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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:572.7 nTPM
HPA Brain:277.7 nTPM
GTEx:572.7 nTPM
FANTOM5:243.5 Scaled Tags Per Million
Pig:418.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA046859Antibody HPA063034
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

277.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 207.6
2481 Female, age 94, left hemisphere 270.5
1854 Male, age 80, left hemisphere 221.1
1781 Male, age 74, unknown 218.4
1857 Female, age 85, left hemisphere 205.5
2846 Female, age 79, unknown 204.3
2290 Female, age 72, unknown 194.3
2288 Male, age 75, left hemisphere 184.9
2289 Male, age 61, right hemisphere 161.6
Globus pallidus, externus
nTPM: 277.7
2772 Female, age 79, unknown 323.0
2395 Male, age 75, both hemispheres 320.8
1996 Male, age 80, right hemisphere 282.2
2646 Male, age 61, right hemisphere 244.9
2567 Female, age 72, unknown 217.8
Globus pallidus, internus
nTPM: 277.4
1818 Male, age 74, unknown 294.1
2778 Female, age 91, both hemispheres 288.4
2287 Male, age 75, right hemisphere 287.7
2483 Female, age 94, right hemisphere 282.9
2037 Male, age 80, right hemisphere 274.5
2566 Female, age 72, unknown 262.9
2111 Female, age 85, right hemisphere 251.3
Nucleus accumbens
nTPM: 211.6
2391 Female, age 94, left hemisphere 265.3
2698 Female, age 72, unknown 247.4
2286 Male, age 75, left hemisphere 219.9
2732 Male, age 80, right hemisphere 210.8
1806 Female, age 85, left hemisphere 197.4
1856 Female, age 91, right hemisphere 193.9
1783 Male, age 74, unknown 182.9
2824 Male, age 61, right hemisphere 175.2
Nucleus basalis of Meynert
nTPM: 262.0
2821 Male, age 75, both hemispheres 353.9
2569 Male, age 61, both hemispheres 263.0
2393 Male, age 80, right hemisphere 227.4
2484 Female, age 94, left hemisphere 203.9
Nucleus of the diagonal band
nTPM: 229.9
1812 Female, age 91, both hemispheres 267.3
2775 Male, age 80, right hemisphere 262.3
2195 Female, age 85, both hemispheres 225.0
1979 Male, age 74, unknown 206.4
2029 Male, age 61, right hemisphere 188.4
Putamen
nTPM: 206.2
2482 Female, age 94, left hemisphere 275.8
2647 Male, age 75, left hemisphere 242.4
2489 Female, age 72, unknown 202.7
1937 Female, age 91, right hemisphere 199.6
1838 Male, age 80, right hemisphere 183.6
2466 Female, age 79, unknown 170.5
1829 Male, age 74, unknown 168.7
Septal nuclei
nTPM: 225.3
2199 Male, age 80, right hemisphere 256.8
1960 Male, age 74, unknown 253.4
2629 Female, age 94, right hemisphere 225.2
2031 Female, age 72, unknown 213.7
2059 Female, age 85, both hemispheres 213.2
2394 Male, age 61, left hemisphere 212.5
2009 Female, age 91, both hemispheres 202.1
Stria terminalis, bed nucleus
nTPM: 203.5
1974 Female, age 91, both hemispheres 228.4
2201 Male, age 74, unknown 217.8
2486 Female, age 94, both hemispheres 164.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

572.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 491.2
Samples: 246

Max nTPM: 945.5
Min nTPM: 222.8
Std nTPM: 132.8
Median nTPM: 465.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 945.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 917.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 845.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 844.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 840.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 833.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 824.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 823.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 809.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 808.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 794.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 792.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 775.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 773.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 751.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 733.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 732.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 728.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 697.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 691.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 682.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 668.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 668.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 662.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 656.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 653.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 652.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 651.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 645.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 637.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 632.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 632.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 631.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 630.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 625.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 625.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 623.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 619.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 616.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 616.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 610.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 608.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 607.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 606.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 605.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 605.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 598.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 594.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 594.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 592.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 584.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 582.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 580.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 579.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 579.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 578.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 578.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 578.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 575.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 574.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 573.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 570.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 568.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 565.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 564.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 563.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 562.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 555.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 554.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 553.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 551.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 551.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 543.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 538.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 536.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 535.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 533.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 532.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 530.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 529.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 524.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 523.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 523.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 519.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 516.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 515.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 514.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 513.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 511.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 511.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 510.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 509.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 506.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 506.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 502.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 501.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 498.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 497.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 494.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 493.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 493.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 489.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 488.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 487.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 487.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 486.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 486.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 484.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 483.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 482.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 481.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 481.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 477.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 476.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 472.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 472.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 469.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 469.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 469.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 469.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 468.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 468.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 465.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 465.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 463.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 462.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 461.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 461.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 460.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 457.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 456.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 454.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 453.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 453.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 452.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 451.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 451.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 451.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 451.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 450.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 450.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 449.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 449.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 448.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 447.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 447.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 447.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 447.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 446.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 445.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 441.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 437.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 437.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 437.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 436.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 436.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 435.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 434.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 434.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 434.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 433.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 432.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 431.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 430.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 430.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 429.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 428.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 428.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 428.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 423.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 421.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 418.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 418.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 414.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 414.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 414.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 412.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 412.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 410.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 409.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 409.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 404.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 400.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 398.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 397.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 396.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 395.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 392.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 388.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 387.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 385.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 385.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 384.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 381.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 381.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 379.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 378.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 376.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 376.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 374.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 370.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 370.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 368.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 367.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 367.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 361.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 361.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 357.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 357.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 357.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 356.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 356.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 354.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 353.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 353.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 353.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 350.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 344.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 343.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 342.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 341.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 340.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 339.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 334.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 334.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 331.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 330.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 328.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 326.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 325.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 324.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 321.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 321.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 318.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 317.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 316.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 302.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 301.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 298.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 296.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 296.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 274.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 271.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 262.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 258.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 222.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 491.6
Samples: 246

Max nTPM: 1304.4
Min nTPM: 211.8
Std nTPM: 160.2
Median nTPM: 459.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1304.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1241.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1017.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1003.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 935.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 906.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 898.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 879.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 875.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 857.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 852.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 849.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 822.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 815.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 761.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 760.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 752.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 741.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 733.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 722.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 718.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 702.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 687.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 682.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 671.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 668.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 661.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 659.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 658.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 655.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 654.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 649.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 643.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 641.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 634.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 632.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 631.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 631.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 623.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 614.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 610.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 609.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 608.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 604.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 603.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 602.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 600.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 596.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 592.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 585.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 582.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 581.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 580.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 579.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 577.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 576.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 575.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 573.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 573.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 570.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 569.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 567.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 565.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 562.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 558.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 555.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 554.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 554.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 551.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 550.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 545.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 545.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 544.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 539.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 537.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 527.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 525.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 521.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 519.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 516.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 513.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 512.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 511.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 508.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 506.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 502.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 501.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 498.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 497.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 496.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 496.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 495.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 494.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 494.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 493.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 492.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 490.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 490.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 488.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 486.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 485.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 485.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 485.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 482.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 482.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 481.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 481.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 481.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 480.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 477.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 477.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 474.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 473.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 473.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 472.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 471.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 468.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 468.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 466.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 462.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 461.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 461.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 460.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 458.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 456.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 455.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 454.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 451.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 451.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 449.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 449.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 448.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 448.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 447.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 447.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 447.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 447.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 444.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 441.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 438.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 438.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 433.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 433.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 432.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 431.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 430.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 429.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 429.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 425.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 422.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 419.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 418.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 418.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 417.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 417.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 415.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 414.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 413.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 409.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 408.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 407.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 407.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 407.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 406.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 405.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 404.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 404.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 401.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 401.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 399.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 397.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 396.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 395.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 395.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 395.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 394.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 394.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 392.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 390.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 388.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 388.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 385.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 383.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 382.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 382.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 380.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 377.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 377.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 375.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 375.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 374.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 373.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 372.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 371.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 371.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 371.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 370.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 369.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 368.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 367.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 364.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 364.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 362.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 362.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 359.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 357.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 357.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 356.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 355.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 352.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 350.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 347.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 342.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 340.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 340.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 339.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 338.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 336.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 335.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 333.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 329.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 327.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 327.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 326.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 326.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 325.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 324.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 324.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 320.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 320.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 318.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 315.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 314.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 313.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 311.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 309.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 306.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 302.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 295.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 289.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 275.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 273.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 272.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 266.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 259.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 211.8
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 572.7
Samples: 205

Max nTPM: 1160.4
Min nTPM: 161.8
Std nTPM: 156.2
Median nTPM: 551.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1160.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1094.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1035.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1020.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 949.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 934.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 886.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 866.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 860.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 856.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 852.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 834.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 833.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 832.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 826.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 825.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 815.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 814.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 812.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 806.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 798.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 797.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 783.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 781.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 761.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 761.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 751.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 746.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 745.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 740.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 733.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 730.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 721.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 709.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 707.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 706.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 706.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 703.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 703.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 700.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 699.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 699.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 696.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 694.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 691.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 685.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 671.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 669.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 663.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 663.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 659.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 658.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 655.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 652.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 652.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 648.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 646.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 642.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 637.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 635.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 629.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 628.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 627.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 624.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 620.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 618.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 616.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 615.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 605.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 605.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 603.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 599.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 596.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 596.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 595.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 595.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 588.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 583.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 579.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 578.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 577.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 576.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 576.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 575.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 575.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 574.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 572.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 572.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 570.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 567.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 566.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 565.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 563.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 562.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 561.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 560.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 557.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 557.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 554.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 553.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 553.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 551.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 551.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 548.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 546.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 545.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 541.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 540.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 540.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 537.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 537.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 536.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 535.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 535.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 530.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 529.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 528.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 528.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 522.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 518.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 513.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 513.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 512.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 510.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 508.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 507.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 506.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 504.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 503.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 502.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 502.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 502.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 501.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 501.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 500.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 499.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 495.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 495.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 494.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 494.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 490.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 486.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 483.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 482.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 479.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 478.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 478.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 478.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 476.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 475.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 474.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 469.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 467.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 467.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 466.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 463.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 455.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 454.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 452.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 452.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 452.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 451.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 450.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 448.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 447.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 446.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 442.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 436.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 435.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 433.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 433.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 430.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 428.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 428.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 428.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 428.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 425.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 424.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 423.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 418.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 418.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 411.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 409.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 406.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 401.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 401.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 393.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 383.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 376.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 373.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 367.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 366.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 366.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 363.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 361.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 361.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 356.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 356.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 331.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 330.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 329.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 329.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 300.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 293.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 161.8
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

243.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 204.5
FF:10164-103B2 76 years, female 204.5
Nucleus accumbens
Scaled Tags Per Million: 89.6
FF:10037-101F1 23-56 years, mixed 89.6
Putamen
Scaled Tags Per Million: 210.8
FF:10176-103C5 60 years, female 210.8
Globus pallidus
Scaled Tags Per Million: 243.5
FF:10161-103A8 76 years, female 257.8
FF:10175-103C4 60 years, female 229.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

418.0
Pig sample Sample description nTPM
Caudate
nTPM: 295.0
Samples: 4

Max nTPM: 351.7
Min nTPM: 253.9
Sample A Female 253.9
Sample B Female 307.5
Sample C Male 351.7
Sample D Male 267.0
Putamen
nTPM: 418.1
Samples: 4

Max nTPM: 573.9
Min nTPM: 347.7
Sample A Female 359.9
Sample B Female 347.7
Sample C Male 573.9
Sample D Male 390.7
Septum
nTPM: 354.0
Samples: 4

Max nTPM: 406.7
Min nTPM: 314.3
Sample A Female 379.2
Sample B Female 315.6
Sample C Male 406.7
Sample D Male 314.3
Ventral pallidum
nTPM: 325.9
Samples: 4

Max nTPM: 381.9
Min nTPM: 262.4
Sample A Female 277.5
Sample B Female 381.9
Sample C Male 381.9
Sample D Male 262.4

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