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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:754.5 nTPM
HPA Brain:681.2 nTPM
GTEx:754.5 nTPM
FANTOM5:799.5 Scaled Tags Per Million
Mouse:0.1 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA008819Antibody CAB013493Antibody CAB080063
Glial cells HighMediumLow
Neuronal cells HighHighLow







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

681.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 571.7
2481 Female, age 94, left hemisphere 716.6
2288 Male, age 75, left hemisphere 653.8
2290 Female, age 72, unknown 590.6
1857 Female, age 85, left hemisphere 565.1
1781 Male, age 74, unknown 554.1
2846 Female, age 79, unknown 551.2
1854 Male, age 80, left hemisphere 500.2
2289 Male, age 61, right hemisphere 441.7
Globus pallidus, externus
nTPM: 625.6
2772 Female, age 79, unknown 757.9
1996 Male, age 80, right hemisphere 721.9
2395 Male, age 75, both hemispheres 704.7
2646 Male, age 61, right hemisphere 565.1
2567 Female, age 72, unknown 378.3
Globus pallidus, internus
nTPM: 681.2
2287 Male, age 75, right hemisphere 972.8
2483 Female, age 94, right hemisphere 894.1
2778 Female, age 91, both hemispheres 734.1
1818 Male, age 74, unknown 604.4
2037 Male, age 80, right hemisphere 596.3
2111 Female, age 85, right hemisphere 551.1
2566 Female, age 72, unknown 415.9
Nucleus accumbens
nTPM: 568.0
2286 Male, age 75, left hemisphere 707.0
2391 Female, age 94, left hemisphere 596.7
1856 Female, age 91, right hemisphere 589.3
2824 Male, age 61, right hemisphere 582.4
1806 Female, age 85, left hemisphere 568.9
1783 Male, age 74, unknown 566.1
2698 Female, age 72, unknown 499.7
2732 Male, age 80, right hemisphere 433.7
Nucleus basalis of Meynert
nTPM: 513.7
2569 Male, age 61, both hemispheres 580.5
2484 Female, age 94, left hemisphere 529.1
2821 Male, age 75, both hemispheres 486.9
2393 Male, age 80, right hemisphere 458.3
Nucleus of the diagonal band
nTPM: 589.2
1812 Female, age 91, both hemispheres 715.1
2775 Male, age 80, right hemisphere 661.9
2029 Male, age 61, right hemisphere 611.2
2195 Female, age 85, both hemispheres 539.6
1979 Male, age 74, unknown 418.1
Putamen
nTPM: 527.9
2482 Female, age 94, left hemisphere 616.0
2466 Female, age 79, unknown 600.7
1937 Female, age 91, right hemisphere 589.3
1829 Male, age 74, unknown 530.7
1838 Male, age 80, right hemisphere 520.9
2647 Male, age 75, left hemisphere 441.2
2489 Female, age 72, unknown 396.7
Septal nuclei
nTPM: 521.4
2031 Female, age 72, unknown 730.0
1960 Male, age 74, unknown 637.8
2009 Female, age 91, both hemispheres 534.6
2059 Female, age 85, both hemispheres 490.7
2629 Female, age 94, right hemisphere 444.9
2394 Male, age 61, left hemisphere 421.7
2199 Male, age 80, right hemisphere 390.1
Stria terminalis, bed nucleus
nTPM: 520.4
1974 Female, age 91, both hemispheres 633.4
2486 Female, age 94, both hemispheres 482.2
2201 Male, age 74, unknown 445.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

754.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 709.1
Samples: 246

Max nTPM: 1328.2
Min nTPM: 364.4
Std nTPM: 158.8
Median nTPM: 695.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1328.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1321.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1305.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1279.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1276.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1221.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1177.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1038.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1024.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1023.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 992.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 979.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 940.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 934.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 928.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 927.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 924.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 915.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 915.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 913.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 905.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 897.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 895.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 893.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 886.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 885.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 883.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 881.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 879.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 878.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 873.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 868.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 860.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 860.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 860.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 858.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 858.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 855.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 854.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 851.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 846.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 839.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 839.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 830.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 827.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 824.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 820.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 817.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 817.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 816.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 809.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 803.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 802.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 796.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 794.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 793.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 788.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 787.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 785.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 784.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 783.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 783.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 783.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 780.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 771.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 770.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 770.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 768.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 766.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 759.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 758.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 758.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 757.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 757.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 757.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 755.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 755.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 753.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 751.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 749.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 748.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 748.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 747.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 746.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 746.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 744.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 744.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 743.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 743.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 743.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 737.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 731.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 731.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 729.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 729.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 725.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 724.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 724.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 723.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 722.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 720.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 719.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 719.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 718.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 717.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 717.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 717.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 714.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 714.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 713.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 713.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 711.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 710.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 709.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 709.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 708.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 707.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 704.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 702.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 700.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 698.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 696.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 695.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 695.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 694.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 693.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 691.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 691.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 688.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 687.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 685.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 681.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 677.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 675.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 675.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 673.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 673.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 671.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 669.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 668.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 666.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 666.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 665.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 663.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 655.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 653.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 653.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 652.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 652.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 651.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 650.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 649.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 649.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 648.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 648.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 648.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 646.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 646.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 644.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 643.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 642.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 642.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 640.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 640.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 639.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 638.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 637.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 635.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 634.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 631.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 627.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 622.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 620.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 619.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 619.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 618.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 618.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 615.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 613.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 612.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 611.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 609.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 605.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 605.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 604.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 601.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 601.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 599.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 598.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 596.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 596.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 595.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 594.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 592.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 592.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 589.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 584.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 583.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 582.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 581.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 581.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 580.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 580.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 580.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 580.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 579.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 577.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 575.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 573.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 569.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 568.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 562.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 560.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 560.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 556.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 555.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 555.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 548.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 546.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 543.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 542.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 540.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 537.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 531.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 527.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 524.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 523.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 519.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 513.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 512.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 511.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 508.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 487.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 477.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 473.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 468.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 465.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 464.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 460.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 441.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 439.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 435.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 432.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 413.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 392.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 364.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 700.8
Samples: 246

Max nTPM: 1277.8
Min nTPM: 201.5
Std nTPM: 140.4
Median nTPM: 695.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1277.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1217.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1175.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1148.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1076.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1054.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1003.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 999.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 973.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 963.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 949.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 943.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 940.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 933.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 932.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 914.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 913.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 907.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 895.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 895.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 883.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 883.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 876.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 870.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 870.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 869.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 861.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 847.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 841.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 837.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 833.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 832.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 829.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 828.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 821.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 820.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 810.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 809.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 808.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 807.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 805.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 805.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 801.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 799.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 796.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 795.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 793.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 789.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 789.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 787.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 787.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 785.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 784.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 782.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 776.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 771.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 766.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 766.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 766.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 766.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 766.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 765.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 764.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 764.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 761.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 760.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 759.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 759.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 753.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 752.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 750.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 748.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 747.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 746.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 745.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 745.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 745.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 744.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 744.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 744.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 744.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 743.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 743.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 742.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 740.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 740.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 739.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 737.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 736.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 736.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 736.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 727.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 724.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 723.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 722.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 718.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 717.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 716.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 715.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 715.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 714.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 713.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 713.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 713.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 712.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 711.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 710.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 710.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 709.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 706.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 705.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 705.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 704.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 704.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 703.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 702.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 702.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 700.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 699.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 699.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 696.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 696.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 695.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 694.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 693.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 692.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 692.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 692.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 690.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 689.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 687.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 685.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 685.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 685.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 682.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 682.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 680.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 679.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 678.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 678.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 673.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 672.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 669.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 669.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 668.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 667.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 667.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 666.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 665.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 664.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 662.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 662.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 661.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 660.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 659.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 657.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 657.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 653.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 653.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 652.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 651.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 651.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 650.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 650.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 649.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 648.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 647.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 645.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 642.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 642.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 642.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 641.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 639.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 638.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 636.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 633.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 633.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 630.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 630.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 628.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 627.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 626.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 626.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 625.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 625.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 624.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 621.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 621.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 617.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 616.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 615.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 614.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 613.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 612.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 608.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 606.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 606.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 603.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 601.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 601.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 600.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 591.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 584.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 583.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 580.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 579.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 578.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 578.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 576.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 576.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 576.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 576.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 576.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 575.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 573.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 571.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 569.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 561.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 561.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 560.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 560.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 554.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 552.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 537.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 537.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 530.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 527.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 521.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 496.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 487.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 481.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 480.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 480.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 477.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 473.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 466.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 462.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 461.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 445.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 436.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 435.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 417.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 411.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 384.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 366.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 201.5
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Brain - Putamen (basal ganglia)
Average nTPM: 754.5
Samples: 205

Max nTPM: 1217.4
Min nTPM: 412.6
Std nTPM: 134.5
Median nTPM: 751.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1217.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1198.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1181.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1127.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1061.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1054.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1050.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1032.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1003.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 988.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 984.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 971.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 960.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 955.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 950.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 941.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 939.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 939.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 931.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 905.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 902.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 901.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 901.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 896.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 893.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 886.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 885.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 881.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 881.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 881.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 880.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 880.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 878.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 873.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 870.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 870.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 864.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 862.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 862.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 861.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 858.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 857.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 857.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 849.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 842.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 842.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 839.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 837.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 836.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 835.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 834.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 834.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 828.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 825.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 825.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 822.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 822.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 819.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 819.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 817.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 815.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 813.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 810.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 807.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 806.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 806.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 803.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 803.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 801.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 798.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 797.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 796.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 796.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 796.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 796.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 795.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 792.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 792.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 789.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 787.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 787.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 783.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 782.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 779.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 778.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 776.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 774.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 774.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 772.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 770.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 769.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 769.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 766.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 760.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 759.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 756.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 755.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 755.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 754.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 753.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 753.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 752.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 751.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 750.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 750.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 744.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 743.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 742.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 742.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 742.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 740.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 739.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 739.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 731.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 731.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 731.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 727.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 726.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 721.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 721.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 720.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 720.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 718.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 717.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 711.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 711.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 709.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 708.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 707.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 706.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 705.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 704.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 704.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 704.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 700.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 696.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 696.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 694.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 692.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 691.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 690.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 687.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 685.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 682.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 678.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 678.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 674.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 670.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 663.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 660.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 660.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 659.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 659.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 658.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 658.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 656.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 652.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 649.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 649.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 648.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 644.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 642.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 640.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 638.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 635.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 634.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 634.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 632.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 631.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 630.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 629.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 627.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 627.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 626.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 624.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 623.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 619.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 617.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 610.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 605.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 602.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 597.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 589.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 587.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 587.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 586.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 582.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 576.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 573.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 571.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 571.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 570.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 568.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 564.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 562.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 552.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 538.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 527.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 525.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 521.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 517.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 500.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 492.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 469.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 412.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

799.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 510.2
FF:10164-103B2 76 years, female 510.2
Nucleus accumbens
Scaled Tags Per Million: 727.9
FF:10037-101F1 23-56 years, mixed 727.9
Putamen
Scaled Tags Per Million: 713.6
FF:10176-103C5 60 years, female 713.6
Globus pallidus
Scaled Tags Per Million: 799.5
FF:10175-103C4 60 years, female 1073.5
FF:10161-103A8 76 years, female 525.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.2
Septum
nTPM: 0.1
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.3
Sample C Female 0.0
Sample D Female 0.0
Ventral forebrain
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
71919523 Antisense, RP_051012_02_E12, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.0
71919523 Antisense, RP_051012_02_E12, Mouse strain C57BL/6J (56 days, male) 0.0

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