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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:493.2 nTPM
GTEx:493.2 nTPM
FANTOM5:4271.6 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA072606Antibody HPA074351Antibody CAB005230
Squamous epithelial cells LowLowLow





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

493.2
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 493.2
Samples: 156

Max nTPM: 1554.5
Min nTPM: 295.2
Std nTPM: 156.2
Median nTPM: 458.0
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 1554.5
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1182.7
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1066.6
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 915.9
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 869.9
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 808.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 761.3
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 741.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 722.3
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 710.1
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 708.3
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 706.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 667.5
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 667.1
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 664.2
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 661.7
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 629.1
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 625.4
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 618.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 611.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 603.0
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 595.1
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 587.8
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 583.4
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 577.8
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 576.7
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 574.0
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 571.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 570.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 567.4
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 566.7
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 558.6
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 555.5
GTEX-14PKU-1326-SM-6871B 40-49 years, female 549.5
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 548.3
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 546.9
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 542.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 541.1
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 537.8
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 532.3
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 532.0
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 527.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 526.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 526.1
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 523.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 522.2
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 517.8
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 515.1
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 512.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 510.5
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 509.0
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 508.2
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 506.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 504.8
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 502.7
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 502.1
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 502.1
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 497.6
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 495.4
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 492.8
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 490.4
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 487.8
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 485.3
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 484.6
GTEX-16NPV-2526-SM-6M483 50-59 years, female 475.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 474.6
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 472.8
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 465.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 463.5
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 462.4
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 461.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 461.2
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 460.7
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 460.6
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 460.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 460.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 459.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 458.5
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 457.6
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 455.8
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 454.2
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 453.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 452.3
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 451.0
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 446.2
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 445.2
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 444.2
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 444.1
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 441.8
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 437.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 436.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 436.1
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 436.1
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 435.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 435.3
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 435.1
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 434.8
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 433.9
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 429.5
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 428.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 426.6
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 426.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 424.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 421.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 421.2
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 421.2
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 416.2
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 415.9
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 413.0
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 412.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 412.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 410.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 410.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 406.3
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 404.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 402.7
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 402.0
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 400.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 400.3
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 399.3
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 395.5
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 395.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 393.7
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 392.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 390.8
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 390.3
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 390.2
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 390.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 389.4
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 386.2
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 385.4
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 379.3
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 378.8
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 378.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 377.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 373.5
GTEX-1C475-0526-SM-793AC 40-49 years, female 373.4
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 369.1
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 368.6
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 367.6
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 367.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 365.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 365.1
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 364.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 361.0
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 360.8
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 360.5
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 360.1
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 354.6
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 347.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 336.4
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 306.6
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 306.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 299.5
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 298.1
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 295.2
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

4271.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 4271.6
FF:10204-103F6 68 years, female 4271.6

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