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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:691.2 nTPM
FANTOM5:760.7 Scaled Tags Per Million
Allen mouse:0.0 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

691.2
Sample id Sample description nTPM
Area postrema
nTPM: 535.2
2799 Male, age 61, both hemispheres 566.6
2306 Male, age 80, both hemispheres 527.7
2054 Male, age 76, both hemispheres 511.2
Dorsal medullary reticular nucleus
nTPM: 575.5
2040 Female, age 85, both hemispheres 717.6
2088 Male, age 76, both hemispheres 524.4
2373 Male, age 61, both hemispheres 484.6
Dorsal motor vagal complex
nTPM: 542.2
2000 Male, age 74, unknown 641.5
2844 Male, age 55, unknown 637.8
2133 Female, age 91, both hemispheres 611.4
2797 Male, age 61, both hemispheres 569.2
2643 Male, age 74, both hemispheres 525.7
2185 Male, age 76, both hemispheres 523.2
2813 Female, age 72, unknown 484.0
2807 Female, age 85, both hemispheres 344.8
Gigantocellular reticular nuclei, medullary
nTPM: 611.6
2462 Male, age 74, both hemispheres 654.0
2314 Male, age 61, both hemispheres 651.6
1876 Female, age 85, both hemispheres 640.0
2022 Male, age 76, right hemisphere 616.9
2387 Female, age 91, both hemispheres 583.2
2310 Male, age 80, both hemispheres 523.6
Gigantocellular reticular nuclei, pars
nTPM: 555.5
2168 Male, age 76, both hemispheres 661.3
2084 Female, age 85, both hemispheres 643.2
2336 Male, age 61, both hemispheres 530.6
2330 Male, age 80, both hemispheres 479.7
2706 Male, age 80, both hemispheres 462.6
Inferior olive
nTPM: 650.8
2563 Male, age 74, both hemispheres 874.0
2085 Female, age 85, both hemispheres 766.9
2178 Male, age 61, both hemispheres 578.9
2379 Male, age 80, both hemispheres 533.8
2628 Female, age 91, both hemispheres 500.3
Lateral medullary reticular nucleus
nTPM: 668.2
2305 Male, age 74, both hemispheres 825.9
2044 Male, age 76, both hemispheres 684.8
2804 Female, age 91, both hemispheres 668.5
2190 Female, age 85, both hemispheres 642.9
2852 Male, age 80, both hemispheres 639.2
2374 Male, age 61, both hemispheres 547.8
Medial olivary nucleus
nTPM: 629.9
2138 Female, age 91, both hemispheres 769.8
1962 Male, age 76, both hemispheres 670.0
1943 Male, age 61, both hemispheres 587.8
2851 Male, age 80, both hemispheres 491.9
Medial vestibular nucleus
nTPM: 632.1
2801 Male, age 74, both hemispheres 722.0
2803 Female, age 91, both hemispheres 674.6
2093 Male, age 80, both hemispheres 669.6
2743 Female, age 85, both hemispheres 647.7
2134 Male, age 76, both hemispheres 592.5
2624 Male, age 61, both hemispheres 486.4
Motor hypoglossal nucleus
nTPM: 551.1
2125 Female, age 91, both hemispheres 732.2
2132 Female, age 85, both hemispheres 626.8
2182 Male, age 80, both hemispheres 491.9
2277 Male, age 76, both hemispheres 482.7
2461 Male, age 61, both hemispheres 421.9
Nucleus ambiguus
nTPM: 675.0
2071 Male, age 76, both hemispheres 745.8
2096 Female, age 85, both hemispheres 604.2
Nucleus cuneatus
nTPM: 529.4
2564 Male, age 74, both hemispheres 725.1
2376 Male, age 61, both hemispheres 555.8
2100 Male, age 76, both hemispheres 544.5
2131 Male, age 76, both hemispheres 525.9
2380 Male, age 80, both hemispheres 503.3
2562 Male, age 61, both hemispheres 499.6
2808 Female, age 85, both hemispheres 488.4
2381 Male, age 80, both hemispheres 479.4
2805 Female, age 91, both hemispheres 442.6
Nucleus gracilis
nTPM: 530.9
2627 Male, age 74, both hemispheres 676.9
2382 Male, age 80, both hemispheres 485.7
2299 Female, age 85, both hemispheres 430.1
Nucleus raphe obscurus
nTPM: 665.9
2845 Female, age 85, midline 717.1
2142 Male, age 76, midline 645.2
2800 Male, age 61, midline 635.3
Nucleus raphe pallidus
nTPM: 654.1
1924 Male, age 61, midline 723.6
2145 Male, age 76, midline 636.3
2183 Male, age 80, midline 602.5
Nucleus tractus solitarii
nTPM: 457.0
2144 Female, age 91, right hemisphere 581.4
2656 Male, age 76, both hemispheres 519.5
2191 Female, age 85, both hemispheres 392.5
2307 Male, age 80, both hemispheres 334.6
Parvicellular reticular nuclei
nTPM: 582.0
2119 Male, age 80, both hemispheres 650.2
2095 Male, age 76, both hemispheres 619.6
2558 Male, age 74, both hemispheres 476.1
Parvicellular reticular nuclei, medullary
nTPM: 596.2
2189 Female, age 91, both hemispheres 642.6
2091 Female, age 85, both hemispheres 585.3
2181 Male, age 80, left hemisphere 560.5
Peritrigeminal nucleus
nTPM: 691.2
2067 Female, age 85, both hemispheres 708.5
2136 Male, age 76, both hemispheres 698.2
2179 Male, age 61, both hemispheres 666.8
Prepositus hypoglossal nucleus
nTPM: 601.9
2855 Female, age 85, right hemisphere 674.2
2086 Male, age 80, both hemispheres 529.6
Spinal trigeminal nucleus, caudal
nTPM: 573.6
2390 Female, age 91, both hemispheres 633.8
2447 Male, age 76, both hemispheres 613.1
2308 Male, age 80, both hemispheres 558.6
2642 Male, age 74, both hemispheres 533.5
2312 Male, age 61, both hemispheres 529.1
Spinal trigeminal nucleus, interpolar
nTPM: 632.0
2066 Male, age 76, right hemisphere 775.9
2033 Male, age 80, both hemispheres 607.8
2625 Male, age 61, both hemispheres 600.7
2386 Female, age 85, both hemispheres 591.6
2389 Female, age 91, both hemispheres 583.9
Spinal vestibular nucleus
nTPM: 624.0
2186 Female, age 91, both hemispheres 673.8
2748 Male, age 76, both hemispheres 661.0
2806 Female, age 85, both hemispheres 655.2
2780 Male, age 80, both hemispheres 650.9
2384 Male, age 74, both hemispheres 615.0
2796 Male, age 61, both hemispheres 488.2
Superior vestibular nucleus
nTPM: 659.5
2383 Male, age 74, both hemispheres 697.7
2015 Male, age 80, both hemispheres 644.6
2061 Male, age 76, both hemispheres 636.3
Ventral medullary reticular nucleus
nTPM: 599.1
2060 Male, age 76, both hemispheres 625.9
2372 Male, age 61, both hemispheres 572.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 642.7
1986 Male, age 76, both hemispheres 698.6
2302 Female, age 91, both hemispheres 677.5
2741 Female, age 85, both hemispheres 663.7
2180 Male, age 61, both hemispheres 623.4
2118 Male, age 80, both hemispheres 550.3

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

760.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 760.7
FF:10174-103C3 60 years, female 977.8
FF:10038-101F2 18-64 years, mixed 726.3
FF:10155-103A2 76 years, female 578.0

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.0
71919523 Antisense, RP_051012_02_E12, Mouse strain C57BL/6J (56 days, male) 0.0

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