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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:597.7 nTPM
HPA Brain:723.9 nTPM
GTEx:597.7 nTPM
FANTOM5:1663.2 Scaled Tags Per Million
Pig:1078.8 nTPM
Mouse:952.5 nTPM
Allen mouse:16.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB002058
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

723.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 723.9
2481 Female, age 94, left hemisphere 983.9
2846 Female, age 79, unknown 796.1
1781 Male, age 74, unknown 712.4
2290 Female, age 72, unknown 698.2
2289 Male, age 61, right hemisphere 685.3
2288 Male, age 75, left hemisphere 673.7
1857 Female, age 85, left hemisphere 670.6
1854 Male, age 80, left hemisphere 570.9
Globus pallidus, externus
nTPM: 661.5
2395 Male, age 75, both hemispheres 795.3
2772 Female, age 79, unknown 794.1
2646 Male, age 61, right hemisphere 674.7
1996 Male, age 80, right hemisphere 649.9
2567 Female, age 72, unknown 393.6
Globus pallidus, internus
nTPM: 649.5
2287 Male, age 75, right hemisphere 822.8
2483 Female, age 94, right hemisphere 817.9
2778 Female, age 91, both hemispheres 760.8
1818 Male, age 74, unknown 643.6
2037 Male, age 80, right hemisphere 596.8
2566 Female, age 72, unknown 463.0
2111 Female, age 85, right hemisphere 441.5
Nucleus accumbens
nTPM: 713.1
2391 Female, age 94, left hemisphere 1054.4
2286 Male, age 75, left hemisphere 786.9
2698 Female, age 72, unknown 764.5
1856 Female, age 91, right hemisphere 734.7
1806 Female, age 85, left hemisphere 652.6
1783 Male, age 74, unknown 637.5
2732 Male, age 80, right hemisphere 580.2
2824 Male, age 61, right hemisphere 493.6
Nucleus basalis of Meynert
nTPM: 626.4
2484 Female, age 94, left hemisphere 708.4
2569 Male, age 61, both hemispheres 631.5
2821 Male, age 75, both hemispheres 602.9
2393 Male, age 80, right hemisphere 562.7
Nucleus of the diagonal band
nTPM: 615.2
1812 Female, age 91, both hemispheres 857.0
2775 Male, age 80, right hemisphere 669.2
2195 Female, age 85, both hemispheres 641.3
1979 Male, age 74, unknown 525.8
2029 Male, age 61, right hemisphere 383.0
Putamen
nTPM: 639.9
2482 Female, age 94, left hemisphere 879.3
2466 Female, age 79, unknown 733.1
1829 Male, age 74, unknown 694.3
1937 Female, age 91, right hemisphere 659.5
1838 Male, age 80, right hemisphere 583.8
2647 Male, age 75, left hemisphere 540.6
2489 Female, age 72, unknown 388.7
Septal nuclei
nTPM: 664.8
2031 Female, age 72, unknown 859.5
2009 Female, age 91, both hemispheres 792.9
1960 Male, age 74, unknown 763.4
2199 Male, age 80, right hemisphere 640.7
2629 Female, age 94, right hemisphere 624.2
2394 Male, age 61, left hemisphere 521.3
2059 Female, age 85, both hemispheres 451.8
Stria terminalis, bed nucleus
nTPM: 533.7
1974 Female, age 91, both hemispheres 664.9
2201 Male, age 74, unknown 515.8
2486 Female, age 94, both hemispheres 420.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

597.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 586.5
Samples: 246

Max nTPM: 3349.9
Min nTPM: 286.8
Std nTPM: 345.5
Median nTPM: 495.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 3349.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 2619.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 2075.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 2054.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 1911.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1522.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1508.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1410.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1407.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1208.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1186.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1143.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1118.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1107.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1107.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1100.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1097.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1077.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 971.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 947.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 945.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 936.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 932.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 914.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 892.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 887.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 859.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 830.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 815.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 812.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 795.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 794.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 776.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 764.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 758.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 748.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 734.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 722.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 718.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 718.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 703.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 702.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 699.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 687.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 676.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 675.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 674.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 647.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 641.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 641.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 633.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 631.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 629.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 628.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 627.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 620.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 617.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 617.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 616.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 613.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 612.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 609.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 607.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 601.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 601.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 596.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 594.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 593.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 584.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 581.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 577.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 575.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 572.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 567.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 563.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 561.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 561.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 559.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 559.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 558.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 556.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 551.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 549.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 548.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 547.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 546.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 542.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 538.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 537.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 535.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 535.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 535.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 534.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 533.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 533.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 531.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 529.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 526.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 522.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 521.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 521.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 518.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 517.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 516.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 514.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 514.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 513.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 513.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 511.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 510.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 510.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 506.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 504.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 504.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 503.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 502.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 501.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 501.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 501.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 496.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 496.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 495.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 495.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 495.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 494.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 494.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 494.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 493.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 493.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 492.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 491.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 491.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 488.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 487.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 484.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 484.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 479.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 479.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 478.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 477.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 473.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 472.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 470.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 469.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 466.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 464.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 463.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 462.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 462.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 461.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 461.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 460.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 459.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 459.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 457.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 456.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 455.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 451.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 450.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 447.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 447.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 447.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 446.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 446.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 442.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 440.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 439.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 438.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 437.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 435.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 435.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 435.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 433.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 431.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 430.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 430.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 427.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 427.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 426.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 422.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 417.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 415.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 415.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 415.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 414.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 413.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 413.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 411.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 410.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 409.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 407.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 407.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 407.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 406.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 404.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 401.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 401.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 397.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 397.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 396.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 395.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 395.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 394.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 394.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 392.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 391.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 391.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 389.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 386.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 385.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 383.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 381.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 381.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 378.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 377.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 376.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 375.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 375.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 373.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 372.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 372.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 371.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 368.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 367.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 366.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 364.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 362.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 361.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 357.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 356.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 355.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 352.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 348.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 337.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 337.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 332.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 331.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 331.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 324.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 322.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 320.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 310.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 307.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 299.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 290.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 286.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 597.7
Samples: 246

Max nTPM: 2466.8
Min nTPM: 257.5
Std nTPM: 294.9
Median nTPM: 533.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 2466.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 2119.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 2048.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1948.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1769.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 1503.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 1340.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 1309.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1271.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1248.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 1187.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 1181.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 1150.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 1139.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 1077.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 1031.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 1001.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 985.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 956.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 935.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 924.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 919.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 869.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 866.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 848.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 833.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 828.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 821.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 818.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 812.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 804.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 787.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 772.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 771.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 765.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 758.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 756.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 748.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 747.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 731.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 726.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 718.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 717.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 714.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 711.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 705.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 690.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 688.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 685.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 682.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 682.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 677.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 674.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 666.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 657.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 657.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 654.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 650.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 649.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 647.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 646.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 642.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 638.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 635.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 633.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 629.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 627.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 626.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 625.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 622.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 621.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 621.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 616.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 616.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 616.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 615.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 613.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 612.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 611.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 611.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 611.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 604.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 603.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 603.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 597.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 596.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 594.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 591.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 591.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 591.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 588.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 586.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 583.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 581.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 581.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 579.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 574.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 573.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 572.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 569.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 567.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 565.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 565.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 562.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 561.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 560.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 559.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 558.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 558.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 558.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 556.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 554.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 554.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 553.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 552.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 550.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 545.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 544.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 540.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 540.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 540.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 536.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 534.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 532.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 530.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 523.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 521.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 520.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 519.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 519.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 518.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 514.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 508.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 508.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 508.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 506.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 500.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 499.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 497.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 497.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 497.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 494.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 491.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 490.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 490.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 488.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 488.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 488.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 487.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 486.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 483.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 483.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 483.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 482.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 478.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 478.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 477.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 475.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 474.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 474.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 469.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 468.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 467.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 465.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 462.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 460.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 459.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 457.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 453.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 452.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 450.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 449.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 447.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 447.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 442.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 442.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 442.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 441.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 439.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 437.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 436.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 435.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 434.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 433.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 430.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 430.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 429.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 428.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 428.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 427.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 426.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 426.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 426.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 424.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 424.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 421.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 419.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 419.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 417.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 414.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 412.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 412.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 411.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 410.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 408.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 408.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 406.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 401.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 399.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 395.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 394.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 393.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 391.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 389.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 388.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 387.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 386.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 380.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 379.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 373.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 371.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 371.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 369.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 368.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 367.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 364.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 362.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 359.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 356.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 355.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 354.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 352.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 351.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 346.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 345.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 334.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 327.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 316.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 309.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 292.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 289.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 275.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 272.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 267.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 265.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 257.5
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Brain - Putamen (basal ganglia)
Average nTPM: 550.1
Samples: 205

Max nTPM: 1879.6
Min nTPM: 243.9
Std nTPM: 252.5
Median nTPM: 481.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1879.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 1615.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1611.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1453.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1401.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1361.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1348.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 1316.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1090.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1062.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 1055.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1042.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1010.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 992.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 977.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 960.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 882.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 879.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 875.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 874.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 873.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 866.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 860.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 853.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 743.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 734.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 713.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 701.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 690.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 678.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 677.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 676.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 676.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 673.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 671.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 663.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 655.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 653.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 653.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 653.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 643.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 634.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 632.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 629.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 620.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 620.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 618.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 614.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 609.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 595.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 586.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 584.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 582.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 582.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 573.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 569.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 567.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 561.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 555.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 553.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 549.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 544.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 541.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 540.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 539.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 534.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 534.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 531.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 531.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 529.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 525.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 522.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 519.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 516.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 514.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 512.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 511.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 509.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 509.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 508.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 508.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 508.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 508.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 507.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 506.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 506.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 504.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 503.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 502.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 501.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 497.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 496.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 495.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 495.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 493.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 492.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 491.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 488.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 486.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 484.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 484.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 483.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 481.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 478.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 477.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 474.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 471.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 470.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 468.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 468.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 467.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 466.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 464.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 464.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 464.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 463.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 455.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 451.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 447.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 446.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 446.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 445.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 445.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 444.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 444.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 444.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 444.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 444.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 443.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 442.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 438.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 438.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 438.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 437.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 435.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 431.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 428.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 426.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 425.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 424.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 422.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 420.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 419.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 418.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 418.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 416.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 416.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 415.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 413.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 412.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 409.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 408.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 407.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 407.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 403.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 403.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 403.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 402.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 402.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 402.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 401.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 401.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 401.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 397.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 397.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 394.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 390.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 386.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 385.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 385.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 384.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 383.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 383.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 383.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 382.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 375.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 375.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 374.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 374.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 367.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 366.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 362.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 351.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 350.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 349.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 347.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 347.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 346.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 344.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 339.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 336.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 334.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 332.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 329.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 328.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 324.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 324.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 321.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 319.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 316.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 315.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 295.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 291.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 275.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 243.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1663.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1404.3
FF:10164-103B2 76 years, female 1404.3
Nucleus accumbens
Scaled Tags Per Million: 962.6
FF:10037-101F1 23-56 years, mixed 962.6
Putamen
Scaled Tags Per Million: 1663.2
FF:10176-103C5 60 years, female 1663.2
Globus pallidus
Scaled Tags Per Million: 1416.9
FF:10161-103A8 76 years, female 1732.1
FF:10175-103C4 60 years, female 1101.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1078.8
Pig sample Sample description nTPM
Caudate
nTPM: 813.6
Samples: 4

Max nTPM: 884.6
Min nTPM: 756.9
Sample A Female 808.5
Sample B Female 804.3
Sample C Male 884.6
Sample D Male 756.9
Putamen
nTPM: 1078.8
Samples: 4

Max nTPM: 1271.2
Min nTPM: 865.4
Sample A Female 1124.3
Sample B Female 865.4
Sample C Male 1271.2
Sample D Male 1054.4
Septum
nTPM: 879.0
Samples: 4

Max nTPM: 968.5
Min nTPM: 780.0
Sample A Female 878.8
Sample B Female 780.0
Sample C Male 968.5
Sample D Male 888.8
Ventral pallidum
nTPM: 921.4
Samples: 4

Max nTPM: 995.3
Min nTPM: 790.7
Sample A Female 790.7
Sample B Female 909.8
Sample C Male 995.3
Sample D Male 989.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

952.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 697.7
Samples: 4

Max nTPM: 734.4
Min nTPM: 645.3
Sample A Male 699.5
Sample B Male 645.3
Sample C Female 734.4
Sample D Female 711.4
Septum
nTPM: 952.5
Samples: 4

Max nTPM: 989.5
Min nTPM: 929.1
Sample A Male 931.4
Sample B Male 929.1
Sample C Female 989.5
Sample D Female 959.9
Ventral forebrain
nTPM: 778.0
Samples: 4

Max nTPM: 803.8
Min nTPM: 755.1
Sample A Male 755.5
Sample B Male 803.8
Sample C Female 755.1
Sample D Female 797.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 15.7
69012681 Antisense, RP_050309_01_C05, Mouse strain C57BL/6J (56 days, male) 15.7
Pallidum
Expression energy: 16.4
69012681 Antisense, RP_050309_01_C05, Mouse strain C57BL/6J (56 days, male) 16.4

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