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RPLP0
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BRAIN WHITE MATTER Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
WHITE MATTER - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:362.8 nTPM
FANTOM5:31.2 Scaled Tags Per Million

WHITE MATTER - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

362.8
Sample id Sample description nTPM
Angular gyrus (white matter)
nTPM: 249.2
1920 Male, age 76, both hemispheres 249.2
Anterior funiculus (white matter)
nTPM: 319.5
2734 Male, age 80, both hemispheres 337.9
2818 Female, age 79, both hemispheres 324.0
2193 Male, age 75, both hemispheres 310.8
2819 Male, age 47, both hemispheres 305.1
Area striata (white matter)
nTPM: 188.2
2258 Female, age 91, left hemisphere 188.2
Cerebellar white matter
nTPM: 312.8
1837 Male, age 76, left hemisphere 438.6
2174 Male, age 61, right hemisphere 356.7
1864 Male, age 80, left hemisphere 326.7
2773 Female, age 85, right hemisphere 288.6
1931 Female, age 91, left hemisphere 260.6
2105 Male, age 74, right hemisphere 205.5
Corpus callosum, genu (white matter)
nTPM: 255.9
1887 Male, age 76, left hemisphere 291.4
1885 Female, age 94, left hemisphere 291.2
1934 Male, age 61, right hemisphere 268.5
2771 Male, age 75, left hemisphere 253.0
1849 Female, age 91, right hemisphere 223.0
1886 Female, age 67, right hemisphere 208.6
Corpus callosum, splenium (white matter)
nTPM: 296.3
2104 Male, age 75, left hemisphere 344.7
1946 Male, age 76, left hemisphere 321.5
2847 Female, age 67, right hemisphere 274.5
2238 Female, age 94, right hemisphere 244.4
Dorsal funiculus (white matter)
nTPM: 304.8
2064 Female, age 79, both hemispheres 349.4
2817 Male, age 47, both hemispheres 305.1
2128 Male, age 75, both hemispheres 298.6
2810 Male, age 90, both hemispheres 295.1
2812 Male, age 66, both hemispheres 275.4
Lateral funiculus (white matter)
nTPM: 362.8
2294 Male, age 66, both hemispheres 416.9
2094 Female, age 79, both hemispheres 392.6
2099 Male, age 90, both hemispheres 322.9
2192 Male, age 75, both hemispheres 318.8
Occipital cortex (white matter)
nTPM: 219.7
2259 Male, age 75, midline 280.4
2257 Female, age 67, both hemispheres 159.1
Parahippocampal cortex (white matter)
nTPM: 218.0
2157 Female, age 91, both hemispheres 218.0
Parieto-temporal junction (white matter)
nTPM: 228.3
2121 Male, age 76, left hemisphere 277.0
1935 Female, age 94, right hemisphere 247.2
2774 Male, age 61, right hemisphere 245.2
1999 Female, age 67, right hemisphere 212.9
2469 Male, age 75, right hemisphere 202.9
2770 Female, age 91, right hemisphere 184.5
Somatomor cortex, precentral gyrus (white matter)
nTPM: 167.9
2439 Male, age 75, right hemisphere 167.9
Somatosensory cortex, postcentral gyrus, ventral (white matter)
nTPM: 162.9
2623 Male, age 75, right hemisphere 162.9
Temporal white matter
nTPM: 268.1
1801 Male, age 76, left hemisphere 310.1
2523 Female, age 94, left hemisphere 302.9
2524 Female, age 85, left hemisphere 289.3
2736 Female, age 91, right hemisphere 245.6
2254 Male, age 75, right hemisphere 192.7

WHITE MATTER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

31.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Corpus callosum
Scaled Tags Per Million: 31.2
FF:10042-101F6 24-68 years, mixed 31.2

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