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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:4026.3 nTPM
HPA Brain:3095.6 nTPM
GTEx:4026.3 nTPM
FANTOM5:2178.6 Scaled Tags Per Million
Pig:1325.9 nTPM
Mouse:641.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041602Antibody CAB020769
Glial cells HighHigh
Neuronal cells HighHigh




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3095.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 2425.9
2481 Female, age 94, left hemisphere 3503.8
2846 Female, age 79, unknown 2730.0
2289 Male, age 61, right hemisphere 2685.7
2290 Female, age 72, unknown 2500.5
1857 Female, age 85, left hemisphere 2281.4
1854 Male, age 80, left hemisphere 2103.0
1781 Male, age 74, unknown 1983.1
2288 Male, age 75, left hemisphere 1619.5
Globus pallidus, externus
nTPM: 3095.6
1996 Male, age 80, right hemisphere 3580.5
2646 Male, age 61, right hemisphere 3544.0
2772 Female, age 79, unknown 3193.6
2395 Male, age 75, both hemispheres 2935.6
2567 Female, age 72, unknown 2224.5
Globus pallidus, internus
nTPM: 2983.3
2483 Female, age 94, right hemisphere 3814.2
1818 Male, age 74, unknown 3733.1
2037 Male, age 80, right hemisphere 3177.7
2111 Female, age 85, right hemisphere 2982.8
2778 Female, age 91, both hemispheres 2551.2
2566 Female, age 72, unknown 2531.2
2287 Male, age 75, right hemisphere 2092.9
Nucleus accumbens
nTPM: 1948.8
2698 Female, age 72, unknown 2421.6
1806 Female, age 85, left hemisphere 2169.9
2391 Female, age 94, left hemisphere 2165.4
1783 Male, age 74, unknown 2081.2
2732 Male, age 80, right hemisphere 2053.9
2286 Male, age 75, left hemisphere 1808.4
1856 Female, age 91, right hemisphere 1553.7
2824 Male, age 61, right hemisphere 1336.6
Nucleus basalis of Meynert
nTPM: 2422.0
2569 Male, age 61, both hemispheres 3831.3
2484 Female, age 94, left hemisphere 2217.4
2821 Male, age 75, both hemispheres 1847.2
2393 Male, age 80, right hemisphere 1792.1
Nucleus of the diagonal band
nTPM: 1289.1
1812 Female, age 91, both hemispheres 1686.4
1979 Male, age 74, unknown 1346.5
2775 Male, age 80, right hemisphere 1317.0
2195 Female, age 85, both hemispheres 1288.0
2029 Male, age 61, right hemisphere 807.6
Putamen
nTPM: 2164.6
2482 Female, age 94, left hemisphere 3360.0
2489 Female, age 72, unknown 2447.1
2466 Female, age 79, unknown 2138.3
1829 Male, age 74, unknown 2062.8
1937 Female, age 91, right hemisphere 1828.5
2647 Male, age 75, left hemisphere 1711.8
1838 Male, age 80, right hemisphere 1603.8
Septal nuclei
nTPM: 1534.1
2199 Male, age 80, right hemisphere 1771.0
2059 Female, age 85, both hemispheres 1637.4
1960 Male, age 74, unknown 1603.0
2394 Male, age 61, left hemisphere 1546.0
2629 Female, age 94, right hemisphere 1420.7
2009 Female, age 91, both hemispheres 1414.1
2031 Female, age 72, unknown 1346.7
Stria terminalis, bed nucleus
nTPM: 1292.7
1974 Female, age 91, both hemispheres 1386.7
2486 Female, age 94, both hemispheres 1259.6
2201 Male, age 74, unknown 1231.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4026.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 3634.0
Samples: 246

Max nTPM: 15620.8
Min nTPM: 923.9
Std nTPM: 1732.0
Median nTPM: 3275.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 15620.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 11078.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 10217.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 9150.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 9078.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 7883.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 7823.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 6980.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 6965.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 6909.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 6805.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 6665.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 6624.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 6617.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 6572.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 6356.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 6259.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 6249.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 6196.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 6130.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 5997.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 5736.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 5726.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 5724.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 5696.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 5691.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 5574.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 5488.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 5482.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 5356.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 5226.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 5158.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 5128.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 5102.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 5099.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 5056.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 5027.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 5014.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 5011.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 5003.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 4901.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 4888.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 4883.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 4824.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 4813.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 4779.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 4738.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 4711.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 4634.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 4603.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 4593.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 4544.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 4534.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 4510.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 4508.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 4500.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 4469.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 4430.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 4403.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 4338.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 4330.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 4317.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 4295.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 4269.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 4214.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 4211.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 4197.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 4138.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 4131.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 4121.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 4065.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 4044.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 4038.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 4019.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 4006.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 3980.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 3967.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 3956.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 3940.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 3918.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 3915.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 3866.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 3827.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 3800.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 3792.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 3767.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 3746.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 3744.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 3722.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 3719.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 3681.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 3653.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 3650.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 3634.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 3628.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 3626.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 3615.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 3599.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 3586.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 3577.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 3565.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 3548.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 3541.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 3522.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 3519.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 3518.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 3471.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 3463.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 3450.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 3445.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 3415.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 3383.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 3380.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 3342.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 3325.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 3322.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 3322.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 3320.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 3296.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 3291.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 3285.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 3279.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 3279.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 3272.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 3263.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 3228.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 3217.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 3209.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 3208.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 3199.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 3190.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 3169.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 3137.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 3130.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 3068.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 3063.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 3061.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 3053.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 3039.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 3037.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 3036.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 3027.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 3014.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 2996.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 2993.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 2951.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 2951.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 2929.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 2908.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 2901.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 2897.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 2884.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 2880.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 2878.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 2872.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 2853.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 2852.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 2846.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 2840.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 2822.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 2805.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 2781.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 2775.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 2772.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 2768.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 2750.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 2748.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 2721.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 2718.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 2694.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 2653.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 2652.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 2652.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 2610.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 2604.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 2593.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 2585.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 2583.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 2583.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 2557.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 2542.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 2533.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 2523.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 2504.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 2498.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 2485.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 2482.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 2448.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 2443.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 2430.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 2426.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 2424.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 2412.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 2411.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 2384.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 2383.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 2379.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 2346.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 2342.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 2300.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 2291.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 2287.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 2274.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 2257.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 2249.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 2232.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 2231.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 2225.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 2221.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 2194.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 2178.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 2175.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 2152.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 2148.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 2144.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 2120.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 2119.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 2098.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 2055.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 2044.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 2013.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1988.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1973.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1973.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1946.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1936.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1934.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1920.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1914.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1897.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1869.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1846.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1830.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1800.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1798.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1747.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1730.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1707.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1696.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 1652.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1634.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1622.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1367.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1319.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1290.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 923.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 3712.1
Samples: 246

Max nTPM: 15802.3
Min nTPM: 1174.6
Std nTPM: 2069.6
Median nTPM: 3071.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 15802.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 13490.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 12386.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 11067.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 9989.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 9620.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 8968.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 8517.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 8363.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 8039.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 7924.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 7742.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 7672.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 7617.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 7311.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 7284.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 7278.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 7092.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 7060.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 6873.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 6470.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 6344.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 6311.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 6281.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 6012.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 5831.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 5818.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 5731.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 5689.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 5684.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 5646.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 5552.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 5544.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 5532.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 5297.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 5266.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 5196.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 5154.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 5151.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 5146.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 5106.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 5091.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 5057.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 5024.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 4958.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 4894.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 4889.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 4857.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 4850.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 4804.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 4764.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 4713.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 4703.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 4680.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 4653.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 4593.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 4592.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 4554.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 4545.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 4528.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 4507.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 4506.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 4489.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 4476.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 4473.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 4428.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 4377.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 4358.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 4337.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 4325.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 4318.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 4304.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 4263.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 4255.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 4246.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 4238.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 4230.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 4214.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 4198.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 4141.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 4134.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 4118.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 4050.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 3976.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 3906.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 3879.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 3857.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 3853.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 3838.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 3833.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 3817.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 3800.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 3739.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 3637.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 3607.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 3537.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 3515.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 3511.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 3490.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 3451.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 3451.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 3443.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 3429.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 3428.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 3377.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 3342.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 3338.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 3308.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 3295.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 3240.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 3233.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 3221.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 3201.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 3189.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 3185.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 3184.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 3167.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 3156.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 3086.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 3081.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 3080.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 3075.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 3074.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 3067.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 3052.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 3045.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 3020.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 3010.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 3008.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 3007.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 3007.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 3000.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 2983.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 2957.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 2952.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 2942.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 2939.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 2937.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 2937.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 2892.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 2892.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 2889.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 2887.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 2874.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 2860.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 2838.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 2826.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 2812.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 2801.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 2797.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 2775.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 2769.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 2718.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 2708.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 2703.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 2668.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 2665.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 2649.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 2618.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 2618.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 2608.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 2594.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 2590.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 2574.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 2565.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 2557.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 2549.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 2541.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 2541.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 2518.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 2517.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 2502.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 2497.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 2491.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 2486.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 2481.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 2475.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 2452.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 2425.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 2391.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 2386.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 2360.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 2357.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 2348.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 2340.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 2338.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 2335.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 2325.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 2319.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 2313.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 2310.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 2309.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 2304.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 2273.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 2271.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 2248.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 2226.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 2226.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 2217.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 2217.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 2202.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 2193.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 2154.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 2143.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 2138.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 2128.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 2124.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 2123.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 2095.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 2094.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 2077.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 2077.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 2062.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 2055.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 2017.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 1985.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1978.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 1962.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 1935.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 1925.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 1900.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 1893.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 1871.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1866.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 1855.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 1830.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 1787.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 1780.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 1775.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1770.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 1769.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 1713.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 1690.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 1667.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 1665.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1649.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 1540.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 1481.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 1474.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1469.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 1467.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 1441.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 1439.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1438.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 1274.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 1174.6
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Brain - Putamen (basal ganglia)
Average nTPM: 4026.3
Samples: 205

Max nTPM: 9721.2
Min nTPM: 1525.1
Std nTPM: 1722.5
Median nTPM: 3536.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 9721.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 9581.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 9244.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 9211.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 9105.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 8960.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 8574.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 8520.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 8303.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 8240.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 7981.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 7831.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 7467.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 7148.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 6964.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 6961.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 6647.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 6604.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 6600.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 6588.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 6587.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 6551.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 6468.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 6465.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 6313.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 6280.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 6226.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 6212.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 6167.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 5767.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 5738.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 5616.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 5612.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 5586.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 5496.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 5292.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 5223.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 5127.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 5122.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 5049.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 4983.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 4972.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 4963.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 4934.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 4902.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 4875.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 4873.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 4865.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 4860.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 4854.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 4820.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 4749.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 4637.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 4628.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 4618.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 4582.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 4530.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 4518.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 4470.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 4462.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 4435.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 4378.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 4353.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 4321.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 4285.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 4273.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 4271.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 4221.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 4218.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 4212.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 4200.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 4195.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 4171.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 4108.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 4101.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 4087.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 4072.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 4044.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 4042.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 4023.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 4021.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 3977.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 3952.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 3942.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 3930.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 3901.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 3886.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 3839.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 3820.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 3790.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 3781.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 3777.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 3743.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 3730.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 3695.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 3682.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 3676.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 3646.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 3630.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 3627.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 3622.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 3544.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 3536.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 3534.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 3507.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 3485.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 3460.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 3442.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 3442.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 3441.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 3429.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 3387.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 3343.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 3332.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 3298.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 3274.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 3272.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 3249.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 3247.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 3232.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 3227.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 3214.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 3199.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 3194.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 3144.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 3129.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 3121.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 3116.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 3105.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 3090.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 3064.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 3053.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 3040.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 3038.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 3030.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 3025.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 3018.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 3018.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 3016.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 2997.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 2985.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 2981.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 2979.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 2958.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 2921.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 2917.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 2914.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 2905.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 2904.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 2901.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 2889.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 2886.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 2877.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 2852.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 2844.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 2834.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 2823.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 2811.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 2775.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 2754.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 2743.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 2729.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 2728.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 2721.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 2715.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 2698.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 2656.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 2640.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 2620.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 2608.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 2584.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 2573.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 2560.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 2521.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 2512.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 2504.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2495.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 2478.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 2447.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 2429.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 2418.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 2397.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 2369.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 2330.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 2329.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 2323.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 2315.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 2311.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 2306.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 2305.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 2290.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 2238.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 2210.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 2200.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 2191.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 2184.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 2086.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 2055.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 2002.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1908.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1873.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1838.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 1791.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1637.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1525.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2178.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1822.9
FF:10164-103B2 76 years, female 1822.9
Nucleus accumbens
Scaled Tags Per Million: 1704.1
FF:10037-101F1 23-56 years, mixed 1704.1
Putamen
Scaled Tags Per Million: 1599.5
FF:10176-103C5 60 years, female 1599.5
Globus pallidus
Scaled Tags Per Million: 2178.6
FF:10175-103C4 60 years, female 2304.8
FF:10161-103A8 76 years, female 2052.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1325.9
Pig sample Sample description nTPM
Caudate
nTPM: 805.5
Samples: 4

Max nTPM: 920.8
Min nTPM: 676.6
Sample A Female 733.8
Sample B Female 890.8
Sample C Male 920.8
Sample D Male 676.6
Putamen
nTPM: 1325.9
Samples: 4

Max nTPM: 1819.9
Min nTPM: 848.0
Sample A Female 1819.9
Sample B Female 848.0
Sample C Male 1390.1
Sample D Male 1245.5
Septum
nTPM: 874.9
Samples: 4

Max nTPM: 1094.0
Min nTPM: 795.1
Sample A Female 1094.0
Sample B Female 797.9
Sample C Male 812.5
Sample D Male 795.1
Ventral pallidum
nTPM: 982.1
Samples: 4

Max nTPM: 1150.4
Min nTPM: 686.3
Sample A Female 686.3
Sample B Female 1150.4
Sample C Male 1046.9
Sample D Male 1044.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

641.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 641.5
Samples: 4

Max nTPM: 700.1
Min nTPM: 599.0
Sample A Male 624.1
Sample B Male 700.1
Sample C Female 599.0
Sample D Female 642.8
Septum
nTPM: 485.6
Samples: 4

Max nTPM: 507.8
Min nTPM: 455.7
Sample A Male 455.7
Sample B Male 493.5
Sample C Female 507.8
Sample D Female 485.2
Ventral forebrain
nTPM: 611.5
Samples: 4

Max nTPM: 742.2
Min nTPM: 536.3
Sample A Male 611.3
Sample B Male 536.3
Sample C Female 742.2
Sample D Female 556.2

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