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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1162.2
nTPM
FANTOM5:
620.6
Scaled Tags Per Million
Pig:
1563.6
nTPM
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1162.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 994.0
1984
Male, age 76, both hemispheres
1029.7
2188
Female, age 91, both hemispheres
998.7
2301
Female, age 85, both hemispheres
977.2
2090
Male, age 80, both hemispheres
970.3
Dorsal cochlear nucleus nTPM: 1013.7
2370
Male, age 61, both hemispheres
1149.4
2058
Male, age 76, both hemispheres
1090.4
2802
Male, age 74, right hemisphere
1057.3
2187
Female, age 91, both hemispheres
959.3
2378
Male, age 80, both hemispheres
812.4
Dorsal tegmental nucleus nTPM: 1024.8
2083
Male, age 80, both hemispheres
1434.0
1936
Male, age 76, left hemisphere
1186.5
2326
Male, age 74, both hemispheres
957.8
2358
Male, age 61, both hemispheres
521.1
Dorsolateral tegmental area nTPM: 1065.1
2751
Female, age 85, both hemispheres
1354.2
2654
Male, age 80, both hemispheres
1267.6
2141
Male, age 76, both hemispheres
991.5
2360
Male, age 74, both hemispheres
922.8
2337
Male, age 61, both hemispheres
789.5
Kolliker-Fuse nucleus nTPM: 1116.4
2315
Male, age 76, right hemisphere
1281.7
2163
Male, age 80, both hemispheres
1162.2
2793
Female, age 91, left hemisphere
905.2
Lateral lemniscal nuclei nTPM: 842.6
2169
Male, age 76, both hemispheres
1016.4
2746
Female, age 85, left hemisphere
894.1
2320
Female, age 91, left hemisphere
805.4
2036
Male, age 80, both hemispheres
789.7
2453
Male, age 74, right hemisphere
707.5
Lateral parabrachial nucleus nTPM: 1051.2
2139
Female, age 85, right hemisphere
1228.0
2792
Male, age 76, both hemispheres
1190.5
2013
Male, age 80, both hemispheres
1026.6
2790
Male, age 61, both hemispheres
759.9
Lateral vestibular nucleus nTPM: 1162.2
2184
Male, age 76, both hemispheres
1266.7
2311
Male, age 80, both hemispheres
1057.6
Locus coeruleus nTPM: 996.5
2317
Female, age 72, unknown
1216.4
2014
Male, age 55, unknown
1103.6
2123
Female, age 91, both hemispheres
1020.7
2162
Male, age 80, both hemispheres
993.0
1980
Male, age 76, both hemispheres
986.2
2788
Male, age 74, unknown
891.3
2720
Male, age 74, both hemispheres
764.0
Medial parabrachial nucleus nTPM: 1095.7
2463
Female, age 85, right hemisphere
1289.6
2170
Female, age 91, both hemispheres
1233.0
2156
Male, age 61, both hemispheres
1079.6
2786
Male, age 76, both hemispheres
1039.4
2854
Male, age 80, both hemispheres
837.1
Medial periolivary nuclei nTPM: 859.3
2063
Male, age 76, both hemispheres
1075.9
2791
Male, age 74, right hemisphere
909.1
2171
Female, age 85, both hemispheres
812.0
2081
Male, age 80, both hemispheres
771.7
2458
Female, age 91, both hemispheres
727.9
Motor facial nucleus nTPM: 872.9
2062
Male, age 76, both hemispheres
1266.8
2126
Male, age 61, both hemispheres
955.1
2795
Female, age 91, both hemispheres
926.2
2365
Male, age 74, right hemisphere
795.2
2327
Male, age 80, both hemispheres
670.1
2697
Female, age 85, both hemispheres
624.0
Motor trigeminal nucleus nTPM: 907.4
2309
Male, age 76, both hemispheres
1113.6
2079
Male, age 80, both hemispheres
984.9
2335
Male, age 61, both hemispheres
899.6
2321
Female, age 91, both hemispheres
779.7
2560
Male, age 74, both hemispheres
759.4
Nuclei of the trapezoid body nTPM: 982.9
1983
Male, age 76, both hemispheres
1321.3
2159
Male, age 61, both hemispheres
949.0
2735
Female, age 85, both hemispheres
892.6
2368
Female, age 91, both hemispheres
884.9
2166
Male, age 80, both hemispheres
866.5
Nucleus raphe magnus nTPM: 836.0
2160
Male, age 61, both hemispheres
973.8
2455
Male, age 74, both hemispheres
934.4
2051
Male, age 76, both hemispheres
907.4
2328
Male, age 80, both hemispheres
817.1
2459
Female, age 91, both hemispheres
779.5
2172
Female, age 85, both hemispheres
604.0
Paramedian reticular nucleus nTPM: 933.8
2057
Male, age 80, both hemispheres
1070.8
2313
Male, age 61, both hemispheres
1038.7
2050
Female, age 85, both hemispheres
855.4
2052
Male, age 76, both hemispheres
770.4
Pedunculopontine tegmental nucleus nTPM: 1076.6
2334
Male, age 80, both hemispheres
1146.0
1921
Female, age 85, both hemispheres
1127.9
2338
Male, age 61, both hemispheres
955.7
Pontine nuclei nTPM: 957.8
1863
Male, age 55, unknown
1190.0
1968
Male, age 76, left hemisphere
1104.8
2787
Female, age 85, both hemispheres
1001.5
2319
Female, age 91, both hemispheres
940.6
2115
Male, age 80, left hemisphere
902.1
2454
Male, age 74, left hemisphere
862.2
2727
Male, age 61, right hemisphere
858.1
2109
Female, age 72, unknown
802.9
Pontine raphe nucleus nTPM: 1082.8
2853
Male, age 76, midline
1135.2
2122
Female, age 85, midline
1030.3
Posteroventral cochlear nucleus nTPM: 1114.6
2371
Male, age 61, both hemispheres
1366.9
2752
Female, age 85, both hemispheres
1090.3
2135
Female, age 91, both hemispheres
1079.1
2070
Male, age 76, both hemispheres
1024.8
2341
Male, age 80, both hemispheres
1011.8
Principal sensory trigeminal nucleus nTPM: 946.3
2324
Male, age 76, both hemispheres
1130.1
2158
Male, age 61, both hemispheres
915.1
2008
Male, age 80, left hemisphere
885.5
2367
Female, age 91, left hemisphere
854.5
Reticular pontine nucleus, caudal nTPM: 964.1
2092
Male, age 76, both hemispheres
1221.1
2457
Female, age 91, both hemispheres
932.5
2559
Male, age 74, both hemispheres
902.0
2332
Male, age 80, right hemisphere
800.8
Reticular pontine nucleus, oral nTPM: 1057.4
1939
Male, age 80, both hemispheres
1377.6
2167
Male, age 76, both hemispheres
1172.5
2012
Female, age 85, both hemispheres
1011.2
2366
Female, age 91, both hemispheres
925.2
2361
Male, age 74, both hemispheres
800.5
Reticulotegmental nucleus nTPM: 1058.8
2333
Male, age 80, both hemispheres
1144.8
2325
Male, age 76, both hemispheres
1132.7
2322
Female, age 91, both hemispheres
1013.5
2452
Male, age 74, both hemispheres
944.1
Spinal trigeminal nucleus, oral nTPM: 1004.3
1978
Male, age 76, both hemispheres
1065.4
2737
Female, age 85, both hemispheres
1046.3
2164
Male, age 80, both hemispheres
901.1
Subcoeruleus area nTPM: 1067.0
2369
Female, age 85, left hemisphere
1243.1
2451
Male, age 74, both hemispheres
1137.4
1958
Male, age 80, both hemispheres
1072.7
2089
Male, age 76, left hemisphere
996.9
2323
Female, age 91, left hemisphere
885.1
Superior olive nTPM: 880.9
2020
Male, age 76, both hemispheres
1129.9
2364
Male, age 74, right hemisphere
934.2
1875
Female, age 85, both hemispheres
822.4
2329
Male, age 80, right hemisphere
774.0
2561
Female, age 91, both hemispheres
744.3
Ventral periolivary nuclei nTPM: 854.9
2023
Male, age 76, both hemispheres
1043.2
2165
Male, age 80, both hemispheres
987.2
2794
Female, age 91, left hemisphere
705.2
2130
Female, age 85, both hemispheres
684.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 894.8
2359
Male, age 61, both hemispheres
1192.3
1959
Male, age 76, both hemispheres
961.7
2456
Female, age 91, both hemispheres
874.3
2161
Male, age 80, both hemispheres
845.7
2449
Male, age 74, both hemispheres
768.6
2840
Female, age 85, both hemispheres
726.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
