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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:2152.7 nTPM
GTEx:2152.7 nTPM
FANTOM5:3635.6 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041264Antibody HPA041271Antibody CAB002621
Squamous epithelial cells MediumNot detectedNot detected





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2152.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 2152.7
Samples: 156

Max nTPM: 5823.9
Min nTPM: 562.4
Std nTPM: 948.9
Median nTPM: 2039.6
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 5823.9
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 5409.8
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 5359.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 4530.7
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 4435.1
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 4339.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 4197.1
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 4009.4
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 4006.3
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 3968.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 3804.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 3774.5
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 3760.3
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 3711.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 3574.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 3526.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 3307.9
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 3240.8
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 3084.9
GTEX-14PKU-1326-SM-6871B 40-49 years, female 3068.8
GTEX-QCQG-1226-SM-48U23 50-59 years, female 2985.9
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 2976.6
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 2947.8
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 2912.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 2867.6
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 2803.9
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 2797.7
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 2796.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 2748.5
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 2732.2
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 2723.8
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 2676.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 2665.6
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 2659.5
GTEX-S341-1226-SM-4AD5S 40-49 years, female 2659.2
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 2630.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 2626.8
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 2620.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 2602.7
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 2596.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 2568.2
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 2557.8
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 2541.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 2519.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 2510.3
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 2508.0
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 2455.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 2455.3
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 2431.4
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 2429.0
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 2427.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 2387.1
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 2386.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 2381.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 2374.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 2354.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 2335.2
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 2330.6
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 2290.5
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 2288.4
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 2263.3
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 2262.6
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 2252.1
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 2246.1
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 2235.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 2213.1
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 2203.4
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 2172.9
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 2156.9
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 2141.5
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 2137.9
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 2105.5
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 2091.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 2090.9
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 2061.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 2056.5
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2049.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 2044.6
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 2034.6
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 2009.9
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1993.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1969.0
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1935.7
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 1923.9
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1899.6
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 1889.0
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 1841.0
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 1841.0
GTEX-11I78-2026-SM-5987C 50-59 years, female 1834.7
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1833.1
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 1827.4
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 1780.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1765.4
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1760.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1756.0
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 1744.7
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 1735.8
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1730.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1723.2
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1705.7
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 1689.0
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1687.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1680.9
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 1669.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1612.7
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1600.3
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1592.1
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 1585.3
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 1567.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1549.5
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1536.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1536.3
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1497.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 1483.5
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1481.8
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1480.3
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 1450.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1444.4
GTEX-16NPV-2526-SM-6M483 50-59 years, female 1434.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1423.9
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1414.9
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1411.6
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1396.3
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 1389.6
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 1353.4
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1353.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1344.4
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 1339.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 1318.4
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 1298.6
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 1296.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1274.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1270.3
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1250.5
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1227.6
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 1223.8
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1193.3
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 1183.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1181.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 1180.3
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1179.9
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1165.8
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 1101.9
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 1055.4
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1010.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1005.8
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 998.5
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 978.2
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 974.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 951.8
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 896.8
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 852.4
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 836.0
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 802.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 721.0
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 562.4
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3635.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 3635.6
FF:10204-103F6 68 years, female 3635.6

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