We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPS5
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPS5
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:593.8 nTPM
HPA Brain:313.2 nTPM
GTEx:593.8 nTPM
FANTOM5:254.4 Scaled Tags Per Million
Pig:193.9 nTPM
Mouse:763.4 nTPM
Allen mouse:5.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055878Antibody HPA061979
Glial cells Not detectedMedium
Neuronal cells MediumMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

313.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 247.8
2846 Female, age 79, unknown 299.5
2290 Female, age 72, unknown 278.7
1857 Female, age 85, left hemisphere 269.1
1854 Male, age 80, left hemisphere 258.4
2481 Female, age 94, left hemisphere 244.6
1781 Male, age 74, unknown 243.4
2288 Male, age 75, left hemisphere 196.6
2289 Male, age 61, right hemisphere 192.3
Globus pallidus, externus
nTPM: 313.2
1996 Male, age 80, right hemisphere 373.5
2772 Female, age 79, unknown 363.1
2646 Male, age 61, right hemisphere 290.4
2395 Male, age 75, both hemispheres 274.6
2567 Female, age 72, unknown 264.5
Globus pallidus, internus
nTPM: 312.3
2483 Female, age 94, right hemisphere 411.6
2287 Male, age 75, right hemisphere 332.1
2037 Male, age 80, right hemisphere 312.7
2778 Female, age 91, both hemispheres 298.0
2566 Female, age 72, unknown 284.0
1818 Male, age 74, unknown 277.7
2111 Female, age 85, right hemisphere 270.0
Nucleus accumbens
nTPM: 251.5
1783 Male, age 74, unknown 293.4
1806 Female, age 85, left hemisphere 284.0
1856 Female, age 91, right hemisphere 275.8
2698 Female, age 72, unknown 257.7
2732 Male, age 80, right hemisphere 254.1
2391 Female, age 94, left hemisphere 216.8
2824 Male, age 61, right hemisphere 215.4
2286 Male, age 75, left hemisphere 214.7
Nucleus basalis of Meynert
nTPM: 275.2
2569 Male, age 61, both hemispheres 362.6
2484 Female, age 94, left hemisphere 272.8
2393 Male, age 80, right hemisphere 237.0
2821 Male, age 75, both hemispheres 228.2
Nucleus of the diagonal band
nTPM: 194.0
1979 Male, age 74, unknown 223.7
1812 Female, age 91, both hemispheres 218.1
2775 Male, age 80, right hemisphere 201.4
2195 Female, age 85, both hemispheres 168.8
2029 Male, age 61, right hemisphere 158.1
Putamen
nTPM: 247.8
2466 Female, age 79, unknown 304.5
1937 Female, age 91, right hemisphere 263.3
2647 Male, age 75, left hemisphere 262.1
2482 Female, age 94, left hemisphere 250.9
1838 Male, age 80, right hemisphere 238.5
2489 Female, age 72, unknown 237.1
1829 Male, age 74, unknown 178.3
Septal nuclei
nTPM: 206.7
2199 Male, age 80, right hemisphere 230.7
2394 Male, age 61, left hemisphere 228.0
2031 Female, age 72, unknown 226.1
1960 Male, age 74, unknown 221.7
2059 Female, age 85, both hemispheres 199.7
2009 Female, age 91, both hemispheres 193.0
2629 Female, age 94, right hemisphere 147.8
Stria terminalis, bed nucleus
nTPM: 176.8
1974 Female, age 91, both hemispheres 202.6
2201 Male, age 74, unknown 183.1
2486 Female, age 94, both hemispheres 144.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

593.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 483.8
Samples: 246

Max nTPM: 1312.0
Min nTPM: 223.5
Std nTPM: 141.7
Median nTPM: 455.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1312.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1170.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 963.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 957.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 864.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 824.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 813.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 812.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 795.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 788.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 781.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 772.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 768.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 699.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 697.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 687.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 682.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 674.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 671.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 663.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 660.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 653.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 651.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 649.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 647.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 642.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 640.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 638.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 637.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 630.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 622.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 620.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 606.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 604.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 604.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 603.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 599.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 598.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 598.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 596.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 593.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 589.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 586.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 582.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 580.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 579.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 577.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 577.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 571.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 566.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 562.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 562.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 555.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 555.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 551.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 550.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 549.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 549.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 549.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 547.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 546.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 546.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 545.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 543.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 539.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 539.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 538.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 538.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 537.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 535.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 534.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 531.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 525.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 523.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 523.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 522.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 522.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 522.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 520.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 519.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 516.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 515.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 514.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 513.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 512.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 511.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 509.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 508.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 508.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 506.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 506.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 499.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 494.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 494.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 494.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 494.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 491.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 488.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 488.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 486.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 484.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 483.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 482.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 482.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 482.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 482.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 480.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 476.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 474.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 470.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 469.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 467.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 467.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 467.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 465.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 464.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 463.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 462.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 461.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 461.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 461.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 457.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 456.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 455.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 452.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 452.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 450.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 450.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 450.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 449.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 447.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 446.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 445.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 444.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 442.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 440.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 440.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 437.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 437.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 436.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 435.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 434.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 433.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 433.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 432.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 429.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 429.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 429.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 427.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 427.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 424.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 423.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 422.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 421.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 421.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 418.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 416.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 415.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 414.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 413.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 413.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 413.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 413.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 412.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 412.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 407.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 407.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 407.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 407.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 407.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 407.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 407.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 406.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 406.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 406.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 404.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 403.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 402.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 401.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 401.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 399.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 399.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 396.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 395.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 392.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 391.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 390.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 388.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 387.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 386.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 381.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 381.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 380.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 379.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 379.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 377.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 374.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 374.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 372.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 372.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 370.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 369.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 368.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 365.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 362.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 362.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 359.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 358.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 358.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 358.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 357.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 357.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 356.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 353.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 352.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 351.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 351.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 348.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 348.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 348.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 347.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 347.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 347.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 346.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 346.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 344.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 339.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 337.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 335.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 330.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 327.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 327.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 324.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 316.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 312.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 310.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 308.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 305.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 302.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 291.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 291.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 286.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 269.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 263.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 247.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 223.5
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 593.8
Samples: 246

Max nTPM: 1874.1
Min nTPM: 295.0
Std nTPM: 218.7
Median nTPM: 542.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1874.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1822.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1610.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1256.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1195.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1185.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1153.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1093.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1073.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1055.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1044.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 975.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 955.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 951.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 927.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 912.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 899.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 898.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 880.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 873.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 872.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 872.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 845.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 833.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 827.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 819.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 810.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 809.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 805.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 804.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 802.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 801.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 792.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 777.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 775.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 768.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 766.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 753.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 753.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 747.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 745.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 744.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 738.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 733.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 733.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 727.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 723.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 719.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 715.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 715.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 710.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 708.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 707.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 682.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 680.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 680.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 680.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 678.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 674.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 673.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 667.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 661.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 659.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 656.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 652.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 648.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 642.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 641.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 640.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 639.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 638.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 637.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 633.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 633.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 632.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 630.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 627.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 626.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 623.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 622.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 622.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 621.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 618.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 618.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 613.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 612.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 611.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 611.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 610.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 610.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 607.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 605.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 601.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 600.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 600.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 599.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 597.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 596.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 594.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 593.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 590.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 585.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 585.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 582.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 582.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 582.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 581.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 580.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 578.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 569.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 568.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 568.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 567.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 567.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 562.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 558.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 555.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 547.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 546.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 545.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 544.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 544.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 543.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 542.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 541.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 539.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 535.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 532.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 532.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 531.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 531.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 530.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 527.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 527.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 527.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 526.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 525.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 523.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 522.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 522.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 517.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 517.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 515.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 514.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 512.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 511.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 510.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 510.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 509.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 509.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 507.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 505.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 505.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 504.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 503.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 503.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 501.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 500.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 497.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 493.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 491.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 489.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 489.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 489.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 488.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 486.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 482.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 481.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 478.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 477.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 474.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 474.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 473.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 473.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 471.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 469.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 465.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 463.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 456.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 456.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 455.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 453.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 451.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 451.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 449.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 449.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 448.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 444.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 443.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 441.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 440.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 440.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 439.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 431.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 430.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 430.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 428.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 427.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 427.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 424.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 424.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 424.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 423.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 423.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 421.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 421.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 418.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 416.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 412.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 411.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 410.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 408.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 407.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 403.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 402.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 401.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 401.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 401.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 400.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 399.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 399.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 398.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 394.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 393.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 392.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 391.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 377.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 376.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 374.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 372.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 371.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 370.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 367.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 365.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 365.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 363.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 358.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 356.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 356.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 355.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 353.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 352.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 344.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 315.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 303.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 295.0
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 542.9
Samples: 205

Max nTPM: 1245.8
Min nTPM: 323.3
Std nTPM: 153.8
Median nTPM: 509.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1245.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1165.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1072.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1012.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 939.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 930.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 926.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 915.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 832.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 832.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 828.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 827.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 823.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 815.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 802.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 799.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 794.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 786.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 766.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 766.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 764.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 759.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 754.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 737.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 725.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 714.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 700.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 697.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 695.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 693.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 690.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 687.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 666.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 652.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 649.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 646.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 646.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 640.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 628.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 621.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 617.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 617.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 615.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 615.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 611.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 605.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 601.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 598.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 598.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 598.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 597.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 597.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 595.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 593.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 592.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 592.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 591.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 588.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 588.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 586.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 584.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 584.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 581.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 578.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 575.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 575.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 573.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 571.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 567.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 556.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 555.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 555.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 554.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 554.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 553.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 551.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 549.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 549.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 548.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 544.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 540.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 540.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 540.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 537.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 535.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 533.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 532.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 532.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 531.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 528.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 522.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 521.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 519.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 517.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 515.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 515.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 514.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 514.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 511.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 510.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 509.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 509.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 509.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 508.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 507.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 506.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 503.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 502.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 502.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 500.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 500.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 499.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 499.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 497.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 496.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 496.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 495.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 494.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 493.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 493.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 492.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 491.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 489.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 487.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 486.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 486.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 484.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 482.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 482.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 480.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 478.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 478.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 476.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 476.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 475.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 474.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 473.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 473.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 470.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 467.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 465.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 464.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 462.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 461.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 458.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 455.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 455.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 453.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 453.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 449.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 448.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 447.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 444.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 441.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 441.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 436.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 434.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 433.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 433.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 432.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 429.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 426.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 421.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 421.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 421.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 420.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 419.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 419.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 419.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 415.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 412.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 411.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 407.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 406.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 405.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 404.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 404.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 402.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 400.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 400.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 397.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 395.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 395.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 393.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 383.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 382.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 379.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 378.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 377.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 374.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 362.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 358.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 356.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 355.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 352.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 347.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 346.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 338.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 338.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 334.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 333.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 329.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 327.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 323.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 323.3
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

254.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 254.4
FF:10164-103B2 76 years, female 254.4
Nucleus accumbens
Scaled Tags Per Million: 158.2
FF:10037-101F1 23-56 years, mixed 158.2
Putamen
Scaled Tags Per Million: 246.9
FF:10176-103C5 60 years, female 246.9
Globus pallidus
Scaled Tags Per Million: 232.6
FF:10161-103A8 76 years, female 236.8
FF:10175-103C4 60 years, female 228.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

193.9
Pig sample Sample description nTPM
Caudate
nTPM: 155.1
Samples: 4

Max nTPM: 173.2
Min nTPM: 129.5
Sample A Female 149.6
Sample B Female 168.0
Sample C Male 173.2
Sample D Male 129.5
Putamen
nTPM: 193.9
Samples: 4

Max nTPM: 223.4
Min nTPM: 144.5
Sample A Female 223.4
Sample B Female 144.5
Sample C Male 217.2
Sample D Male 190.5
Septum
nTPM: 177.1
Samples: 4

Max nTPM: 221.6
Min nTPM: 155.2
Sample A Female 221.6
Sample B Female 176.2
Sample C Male 155.2
Sample D Male 155.3
Ventral pallidum
nTPM: 171.0
Samples: 4

Max nTPM: 210.7
Min nTPM: 134.4
Sample A Female 134.4
Sample B Female 210.7
Sample C Male 170.5
Sample D Male 168.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

763.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 682.5
Samples: 4

Max nTPM: 771.2
Min nTPM: 610.7
Sample A Male 622.2
Sample B Male 771.2
Sample C Female 610.7
Sample D Female 725.7
Septum
nTPM: 763.5
Samples: 4

Max nTPM: 860.8
Min nTPM: 683.4
Sample A Male 694.8
Sample B Male 860.8
Sample C Female 814.8
Sample D Female 683.4
Ventral forebrain
nTPM: 653.7
Samples: 4

Max nTPM: 868.9
Min nTPM: 550.9
Sample A Male 568.8
Sample B Male 626.2
Sample C Female 868.9
Sample D Female 550.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.1
77464982 Antisense, RP_070129_02_F08, Mouse strain C57BL/6J (56 days, male) 5.1
77868800 Antisense, RP_070129_02_F08, Mouse strain C57BL/6J (56 days, male) 1.8
Pallidum
Expression energy: 5.8
77464982 Antisense, RP_070129_02_F08, Mouse strain C57BL/6J (56 days, male) 5.8
77868800 Antisense, RP_070129_02_F08, Mouse strain C57BL/6J (56 days, male) 2.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org