We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ACTB
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • ACTB
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1016.6 nTPM
HPA Brain:2155.8 nTPM
GTEx:1016.6 nTPM
Pig:2196.5 nTPM
Mouse:690.8 nTPM
Allen mouse:24.4 Expression energy

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2155.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 1599.0
2226 Male, age 75, left hemisphere 1814.6
1961 Female, age 42, unknown 1383.5
Dorsomedial nucleus
nTPM: 1396.2
1989 Male, age 62, unknown 1571.8
2017 Female, age 42, unknown 1420.5
2041 Female, age 72, unknown 1196.2
Lateral hypothalamic area
nTPM: 2155.8
2271 Male, age 75, both hemispheres 2703.1
2228 Male, age 66, unknown 2499.8
1791 Male, age 80, right hemisphere 2149.6
2412 Male, age 62, unknown 1270.8
Mammillary body
nTPM: 1901.3
1834 Female, age 42, unknown 1972.8
2413 Male, age 66, unknown 1965.2
1923 Female, age 72, unknown 1934.2
1945 Male, age 80, right hemisphere 1829.0
1948 Female, age 72, unknown 1805.5
Paraventricular nucleus
nTPM: 1632.4
2700 Male, age 62, unknown 1632.4
Preoptic area
nTPM: 1526.5
2414 Female, age 72, unknown 1712.5
1861 Female, age 42, unknown 1464.5
1907 Male, age 80, right hemisphere 1402.6
Supraoptic nucleus
nTPM: 1909.1
2043 Male, age 62, unknown 2119.1
1894 Female, age 72, unknown 1915.5
2835 Female, age 72, unknown 1692.7
Ventromedial nucleus
nTPM: 1433.3
1982 Female, age 72, unknown 1556.1
1822 Female, age 42, unknown 1310.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1016.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 1016.6
Samples: 202

Max nTPM: 3442.1
Min nTPM: 515.8
Std nTPM: 315.8
Median nTPM: 937.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 3442.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 2440.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 2086.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 1804.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1744.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1582.2
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 1544.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 1529.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 1526.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1515.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1505.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 1496.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1489.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1480.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1475.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 1454.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 1452.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 1447.7
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 1411.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 1410.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1398.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 1383.6
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 1291.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 1272.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1271.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 1261.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 1258.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 1253.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 1253.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 1242.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 1239.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 1233.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1229.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1225.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 1224.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 1197.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 1180.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1180.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 1175.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 1175.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 1174.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 1166.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 1159.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 1155.9
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 1152.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 1151.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 1149.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 1147.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 1135.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 1131.7
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 1127.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 1126.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 1119.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1116.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 1108.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1108.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 1107.2
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 1098.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 1096.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 1096.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1095.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 1095.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 1093.2
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 1086.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 1086.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1073.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1069.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1063.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 1063.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 1057.8
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 1051.5
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 1051.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 1044.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 1042.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 1042.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 1039.9
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 1039.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1030.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 1030.0
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 1028.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 1028.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 1028.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 1027.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1027.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 1024.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 1020.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 1007.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 997.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 989.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 983.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 973.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 973.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 971.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 968.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 966.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 958.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 955.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 949.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 943.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 939.4
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 938.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 937.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 935.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 932.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 931.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 931.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 927.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 926.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 925.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 921.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 917.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 910.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 906.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 906.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 904.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 902.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 902.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 898.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 898.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 898.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 897.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 897.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 897.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 896.8
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 896.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 894.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 891.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 888.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 888.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 887.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 885.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 884.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 884.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 883.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 883.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 882.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 879.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 872.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 871.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 871.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 867.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 861.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 860.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 859.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 859.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 858.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 853.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 845.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 840.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 830.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 829.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 828.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 827.6
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 826.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 822.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 819.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 809.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 806.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 803.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 801.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 799.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 792.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 780.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 779.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 777.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 775.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 774.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 771.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 770.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 767.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 765.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 765.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 762.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 761.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 760.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 757.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 756.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 755.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 754.9
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 747.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 746.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 742.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 732.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 731.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 725.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 721.5
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 710.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 709.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 707.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 688.9
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 677.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 675.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 672.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 668.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 667.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 664.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 647.4
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 640.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 614.5
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 587.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 584.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 515.8
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2196.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 2196.5
Samples: 4

Max nTPM: 2967.3
Min nTPM: 1538.5
Sample A Female 2967.3
Sample B Female 2139.4
Sample C Male 2140.8
Sample D Male 1538.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

690.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 690.8
Samples: 4

Max nTPM: 712.1
Min nTPM: 643.0
Sample A Male 708.8
Sample B Male 712.1
Sample C Female 643.0
Sample D Female 699.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

24.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 24.4
74881516 Antisense, RP_060315_04_C04, Mouse strain C57BL/6J (56 days, male) 26.7
81600126 Antisense, RP_080306_03_B07, Mouse strain C57BL/6J (56 days, male) 25.7
69514684 Antisense, RP_050419_03_H03, Mouse strain C57BL/6J (56 days, male) 20.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org