HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:176.8 nTPM
HPA Brain:383.6 nTPM
GTEx:176.8 nTPM
FANTOM5:316.1 Scaled Tags Per Million
Pig:625.3 nTPM
Mouse:340.9 nTPM
Allen mouse:21.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002728
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 383.6
Sample id Sample description nTPM
Hippocampus
nTPM: 295.0
1898 Male, age 80, left hemisphere 365.6
2621 Female, age 67, right hemisphere 311.0
2529 Female, age 94, left hemisphere 289.9
2148 Female, age 91, left hemisphere 285.2
1855 Male, age 76, left hemisphere 263.9
1911 Female, age 85, right hemisphere 254.2
Dentate gyrus
nTPM: 356.1
2530 Female, age 94, left hemisphere 494.8
1927 Female, age 91, both hemispheres 381.0
2528 Male, age 74, both hemispheres 377.2
2010 Male, age 76, both hemispheres 298.5
2531 Female, age 67, both hemispheres 295.9
2246 Female, age 85, both hemispheres 289.6
Entorhinal gyrus
nTPM: 352.3
2613 Female, age 94, left hemisphere 469.5
2764 Male, age 80, right hemisphere 403.4
1938 Female, age 85, left hemisphere 358.5
1787 Male, age 76, left hemisphere 339.1
2117 Female, age 91, right hemisphere 310.7
2686 Male, age 75, right hemisphere 233.0
Hippocampus, CA1
nTPM: 357.7
2749 Male, age 80, left hemisphere 539.2
2527 Male, age 74, both hemispheres 344.8
2082 Female, age 91, right hemisphere 319.8
1873 Female, age 85, both hemispheres 308.6
2045 Male, age 76, both hemispheres 275.9
Hippocampus, CA2
nTPM: 357.1
2249 Male, age 74, both hemispheres 438.2
1963 Male, age 80, left hemisphere 390.4
1892 Male, age 76, both hemispheres 380.4
2437 Female, age 94, left hemisphere 374.9
2113 Female, age 91, right hemisphere 285.2
1940 Female, age 85, left hemisphere 273.6
Hippocampus, CA3
nTPM: 371.7
2436 Male, age 74, both hemispheres 571.6
2137 Male, age 80, left hemisphere 423.4
2620 Female, age 94, left hemisphere 371.4
1867 Male, age 76, both hemispheres 325.6
1891 Female, age 85, both hemispheres 276.3
2861 Female, age 67, both hemispheres 262.1
Parahippocampal cortex
nTPM: 301.9
1990 Female, age 91, right hemisphere 381.3
2250 Female, age 67, right hemisphere 344.8
1850 Male, age 80, both hemispheres 328.7
2245 Female, age 91, both hemispheres 328.7
2693 Female, age 94, both hemispheres 322.1
1933 Female, age 85, both hemispheres 320.2
2532 Female, age 72, left hemisphere 277.0
2692 Male, age 74, both hemispheres 251.0
2018 Male, age 76, both hemispheres 241.7
2622 Female, age 67, right hemisphere 223.0
Perirhinal gyrus
nTPM: 383.6
1847 Female, age 91, left hemisphere 478.1
1794 Male, age 80, right hemisphere 423.5
2521 Female, age 94, right hemisphere 371.0
1841 Female, age 85, right hemisphere 350.6
2848 Male, age 76, right hemisphere 294.6
Subiculum
nTPM: 298.4
1977 Female, age 85, both hemispheres 382.1
1901 Male, age 80, both hemispheres 341.5
2619 Male, age 74, both hemispheres 312.4
2438 Female, age 94, left hemisphere 285.7
2729 Female, age 91, right hemisphere 238.9
2042 Male, age 76, both hemispheres 229.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 176.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 176.8
Samples: 197

Max nTPM: 380.7
Min nTPM: 25.9
Std nTPM: 64.7
Median nTPM: 165.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 380.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 358.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 330.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 324.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 310.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 307.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 304.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 299.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 295.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 292.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 289.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 316.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 316.1
FF:10169-103B7 60 years, female 341.6
FF:10153-102I9 76 years, female 290.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 625.3
Pig sample Sample description nTPM
Subiculum
nTPM: 477.6
Samples: 4

Max nTPM: 626.7
Min nTPM: 362.3
Sample A Female 626.7
Sample B Female 429.4
Sample C Male 492.0
Sample D Male 362.3
Dorsal hippocampus
nTPM: 574.5
Samples: 4

Max nTPM: 753.9
Min nTPM: 432.5
Sample A Female 753.9
Sample B Female 609.5
Sample C Male 502.0
Sample D Male 432.5
Entorhinal cortex
nTPM: 453.5
Samples: 4

Max nTPM: 504.0
Min nTPM: 375.4
Sample A Female 504.0
Sample B Female 443.1
Sample C Male 491.6
Sample D Male 375.4
Ventral hippocampus
nTPM: 625.3
Samples: 4

Max nTPM: 816.4
Min nTPM: 384.2
Sample A Female 708.0
Sample B Female 384.2
Sample C Male 816.4
Sample D Male 592.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 340.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 307.8
Samples: 4

Max nTPM: 326.8
Min nTPM: 298.0
Sample A Male 306.7
Sample B Male 298.0
Sample C Female 299.6
Sample D Female 326.8
Hippocampal formation
nTPM: 340.9
Samples: 4

Max nTPM: 393.2
Min nTPM: 277.9
Sample A Male 277.9
Sample B Male 338.8
Sample C Female 353.8
Sample D Female 393.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 21.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.7
74635072 Antisense, RP_060215_03_C09, Mouse strain C57BL/6J (56 days, male) 21.7

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