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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:1151.0 nTPM
FANTOM5:404.4 Scaled Tags Per Million
Pig:1448.6 nTPM

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1151.0
Sample id Sample description nTPM
Area postrema
nTPM: 790.0
2799 Male, age 61, both hemispheres 908.9
2306 Male, age 80, both hemispheres 753.9
2054 Male, age 76, both hemispheres 707.2
Dorsal medullary reticular nucleus
nTPM: 893.2
2088 Male, age 76, both hemispheres 931.4
2040 Female, age 85, both hemispheres 889.0
2373 Male, age 61, both hemispheres 859.3
Dorsal motor vagal complex
nTPM: 865.2
2797 Male, age 61, both hemispheres 1152.2
2000 Male, age 74, unknown 1126.5
2844 Male, age 55, unknown 1058.7
2185 Male, age 76, both hemispheres 911.7
2133 Female, age 91, both hemispheres 898.9
2643 Male, age 74, both hemispheres 781.7
2813 Female, age 72, unknown 602.2
2807 Female, age 85, both hemispheres 390.0
Gigantocellular reticular nuclei, medullary
nTPM: 950.8
2022 Male, age 76, right hemisphere 1242.7
1876 Female, age 85, both hemispheres 1050.7
2314 Male, age 61, both hemispheres 1017.2
2387 Female, age 91, both hemispheres 932.7
2462 Male, age 74, both hemispheres 735.5
2310 Male, age 80, both hemispheres 726.2
Gigantocellular reticular nuclei, pars
nTPM: 867.3
2084 Female, age 85, both hemispheres 1181.9
2168 Male, age 76, both hemispheres 905.5
2336 Male, age 61, both hemispheres 861.4
2706 Male, age 80, both hemispheres 705.1
2330 Male, age 80, both hemispheres 682.8
Inferior olive
nTPM: 1151.0
2563 Male, age 74, both hemispheres 1624.1
2085 Female, age 85, both hemispheres 1376.6
2379 Male, age 80, both hemispheres 972.7
2178 Male, age 61, both hemispheres 955.0
2628 Female, age 91, both hemispheres 826.6
Lateral medullary reticular nucleus
nTPM: 930.4
2804 Female, age 91, both hemispheres 1052.5
2044 Male, age 76, both hemispheres 1031.1
2852 Male, age 80, both hemispheres 960.8
2305 Male, age 74, both hemispheres 911.5
2190 Female, age 85, both hemispheres 854.5
2374 Male, age 61, both hemispheres 771.7
Medial olivary nucleus
nTPM: 993.5
2138 Female, age 91, both hemispheres 1353.7
1962 Male, age 76, both hemispheres 1137.3
1943 Male, age 61, both hemispheres 756.6
2851 Male, age 80, both hemispheres 726.4
Medial vestibular nucleus
nTPM: 1047.2
2093 Male, age 80, both hemispheres 1213.3
2803 Female, age 91, both hemispheres 1125.8
2743 Female, age 85, both hemispheres 1022.2
2134 Male, age 76, both hemispheres 990.2
2624 Male, age 61, both hemispheres 968.7
2801 Male, age 74, both hemispheres 963.2
Motor hypoglossal nucleus
nTPM: 695.0
2125 Female, age 91, both hemispheres 1095.0
2132 Female, age 85, both hemispheres 726.2
2277 Male, age 76, both hemispheres 667.9
2182 Male, age 80, both hemispheres 529.6
2461 Male, age 61, both hemispheres 456.3
Nucleus ambiguus
nTPM: 1133.6
2071 Male, age 76, both hemispheres 1370.5
2096 Female, age 85, both hemispheres 896.8
Nucleus cuneatus
nTPM: 887.0
2564 Male, age 74, both hemispheres 1205.1
2562 Male, age 61, both hemispheres 1020.9
2100 Male, age 76, both hemispheres 935.0
2131 Male, age 76, both hemispheres 930.0
2376 Male, age 61, both hemispheres 872.7
2805 Female, age 91, both hemispheres 800.9
2381 Male, age 80, both hemispheres 748.6
2380 Male, age 80, both hemispheres 747.2
2808 Female, age 85, both hemispheres 722.7
Nucleus gracilis
nTPM: 696.2
2627 Male, age 74, both hemispheres 837.6
2299 Female, age 85, both hemispheres 628.0
2382 Male, age 80, both hemispheres 623.0
Nucleus raphe obscurus
nTPM: 997.4
2142 Male, age 76, midline 1117.8
2845 Female, age 85, midline 974.4
2800 Male, age 61, midline 900.1
Nucleus raphe pallidus
nTPM: 760.3
2145 Male, age 76, midline 899.3
2183 Male, age 80, midline 805.4
1924 Male, age 61, midline 576.1
Nucleus tractus solitarii
nTPM: 634.4
2656 Male, age 76, both hemispheres 890.5
2144 Female, age 91, right hemisphere 747.9
2191 Female, age 85, both hemispheres 524.6
2307 Male, age 80, both hemispheres 374.5
Parvicellular reticular nuclei
nTPM: 1020.2
2095 Male, age 76, both hemispheres 1214.5
2119 Male, age 80, both hemispheres 1205.9
2558 Male, age 74, both hemispheres 640.1
Parvicellular reticular nuclei, medullary
nTPM: 952.6
2091 Female, age 85, both hemispheres 1024.6
2181 Male, age 80, left hemisphere 920.1
2189 Female, age 91, both hemispheres 913.1
Peritrigeminal nucleus
nTPM: 1093.8
2136 Male, age 76, both hemispheres 1245.9
2067 Female, age 85, both hemispheres 1211.7
2179 Male, age 61, both hemispheres 823.8
Prepositus hypoglossal nucleus
nTPM: 938.4
2855 Female, age 85, right hemisphere 1011.5
2086 Male, age 80, both hemispheres 865.3
Spinal trigeminal nucleus, caudal
nTPM: 872.2
2447 Male, age 76, both hemispheres 1048.3
2312 Male, age 61, both hemispheres 868.1
2390 Female, age 91, both hemispheres 849.9
2642 Male, age 74, both hemispheres 797.7
2308 Male, age 80, both hemispheres 797.0
Spinal trigeminal nucleus, interpolar
nTPM: 990.9
2066 Male, age 76, right hemisphere 1235.7
2625 Male, age 61, both hemispheres 1229.5
2033 Male, age 80, both hemispheres 888.3
2389 Female, age 91, both hemispheres 883.1
2386 Female, age 85, both hemispheres 718.1
Spinal vestibular nucleus
nTPM: 1042.2
2748 Male, age 76, both hemispheres 1216.6
2384 Male, age 74, both hemispheres 1036.1
2186 Female, age 91, both hemispheres 1034.9
2806 Female, age 85, both hemispheres 1007.1
2796 Male, age 61, both hemispheres 983.1
2780 Male, age 80, both hemispheres 975.5
Superior vestibular nucleus
nTPM: 1147.1
2061 Male, age 76, both hemispheres 1189.1
2383 Male, age 74, both hemispheres 1163.1
2015 Male, age 80, both hemispheres 1089.2
Ventral medullary reticular nucleus
nTPM: 975.6
2060 Male, age 76, both hemispheres 994.3
2372 Male, age 61, both hemispheres 957.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 963.6
1986 Male, age 76, both hemispheres 1166.8
2302 Female, age 91, both hemispheres 1063.9
2180 Male, age 61, both hemispheres 865.9
2118 Male, age 80, both hemispheres 861.0
2741 Female, age 85, both hemispheres 860.6

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

404.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 404.4
FF:10174-103C3 60 years, female 430.3
FF:10038-101F2 18-64 years, mixed 393.8
FF:10155-103A2 76 years, female 389.0

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1448.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 1448.6
Samples: 4

Max nTPM: 1688.4
Min nTPM: 1115.9
Sample A Female 1115.9
Sample B Female 1491.0
Sample C Male 1688.4
Sample D Male 1499.0

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