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HSP90AB1
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  • HSP90AB1
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Endocrine cells: High
Enterocytes: High
Enterocytes - Microvilli: Not detected
Goblet cells: High
Paneth cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:323.1 nTPM
HPA:217.5 nTPM
GTEx:323.1 nTPM
FANTOM5:652.6 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA072606Antibody HPA074351Antibody CAB005230
Endocrine cells --High
Enterocytes --High
Enterocytes - Microvilli --Not detected
Glandular cells LowHigh-
Goblet cells --High
Paneth cells --Not detected







SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

217.5
overview
Male, age 65
Small intestine sample 232
nTPM: 266.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 204
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 186.5
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 212.8

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

323.1
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 323.1
Samples: 187

Max nTPM: 802.1
Min nTPM: 156.8
Std nTPM: 106.0
Median nTPM: 305.9
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 802.1
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 786.0
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 769.6
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 633.9
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 540.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 522.7
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 508.4
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 507.4
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 503.7
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 489.0
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 485.7
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 481.1
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 479.0
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 476.6
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 475.8
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 473.5
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 471.2
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 452.2
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 449.8
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 443.5
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 440.0
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 434.8
GTEX-14PK6-1626-SM-6871I 70-79 years, female 432.3
GTEX-1192X-2526-SM-59868 50-59 years, male 431.2
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 431.1
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 430.6
GTEX-183FY-1626-SM-793D8 20-29 years, male 427.4
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 424.1
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 423.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 419.8
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 418.4
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 416.8
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 416.1
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 410.4
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 408.7
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 407.6
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 405.5
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 402.4
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 398.4
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 395.8
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 394.5
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 394.2
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 385.8
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 383.7
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 378.6
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 378.2
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 372.3
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 370.6
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 370.2
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 368.2
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 366.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 364.3
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 362.7
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 362.3
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 359.9
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 359.2
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 356.4
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 352.9
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 350.6
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 348.6
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 348.3
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 344.0
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 343.5
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 343.4
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 343.1
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 340.1
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 340.0
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 338.4
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 338.1
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 337.9
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 336.1
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 334.5
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 333.8
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 333.8
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 328.2
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 327.6
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 326.8
GTEX-1C475-1426-SM-793CH 40-49 years, female 326.0
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 325.7
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 324.0
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 324.0
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 322.6
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 318.9
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 317.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 312.9
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 310.4
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 310.1
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 308.6
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 308.5
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 308.4
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 307.4
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 306.5
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 306.2
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 305.9
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 305.6
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 301.7
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 300.5
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 298.8
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 298.2
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 297.8
GTEX-13O61-1326-SM-5KM31 60-69 years, male 294.9
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 293.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 292.9
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 291.4
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 290.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 290.5
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 289.8
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 289.5
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 289.5
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 288.7
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 287.0
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 285.1
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 284.5
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 281.7
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 281.4
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 280.2
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 278.1
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 277.9
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 275.9
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 275.7
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 273.8
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 273.0
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 270.1
GTEX-144GM-1026-SM-79OKU 20-29 years, male 267.4
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 267.2
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 266.5
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 266.3
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 265.3
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 265.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 264.9
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 262.5
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 262.1
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 261.8
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 260.3
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 259.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 259.2
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 258.2
GTEX-YFCO-1326-SM-664NV 40-49 years, male 257.2
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 256.0
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 254.4
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 250.7
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 248.0
GTEX-13113-1226-SM-5EGHT 60-69 years, female 247.3
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 246.9
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 246.7
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 245.1
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 238.7
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 238.7
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 238.2
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 237.2
GTEX-ZTSS-0926-SM-59865 40-49 years, male 237.1
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 236.7
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 235.8
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 232.3
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 231.8
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 231.0
GTEX-14PKU-1626-SM-6871C 40-49 years, female 227.6
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 226.3
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 226.2
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 222.9
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 221.3
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 220.7
GTEX-14PN3-2026-SM-68729 60-69 years, female 220.0
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 219.3
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 219.1
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 215.5
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 215.1
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 211.9
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 210.7
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 205.8
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 205.2
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 203.2
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 200.6
GTEX-1122O-1326-SM-5H11F 60-69 years, female 200.4
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 200.3
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 198.4
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 195.7
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 195.6
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 195.5
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 187.5
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 184.8
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 178.9
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 163.6
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 160.6
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 157.8
GTEX-111YS-1426-SM-5GID8 60-69 years, male 157.5
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 156.8
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

652.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 652.6
FF:10024-101D6 15,40,85 years, mixed 652.6

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