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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
311.7
nTPM
FANTOM5:
28.4
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
311.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 263.1
2090
Male, age 80, both hemispheres
315.2
2188
Female, age 91, both hemispheres
256.8
2301
Female, age 85, both hemispheres
252.7
1984
Male, age 76, both hemispheres
227.7
Dorsal cochlear nucleus nTPM: 308.3
2378
Male, age 80, both hemispheres
347.3
2370
Male, age 61, both hemispheres
309.1
2802
Male, age 74, right hemisphere
304.1
2187
Female, age 91, both hemispheres
295.9
2058
Male, age 76, both hemispheres
285.2
Dorsal tegmental nucleus nTPM: 311.7
2358
Male, age 61, both hemispheres
473.2
2083
Male, age 80, both hemispheres
278.7
2326
Male, age 74, both hemispheres
257.8
1936
Male, age 76, left hemisphere
237.0
Dorsolateral tegmental area nTPM: 298.8
2337
Male, age 61, both hemispheres
502.2
2654
Male, age 80, both hemispheres
292.1
2360
Male, age 74, both hemispheres
239.1
2751
Female, age 85, both hemispheres
238.7
2141
Male, age 76, both hemispheres
221.7
Kolliker-Fuse nucleus nTPM: 271.7
2315
Male, age 76, right hemisphere
342.3
2163
Male, age 80, both hemispheres
243.5
2793
Female, age 91, left hemisphere
229.1
Lateral lemniscal nuclei nTPM: 213.1
2746
Female, age 85, left hemisphere
247.1
2036
Male, age 80, both hemispheres
209.6
2453
Male, age 74, right hemisphere
209.2
2320
Female, age 91, left hemisphere
201.1
2169
Male, age 76, both hemispheres
198.7
Lateral parabrachial nucleus nTPM: 310.5
2790
Male, age 61, both hemispheres
355.3
2792
Male, age 76, both hemispheres
335.3
2013
Male, age 80, both hemispheres
291.8
2139
Female, age 85, right hemisphere
259.8
Lateral vestibular nucleus nTPM: 255.9
2311
Male, age 80, both hemispheres
308.8
2184
Male, age 76, both hemispheres
203.1
Locus coeruleus nTPM: 254.2
2123
Female, age 91, both hemispheres
267.4
2162
Male, age 80, both hemispheres
263.0
2317
Female, age 72, unknown
258.8
2720
Male, age 74, both hemispheres
253.2
2788
Male, age 74, unknown
248.5
2014
Male, age 55, unknown
248.4
1980
Male, age 76, both hemispheres
240.1
Medial parabrachial nucleus nTPM: 252.5
2170
Female, age 91, both hemispheres
287.8
2156
Male, age 61, both hemispheres
256.1
2854
Male, age 80, both hemispheres
244.1
2463
Female, age 85, right hemisphere
242.6
2786
Male, age 76, both hemispheres
231.8
Medial periolivary nuclei nTPM: 242.2
2081
Male, age 80, both hemispheres
280.9
2063
Male, age 76, both hemispheres
279.0
2791
Male, age 74, right hemisphere
223.7
2458
Female, age 91, both hemispheres
219.9
2171
Female, age 85, both hemispheres
207.3
Motor facial nucleus nTPM: 232.0
2795
Female, age 91, both hemispheres
264.5
2126
Male, age 61, both hemispheres
260.2
2062
Male, age 76, both hemispheres
246.1
2365
Male, age 74, right hemisphere
236.1
2697
Female, age 85, both hemispheres
212.0
2327
Male, age 80, both hemispheres
173.1
Motor trigeminal nucleus nTPM: 237.3
2335
Male, age 61, both hemispheres
270.3
2560
Male, age 74, both hemispheres
257.9
2321
Female, age 91, both hemispheres
228.1
2309
Male, age 76, both hemispheres
220.5
2079
Male, age 80, both hemispheres
209.8
Nuclei of the trapezoid body nTPM: 229.4
1983
Male, age 76, both hemispheres
285.0
2368
Female, age 91, both hemispheres
237.4
2166
Male, age 80, both hemispheres
222.5
2735
Female, age 85, both hemispheres
214.5
2159
Male, age 61, both hemispheres
187.5
Nucleus raphe magnus nTPM: 218.7
2051
Male, age 76, both hemispheres
276.4
2459
Female, age 91, both hemispheres
235.1
2172
Female, age 85, both hemispheres
206.8
2160
Male, age 61, both hemispheres
205.6
2328
Male, age 80, both hemispheres
199.7
2455
Male, age 74, both hemispheres
188.6
Paramedian reticular nucleus nTPM: 248.7
2052
Male, age 76, both hemispheres
278.1
2057
Male, age 80, both hemispheres
268.0
2313
Male, age 61, both hemispheres
235.8
2050
Female, age 85, both hemispheres
212.8
Pedunculopontine tegmental nucleus nTPM: 295.9
2338
Male, age 61, both hemispheres
426.7
2334
Male, age 80, both hemispheres
265.4
1921
Female, age 85, both hemispheres
195.6
Pontine nuclei nTPM: 233.1
2115
Male, age 80, left hemisphere
262.9
2787
Female, age 85, both hemispheres
257.2
2727
Male, age 61, right hemisphere
240.0
1968
Male, age 76, left hemisphere
237.2
2319
Female, age 91, both hemispheres
233.3
1863
Male, age 55, unknown
227.9
2109
Female, age 72, unknown
222.3
2454
Male, age 74, left hemisphere
183.7
Pontine raphe nucleus nTPM: 235.8
2853
Male, age 76, midline
241.8
2122
Female, age 85, midline
229.9
Posteroventral cochlear nucleus nTPM: 289.5
2341
Male, age 80, both hemispheres
351.1
2371
Male, age 61, both hemispheres
339.6
2135
Female, age 91, both hemispheres
280.4
2070
Male, age 76, both hemispheres
240.6
2752
Female, age 85, both hemispheres
236.1
Principal sensory trigeminal nucleus nTPM: 209.4
2158
Male, age 61, both hemispheres
221.5
2324
Male, age 76, both hemispheres
208.3
2367
Female, age 91, left hemisphere
207.7
2008
Male, age 80, left hemisphere
200.2
Reticular pontine nucleus, caudal nTPM: 222.9
2092
Male, age 76, both hemispheres
262.2
2457
Female, age 91, both hemispheres
232.5
2559
Male, age 74, both hemispheres
225.9
2332
Male, age 80, right hemisphere
171.1
Reticular pontine nucleus, oral nTPM: 235.3
2361
Male, age 74, both hemispheres
278.7
1939
Male, age 80, both hemispheres
256.3
2167
Male, age 76, both hemispheres
233.1
2012
Female, age 85, both hemispheres
206.4
2366
Female, age 91, both hemispheres
202.1
Reticulotegmental nucleus nTPM: 230.7
2452
Male, age 74, both hemispheres
255.5
2322
Female, age 91, both hemispheres
234.7
2333
Male, age 80, both hemispheres
227.6
2325
Male, age 76, both hemispheres
204.9
Spinal trigeminal nucleus, oral nTPM: 229.4
2164
Male, age 80, both hemispheres
249.3
1978
Male, age 76, both hemispheres
232.2
2737
Female, age 85, both hemispheres
206.8
Subcoeruleus area nTPM: 246.5
2451
Male, age 74, both hemispheres
323.0
2369
Female, age 85, left hemisphere
256.2
1958
Male, age 80, both hemispheres
229.4
2323
Female, age 91, left hemisphere
217.3
2089
Male, age 76, left hemisphere
206.5
Superior olive nTPM: 222.3
2020
Male, age 76, both hemispheres
273.0
2561
Female, age 91, both hemispheres
245.7
2364
Male, age 74, right hemisphere
216.2
2329
Male, age 80, right hemisphere
189.3
1875
Female, age 85, both hemispheres
187.3
Ventral periolivary nuclei nTPM: 228.8
2023
Male, age 76, both hemispheres
279.5
2794
Female, age 91, left hemisphere
227.1
2165
Male, age 80, both hemispheres
208.1
2130
Female, age 85, both hemispheres
200.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 250.7
2359
Male, age 61, both hemispheres
342.1
2161
Male, age 80, both hemispheres
262.1
2456
Female, age 91, both hemispheres
248.3
1959
Male, age 76, both hemispheres
233.4
2840
Female, age 85, both hemispheres
215.1
2449
Male, age 74, both hemispheres
203.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
