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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in glomeruli:
Low
Cells in tubules:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1276.8
nTPM
HPA:
1064.4
nTPM
GTEx:
1276.8
nTPM
FANTOM5:
4748.0
Scaled Tags Per Million
KIDNEY - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA041264
Antibody HPA041271
Antibody CAB002621
Cells in glomeruli
Low
Low
Medium
Cells in tubules
Medium
Medium
Low
KIDNEY - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1064.4
Female, age 58
Kidney sample 55 nTPM: 766.5
Cell types%
Cells in tubules:
60
Cells in glomeruli:
20
Fibroblasts:
5
Other cell types:
15
Female, age 67
Kidney sample 56 nTPM: 799.2
Cell types%
Cells in tubules:
70
Cells in glomeruli:
15
Fibroblasts:
10
Other cell types:
5
Female, age 55
Kidney sample 57 nTPM: 1153.6
Cell types%
Cells in tubules:
80
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
5
Male, age 46
Kidney sample 58 nTPM: 955.7
Cell types%
Cells in tubules:
60
Cells in glomeruli:
25
Fibroblasts:
5
Other cell types:
10
Female, age 57
Kidney sample 358 nTPM: 1703
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Male, age 78
Kidney sample 377 nTPM: 1347.3
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
20
Male, age 73
Kidney sample 380 nTPM: 1275.5
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Female, age 59
Kidney sample 394 nTPM: 598
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
15
Female, age 48
Kidney sample 414 nTPM: 980.6
Cell types%
Cells in tubules:
60
Cells in glomeruli:
5
Fibroblasts:
10
Other cell types:
25
KIDNEY - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1276.8
GTEx sample id
Sample description
nTPM
Kidney - Cortex Average nTPM: 1276.8
Samples: 85
Max nTPM: 2203.6
Min nTPM: 554.1
Std nTPM: 423.0
Median nTPM: 1212.3
GTEX-ZLFU-0926-SM-5P9F8
40-49 years, male
2203.6
GTEX-1MUQO-2526-SM-E9TJN
60-69 years, male
2146.4
GTEX-ZYFG-1626-SM-5GZYY
60-69 years, female
2131.5
GTEX-145MN-0326-SM-5QGQI
30-39 years, male
2124.7
GTEX-11TTK-1926-SM-5PNW8
60-69 years, female
2061.2
GTEX-QLQW-1626-SM-CMKFE
30-39 years, male
2036.5
GTEX-14C5O-2026-SM-5YYB1
60-69 years, male
2036.2
GTEX-17F97-1926-SM-7IGM4
50-59 years, male
2007.0
GTEX-1N2EF-1426-SM-EXUSH
60-69 years, male
2001.3
GTEX-1399S-0526-SM-5IJG8
30-39 years, female
1995.5
GTEX-1EKGG-2226-SM-7IGOA
60-69 years, male
1904.0
GTEX-1IKK5-0926-SM-A9G2U
60-69 years, male
1884.8
GTEX-1AX8Z-2326-SM-731CR
60-69 years, male
1838.9
GTEX-1R9PO-1626-SM-E6CPT
60-69 years, female
1815.2
GTEX-ZVZP-0926-SM-5GIDB
50-59 years, male
1776.0
GTEX-1H3VY-1926-SM-9JGHJ
50-59 years, male
1773.7
GTEX-XPVG-0526-SM-4B65N
50-59 years, male
1757.4
GTEX-11GS4-2326-SM-5A5KS
60-69 years, male
1683.2
GTEX-1A3MW-2226-SM-73KUX
60-69 years, female
1664.0
GTEX-13NYB-1726-SM-5N9G2
40-49 years, male
1544.6
GTEX-13O1R-2526-SM-5N9FW
60-69 years, male
1501.8
GTEX-QDVN-1626-SM-48TZC
50-59 years, male
1476.0
GTEX-Y5V6-2026-SM-5IFHO
60-69 years, male
1463.3
GTEX-14E6D-2526-SM-5YYA9
50-59 years, male
1462.1
GTEX-14C39-2126-SM-664OH
40-49 years, male
1422.7
GTEX-1HB9E-1826-SM-D4P33
50-59 years, male
1413.7
GTEX-12696-0926-SM-5FQTV
60-69 years, male
1377.0
GTEX-1I1GP-1926-SM-CNNQU
50-59 years, male
1373.8
GTEX-15DYW-2026-SM-6AJBD
60-69 years, female
1362.8
GTEX-1JMPZ-1226-SM-ARU8Y
30-39 years, male
1354.3
GTEX-1E2YA-1626-SM-7MGXS
50-59 years, male
1350.3
GTEX-ZYT6-2226-SM-5GIC9
30-39 years, male
1329.5
GTEX-1NV8Z-2226-SM-EXOJ2
60-69 years, male
1319.1
GTEX-1PWST-2226-SM-EVR3G
70-79 years, male
1309.9
GTEX-147F4-2626-SM-5Q5CS
50-59 years, male
1301.6
GTEX-1KWVE-0826-SM-CXZKO
30-39 years, male
1290.5
GTEX-P4QS-1126-SM-3NMD5
60-69 years, male
1262.1
GTEX-1JMLX-1526-SM-AHZ3N
50-59 years, male
1259.2
GTEX-1GF9V-1926-SM-9JGHE
60-69 years, male
1252.3
GTEX-1K9T9-1826-SM-CXZK2
50-59 years, female
1239.9
GTEX-1CB4J-1926-SM-7MGX8
60-69 years, male
1234.7
GTEX-1IL2V-1826-SM-ARU7R
70-79 years, male
1225.4
GTEX-1BAJH-1826-SM-731DA
70-79 years, male
1212.3
GTEX-13OVI-1126-SM-5KLZF
60-69 years, female
1189.2
GTEX-1N2DW-1826-SM-EAZ54
50-59 years, male
1161.4
GTEX-1JJ6O-2526-SM-AHZ3J
60-69 years, male
1156.5
GTEX-T6MN-1826-SM-EXOHN
50-59 years, male
1142.5
GTEX-1GN1U-2126-SM-AHZ4J
50-59 years, female
1134.5
GTEX-17F96-1926-SM-7MGWY
70-79 years, male
1118.4
GTEX-1JMQK-1926-SM-CJI3B
60-69 years, male
1103.4
GTEX-1497J-0826-SM-5NQAJ
60-69 years, male
1090.7
GTEX-REY6-1826-SM-EAZAT
60-69 years, male
1078.7
GTEX-13OVL-1826-SM-5KLZR
50-59 years, male
1070.5
GTEX-13RTJ-2226-SM-5S2Q1
60-69 years, male
1051.8
GTEX-1LG7Y-2726-SM-D5OVW
50-59 years, male
1051.5
GTEX-O5YV-1226-SM-EV795
60-69 years, female
1048.1
GTEX-1OJC4-2326-SM-DTXA5
50-59 years, female
1046.7
GTEX-1C6VQ-2326-SM-7IGN1
50-59 years, male
1043.5
GTEX-1GMR3-2426-SM-7MXV2
40-49 years, male
1016.1
GTEX-ZDXO-0226-SM-4WKH7
60-69 years, male
1015.3
GTEX-1GTWX-1826-SM-9QEHG
60-69 years, male
993.7
GTEX-1GF9W-1326-SM-7P8PX
60-69 years, male
993.4
GTEX-13OW6-1826-SM-5N9F9
50-59 years, male
991.5
GTEX-11OF3-1326-SM-5N9FJ
60-69 years, male
978.2
GTEX-1A8FM-2026-SM-7P8RN
50-59 years, female
977.3
GTEX-1QP6S-1526-SM-EXUSG
40-49 years, male
974.6
GTEX-1HCU7-1826-SM-A9G2A
50-59 years, male
970.4
GTEX-16MT8-1926-SM-7EPGL
60-69 years, female
964.9
GTEX-15CHQ-2126-SM-6871M
60-69 years, male
959.4
GTEX-1F48J-2226-SM-7MXTN
50-59 years, female
954.0
GTEX-13112-2126-SM-5GCO4
50-59 years, male
928.2
GTEX-1JMQJ-1726-SM-E9U4V
50-59 years, male
887.9
GTEX-Y5V5-1226-SM-EYYVP
60-69 years, female
853.4
GTEX-ZE9C-1426-SM-4WKGM
60-69 years, male
845.9
GTEX-1H3NZ-2126-SM-9WPQ6
60-69 years, male
816.6
GTEX-1J1OQ-1426-SM-AHZ3P
40-49 years, female
748.2
GTEX-RN64-1626-SM-48FD7
50-59 years, male
745.5
GTEX-ZC5H-1726-SM-5HL7X
40-49 years, female
731.4
GTEX-12WSG-0826-SM-5EQ5A
50-59 years, female
715.4
GTEX-17HHY-2326-SM-7KFSR
50-59 years, male
682.1
GTEX-T5JC-1526-SM-4DM68
20-29 years, male
672.6
GTEX-1HBPI-2026-SM-CE6RZ
50-59 years, male
654.5
GTEX-S33H-1426-SM-EZ6L7
30-39 years, male
641.7
GTEX-NPJ8-2226-SM-3TW8D
40-49 years, male
596.6
GTEX-QDT8-1726-SM-EYYV6
30-39 years, female
554.1
Show allShow less
Kidney - Medulla Average nTPM: 1153.5
Samples: 4
Max nTPM: 1435.8
Min nTPM: 649.2
Std nTPM: 301.7
Median nTPM: 1264.5
GTEX-RU72-1926-SM-EAZ3F
50-59 years, female
1435.8
GTEX-TKQ2-0626-SM-EZ6LB
50-59 years, male
1317.2
GTEX-T5JC-1626-SM-EZ6KW
20-29 years, male
1211.9
GTEX-R55E-2026-SM-EZ6L1
20-29 years, male
649.2
KIDNEY - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
