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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1023.3
nTPM
FANTOM5:
2311.8
Scaled Tags Per Million
Pig:
1222.2
nTPM
Allen mouse:
14.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1023.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 721.7
1984
Male, age 76, both hemispheres
821.9
2188
Female, age 91, both hemispheres
774.0
2090
Male, age 80, both hemispheres
666.3
2301
Female, age 85, both hemispheres
624.6
Dorsal cochlear nucleus nTPM: 667.6
2187
Female, age 91, both hemispheres
780.0
2802
Male, age 74, right hemisphere
705.8
2370
Male, age 61, both hemispheres
660.8
2378
Male, age 80, both hemispheres
641.2
2058
Male, age 76, both hemispheres
550.2
Dorsal tegmental nucleus nTPM: 718.6
2358
Male, age 61, both hemispheres
793.6
2083
Male, age 80, both hemispheres
770.1
2326
Male, age 74, both hemispheres
749.4
1936
Male, age 76, left hemisphere
561.0
Dorsolateral tegmental area nTPM: 718.7
2751
Female, age 85, both hemispheres
820.9
2654
Male, age 80, both hemispheres
764.8
2360
Male, age 74, both hemispheres
745.3
2337
Male, age 61, both hemispheres
666.3
2141
Male, age 76, both hemispheres
596.3
Kolliker-Fuse nucleus nTPM: 705.3
2163
Male, age 80, both hemispheres
808.5
2793
Female, age 91, left hemisphere
757.1
2315
Male, age 76, right hemisphere
550.3
Lateral lemniscal nuclei nTPM: 706.3
2169
Male, age 76, both hemispheres
859.0
2746
Female, age 85, left hemisphere
719.9
2036
Male, age 80, both hemispheres
682.1
2453
Male, age 74, right hemisphere
639.9
2320
Female, age 91, left hemisphere
630.8
Lateral parabrachial nucleus nTPM: 681.7
2139
Female, age 85, right hemisphere
851.7
2013
Male, age 80, both hemispheres
717.5
2790
Male, age 61, both hemispheres
599.8
2792
Male, age 76, both hemispheres
558.0
Lateral vestibular nucleus nTPM: 753.9
2184
Male, age 76, both hemispheres
757.3
2311
Male, age 80, both hemispheres
750.5
Locus coeruleus nTPM: 1023.3
2014
Male, age 55, unknown
1424.9
2788
Male, age 74, unknown
1226.6
2123
Female, age 91, both hemispheres
1180.5
2317
Female, age 72, unknown
927.8
2720
Male, age 74, both hemispheres
920.0
1980
Male, age 76, both hemispheres
767.6
2162
Male, age 80, both hemispheres
715.5
Medial parabrachial nucleus nTPM: 754.0
2170
Female, age 91, both hemispheres
865.6
2854
Male, age 80, both hemispheres
835.9
2463
Female, age 85, right hemisphere
829.2
2156
Male, age 61, both hemispheres
637.4
2786
Male, age 76, both hemispheres
601.7
Medial periolivary nuclei nTPM: 772.9
2171
Female, age 85, both hemispheres
1081.7
2063
Male, age 76, both hemispheres
807.7
2791
Male, age 74, right hemisphere
780.9
2081
Male, age 80, both hemispheres
620.6
2458
Female, age 91, both hemispheres
573.6
Motor facial nucleus nTPM: 709.1
2062
Male, age 76, both hemispheres
828.1
2697
Female, age 85, both hemispheres
783.5
2365
Male, age 74, right hemisphere
767.9
2795
Female, age 91, both hemispheres
649.9
2126
Male, age 61, both hemispheres
628.7
2327
Male, age 80, both hemispheres
596.5
Motor trigeminal nucleus nTPM: 624.8
2079
Male, age 80, both hemispheres
675.3
2560
Male, age 74, both hemispheres
649.8
2335
Male, age 61, both hemispheres
631.2
2321
Female, age 91, both hemispheres
600.1
2309
Male, age 76, both hemispheres
567.7
Nuclei of the trapezoid body nTPM: 713.0
2735
Female, age 85, both hemispheres
927.9
1983
Male, age 76, both hemispheres
774.1
2166
Male, age 80, both hemispheres
661.4
2159
Male, age 61, both hemispheres
623.4
2368
Female, age 91, both hemispheres
577.9
Nucleus raphe magnus nTPM: 736.8
2172
Female, age 85, both hemispheres
1000.1
2455
Male, age 74, both hemispheres
773.2
2160
Male, age 61, both hemispheres
722.3
2328
Male, age 80, both hemispheres
662.3
2459
Female, age 91, both hemispheres
642.8
2051
Male, age 76, both hemispheres
620.1
Paramedian reticular nucleus nTPM: 835.5
2050
Female, age 85, both hemispheres
1107.7
2057
Male, age 80, both hemispheres
786.9
2052
Male, age 76, both hemispheres
728.5
2313
Male, age 61, both hemispheres
719.1
Pedunculopontine tegmental nucleus nTPM: 773.0
2334
Male, age 80, both hemispheres
816.6
1921
Female, age 85, both hemispheres
798.8
2338
Male, age 61, both hemispheres
703.6
Pontine nuclei nTPM: 813.6
1863
Male, age 55, unknown
1139.8
2109
Female, age 72, unknown
952.1
2787
Female, age 85, both hemispheres
944.6
2454
Male, age 74, left hemisphere
862.0
2319
Female, age 91, both hemispheres
731.0
2727
Male, age 61, right hemisphere
687.5
1968
Male, age 76, left hemisphere
651.2
2115
Male, age 80, left hemisphere
540.4
Pontine raphe nucleus nTPM: 887.0
2122
Female, age 85, midline
974.6
2853
Male, age 76, midline
799.4
Posteroventral cochlear nucleus nTPM: 732.2
2752
Female, age 85, both hemispheres
850.4
2371
Male, age 61, both hemispheres
779.1
2135
Female, age 91, both hemispheres
748.2
2341
Male, age 80, both hemispheres
738.1
2070
Male, age 76, both hemispheres
545.2
Principal sensory trigeminal nucleus nTPM: 690.9
2008
Male, age 80, left hemisphere
759.7
2367
Female, age 91, left hemisphere
697.1
2324
Male, age 76, both hemispheres
690.6
2158
Male, age 61, both hemispheres
616.0
Reticular pontine nucleus, caudal nTPM: 672.8
2559
Male, age 74, both hemispheres
719.0
2092
Male, age 76, both hemispheres
676.2
2457
Female, age 91, both hemispheres
670.5
2332
Male, age 80, right hemisphere
625.6
Reticular pontine nucleus, oral nTPM: 802.0
2012
Female, age 85, both hemispheres
943.9
2361
Male, age 74, both hemispheres
881.2
1939
Male, age 80, both hemispheres
829.2
2366
Female, age 91, both hemispheres
691.6
2167
Male, age 76, both hemispheres
664.2
Reticulotegmental nucleus nTPM: 722.8
2325
Male, age 76, both hemispheres
820.0
2322
Female, age 91, both hemispheres
714.5
2333
Male, age 80, both hemispheres
686.6
2452
Male, age 74, both hemispheres
670.2
Spinal trigeminal nucleus, oral nTPM: 669.7
2737
Female, age 85, both hemispheres
800.5
2164
Male, age 80, both hemispheres
716.2
1978
Male, age 76, both hemispheres
492.4
Subcoeruleus area nTPM: 688.2
1958
Male, age 80, both hemispheres
797.6
2323
Female, age 91, left hemisphere
759.1
2369
Female, age 85, left hemisphere
711.7
2451
Male, age 74, both hemispheres
613.2
2089
Male, age 76, left hemisphere
559.5
Superior olive nTPM: 741.8
1875
Female, age 85, both hemispheres
973.1
2364
Male, age 74, right hemisphere
835.5
2020
Male, age 76, both hemispheres
686.8
2329
Male, age 80, right hemisphere
627.6
2561
Female, age 91, both hemispheres
586.2
Ventral periolivary nuclei nTPM: 737.3
2130
Female, age 85, both hemispheres
925.2
2165
Male, age 80, both hemispheres
761.8
2023
Male, age 76, both hemispheres
705.8
2794
Female, age 91, left hemisphere
556.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 740.4
2359
Male, age 61, both hemispheres
966.8
2840
Female, age 85, both hemispheres
903.0
2449
Male, age 74, both hemispheres
721.9
2161
Male, age 80, both hemispheres
667.7
1959
Male, age 76, both hemispheres
614.9
2456
Female, age 91, both hemispheres
567.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1222.2
Pig sample
Sample description
nTPM
Pons nTPM: 1222.2
Samples: 4
Max nTPM: 1334.5
Min nTPM: 1036.4
Sample A
Female
1245.4
Sample B
Female
1036.4
Sample C
Male
1272.3
Sample D
Male
1334.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
