM: 399.5
1939
Male, age 80, both hemispheres
520.5
2012
Female, age 85, both hemispheres
470.2
2167
Male, age 76, both hemispheres
428.6
2361
Male, age 74, both hemispheres
308.7
2366
Female, age 91, both hemispheres
269.6
Reticulotegmental nucleus nTPM: 440.6
2333
Male, age 80, both hemispheres
476.3
2325
Male, age 76, both hemispheres
462.1
2322
Female, age 91, both hemispheres
445.1
2452
Male, age 74, both hemispheres
378.8
Spinal trigeminal nucleus, oral nTPM: 398.3
2737
Female, age 85, both hemispheres
436.1
1978
Male, age 76, both hemispheres
388.8
2164
Male, age 80, both hemispheres
370.2
Subcoeruleus area nTPM: 436.1
2323
Female, age 91, left hemisphere
470.3
1958
Male, age 80, both hemispheres
457.7
2369
Female, age 85, left hemisphere
447.4
2089
Male, age 76, left hemisphere
408.9
2451
Male, age 74, both hemispheres
396.3
Superior olive nTPM: 428.8
2364
Male, age 74, right hemisphere
508.8
1875
Female, age 85, both hemispheres
499.3
2020
Male, age 76, both hemispheres
463.0
2329
Male, age 80, right hemisphere
366.8
2561
Female, age 91, both hemispheres
306.2
Ventral periolivary nuclei nTPM: 437.7
2165
Male, age 80, both hemispheres
518.3
2130
Female, age 85, both hemispheres
504.7
2023
Male, age 76, both hemispheres
445.1
2794
Female, age 91, left hemisphere
282.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 428.6
2359
Male, age 61, both hemispheres
501.8
1959
Male, age 76, both hemispheres
474.8
2840
Female, age 85, both hemispheres
426.8
2161
Male, age 80, both hemispheres
412.4
2449
Male, age 74, both hemispheres
409.5
2456
Female, age 91, both hemispheres
346.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
482.5
Pig sample
Sample description
nTPM
Pons nTPM: 482.5
Samples: 4
Max nTPM: 629.7
Min nTPM: 359.3
Sample A
Female
485.0
Sample B
Female
359.3
Sample C
Male
456.1
Sample D
Male
629.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
