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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
292.3
nTPM
FANTOM5:
243.7
Scaled Tags Per Million
Pig:
233.2
nTPM
Allen mouse:
5.6
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
292.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 259.8
2090
Male, age 80, both hemispheres
292.8
2188
Female, age 91, both hemispheres
281.5
1984
Male, age 76, both hemispheres
238.1
2301
Female, age 85, both hemispheres
227.0
Dorsal cochlear nucleus nTPM: 292.3
2802
Male, age 74, right hemisphere
337.4
2378
Male, age 80, both hemispheres
305.6
2370
Male, age 61, both hemispheres
294.7
2187
Female, age 91, both hemispheres
280.6
2058
Male, age 76, both hemispheres
243.2
Dorsal tegmental nucleus nTPM: 261.1
2326
Male, age 74, both hemispheres
295.5
2083
Male, age 80, both hemispheres
284.8
2358
Male, age 61, both hemispheres
240.4
1936
Male, age 76, left hemisphere
223.7
Dorsolateral tegmental area nTPM: 267.0
2654
Male, age 80, both hemispheres
309.0
2337
Male, age 61, both hemispheres
303.6
2751
Female, age 85, both hemispheres
261.1
2360
Male, age 74, both hemispheres
253.9
2141
Male, age 76, both hemispheres
207.4
Kolliker-Fuse nucleus nTPM: 260.7
2315
Male, age 76, right hemisphere
283.3
2163
Male, age 80, both hemispheres
255.3
2793
Female, age 91, left hemisphere
243.6
Lateral lemniscal nuclei nTPM: 224.5
2746
Female, age 85, left hemisphere
233.3
2036
Male, age 80, both hemispheres
229.0
2169
Male, age 76, both hemispheres
226.2
2453
Male, age 74, right hemisphere
217.5
2320
Female, age 91, left hemisphere
216.4
Lateral parabrachial nucleus nTPM: 276.8
2790
Male, age 61, both hemispheres
297.5
2013
Male, age 80, both hemispheres
288.7
2792
Male, age 76, both hemispheres
271.4
2139
Female, age 85, right hemisphere
249.6
Lateral vestibular nucleus nTPM: 252.6
2311
Male, age 80, both hemispheres
285.8
2184
Male, age 76, both hemispheres
219.4
Locus coeruleus nTPM: 230.6
2123
Female, age 91, both hemispheres
253.3
2014
Male, age 55, unknown
250.6
2317
Female, age 72, unknown
247.8
2162
Male, age 80, both hemispheres
240.6
1980
Male, age 76, both hemispheres
232.6
2720
Male, age 74, both hemispheres
222.0
2788
Male, age 74, unknown
167.5
Medial parabrachial nucleus nTPM: 258.5
2170
Female, age 91, both hemispheres
307.8
2156
Male, age 61, both hemispheres
276.5
2463
Female, age 85, right hemisphere
264.6
2786
Male, age 76, both hemispheres
225.6
2854
Male, age 80, both hemispheres
217.7
Medial periolivary nuclei nTPM: 237.9
2063
Male, age 76, both hemispheres
292.6
2081
Male, age 80, both hemispheres
250.1
2458
Female, age 91, both hemispheres
221.8
2171
Female, age 85, both hemispheres
218.9
2791
Male, age 74, right hemisphere
206.1
Motor facial nucleus nTPM: 232.0
2062
Male, age 76, both hemispheres
279.1
2795
Female, age 91, both hemispheres
267.3
2126
Male, age 61, both hemispheres
247.5
2365
Male, age 74, right hemisphere
223.3
2697
Female, age 85, both hemispheres
190.2
2327
Male, age 80, both hemispheres
184.4
Motor trigeminal nucleus nTPM: 241.8
2560
Male, age 74, both hemispheres
276.2
2321
Female, age 91, both hemispheres
248.9
2335
Male, age 61, both hemispheres
234.4
2309
Male, age 76, both hemispheres
234.0
2079
Male, age 80, both hemispheres
215.7
Nuclei of the trapezoid body nTPM: 253.5
1983
Male, age 76, both hemispheres
326.1
2368
Female, age 91, both hemispheres
258.8
2166
Male, age 80, both hemispheres
241.7
2735
Female, age 85, both hemispheres
233.2
2159
Male, age 61, both hemispheres
207.8
Nucleus raphe magnus nTPM: 225.7
2051
Male, age 76, both hemispheres
266.2
2459
Female, age 91, both hemispheres
248.3
2455
Male, age 74, both hemispheres
218.9
2172
Female, age 85, both hemispheres
218.1
2160
Male, age 61, both hemispheres
203.5
2328
Male, age 80, both hemispheres
199.1
Paramedian reticular nucleus nTPM: 241.9
2057
Male, age 80, both hemispheres
269.0
2313
Male, age 61, both hemispheres
240.3
2050
Female, age 85, both hemispheres
237.6
2052
Male, age 76, both hemispheres
220.7
Pedunculopontine tegmental nucleus nTPM: 231.4
2334
Male, age 80, both hemispheres
258.5
2338
Male, age 61, both hemispheres
226.1
1921
Female, age 85, both hemispheres
209.5
Pontine nuclei nTPM: 261.9
2787
Female, age 85, both hemispheres
294.7
1863
Male, age 55, unknown
293.5
1968
Male, age 76, left hemisphere
285.2
2319
Female, age 91, both hemispheres
260.1
2109
Female, age 72, unknown
254.4
2115
Male, age 80, left hemisphere
241.7
2454
Male, age 74, left hemisphere
239.0
2727
Male, age 61, right hemisphere
226.2
Pontine raphe nucleus nTPM: 234.5
2122
Female, age 85, midline
240.5
2853
Male, age 76, midline
228.5
Posteroventral cochlear nucleus nTPM: 276.2
2371
Male, age 61, both hemispheres
324.4
2135
Female, age 91, both hemispheres
287.8
2341
Male, age 80, both hemispheres
285.5
2752
Female, age 85, both hemispheres
247.0
2070
Male, age 76, both hemispheres
236.3
Principal sensory trigeminal nucleus nTPM: 218.6
2367
Female, age 91, left hemisphere
231.4
2158
Male, age 61, both hemispheres
222.2
2324
Male, age 76, both hemispheres
215.2
2008
Male, age 80, left hemisphere
205.8
Reticular pontine nucleus, caudal nTPM: 246.1
2559
Male, age 74, both hemispheres
295.3
2092
Male, age 76, both hemispheres
272.5
2457
Female, age 91, both hemispheres
234.4
2332
Male, age 80, right hemisphere
182.1
Reticular pontine nucleus, oral nTPM: 241.7
2366
Female, age 91, both hemispheres
263.7
1939
Male, age 80, both hemispheres
262.5
2167
Male, age 76, both hemispheres
239.4
2012
Female, age 85, both hemispheres
230.8
2361
Male, age 74, both hemispheres
212.3
Reticulotegmental nucleus nTPM: 246.2
2452
Male, age 74, both hemispheres
302.3
2322
Female, age 91, both hemispheres
236.0
2333
Male, age 80, both hemispheres
230.9
2325
Male, age 76, both hemispheres
215.7
Spinal trigeminal nucleus, oral nTPM: 233.2
2164
Male, age 80, both hemispheres
249.2
1978
Male, age 76, both hemispheres
231.3
2737
Female, age 85, both hemispheres
219.1
Subcoeruleus area nTPM: 247.3
2451
Male, age 74, both hemispheres
339.4
2369
Female, age 85, left hemisphere
258.4
1958
Male, age 80, both hemispheres
228.1
2323
Female, age 91, left hemisphere
210.1
2089
Male, age 76, left hemisphere
200.6
Superior olive nTPM: 238.7
2020
Male, age 76, both hemispheres
285.9
2561
Female, age 91, both hemispheres
255.9
1875
Female, age 85, both hemispheres
228.4
2364
Male, age 74, right hemisphere
223.8
2329
Male, age 80, right hemisphere
199.7
Ventral periolivary nuclei nTPM: 238.8
2023
Male, age 76, both hemispheres
287.3
2794
Female, age 91, left hemisphere
243.5
2165
Male, age 80, both hemispheres
232.2
2130
Female, age 85, both hemispheres
192.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 234.7
2456
Female, age 91, both hemispheres
261.1
2161
Male, age 80, both hemispheres
252.6
2359
Male, age 61, both hemispheres
245.1
1959
Male, age 76, both hemispheres
243.9
2449
Male, age 74, both hemispheres
214.2
2840
Female, age 85, both hemispheres
191.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
233.2
Pig sample
Sample description
nTPM
Pons nTPM: 233.2
Samples: 4
Max nTPM: 270.5
Min nTPM: 172.0
Sample A
Female
234.0
Sample B
Female
172.0
Sample C
Male
256.4
Sample D
Male
270.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
