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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:85.9 nTPM
HPA Brain:130.1 nTPM
GTEx:85.9 nTPM
FANTOM5:106.2 Scaled Tags Per Million
Pig:63.8 nTPM
Mouse:346.7 nTPM
Allen mouse:13.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA025735Antibody HPA025762
Glial cells MediumLow
Neuronal cells HighHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 62.0
1781 Male, age 74, unknown 81.7
1857 Female, age 85, left hemisphere 71.9
2288 Male, age 75, left hemisphere 69.1
2846 Female, age 79, unknown 66.0
2290 Female, age 72, unknown 60.6
1854 Male, age 80, left hemisphere 56.7
2289 Male, age 61, right hemisphere 46.7
2481 Female, age 94, left hemisphere 43.5
Globus pallidus, externus
nTPM: 42.8
2772 Female, age 79, unknown 73.2
2395 Male, age 75, both hemispheres 53.2
1996 Male, age 80, right hemisphere 37.6
2646 Male, age 61, right hemisphere 27.6
2567 Female, age 72, unknown 22.3
Globus pallidus, internus
nTPM: 43.6
1818 Male, age 74, unknown 67.7
2287 Male, age 75, right hemisphere 60.4
2037 Male, age 80, right hemisphere 40.9
2483 Female, age 94, right hemisphere 38.7
2778 Female, age 91, both hemispheres 32.8
2566 Female, age 72, unknown 32.4
2111 Female, age 85, right hemisphere 32.3
Nucleus accumbens
nTPM: 70.5
1856 Female, age 91, right hemisphere 125.0
1783 Male, age 74, unknown 77.4
1806 Female, age 85, left hemisphere 73.6
2824 Male, age 61, right hemisphere 72.2
2286 Male, age 75, left hemisphere 65.1
2698 Female, age 72, unknown 60.5
2732 Male, age 80, right hemisphere 48.5
2391 Female, age 94, left hemisphere 41.5
Nucleus basalis of Meynert
nTPM: 52.9
2821 Male, age 75, both hemispheres 80.2
2484 Female, age 94, left hemisphere 59.3
2393 Male, age 80, right hemisphere 49.0
2569 Male, age 61, both hemispheres 23.0
Nucleus of the diagonal band
nTPM: 124.3
1812 Female, age 91, both hemispheres 160.5
2775 Male, age 80, right hemisphere 139.6
2029 Male, age 61, right hemisphere 117.6
2195 Female, age 85, both hemispheres 115.0
1979 Male, age 74, unknown 88.7
Putamen
nTPM: 59.1
1937 Female, age 91, right hemisphere 91.3
2466 Female, age 79, unknown 71.7
1838 Male, age 80, right hemisphere 69.2
1829 Male, age 74, unknown 55.5
2647 Male, age 75, left hemisphere 49.2
2482 Female, age 94, left hemisphere 45.7
2489 Female, age 72, unknown 30.9
Septal nuclei
nTPM: 107.4
2009 Female, age 91, both hemispheres 136.9
1960 Male, age 74, unknown 136.7
2031 Female, age 72, unknown 135.4
2629 Female, age 94, right hemisphere 104.0
2059 Female, age 85, both hemispheres 87.7
2394 Male, age 61, left hemisphere 79.7
2199 Male, age 80, right hemisphere 71.2
Stria terminalis, bed nucleus
nTPM: 130.1
1974 Female, age 91, both hemispheres 175.3
2486 Female, age 94, both hemispheres 125.3
2201 Male, age 74, unknown 89.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 61.4
Samples: 246

Max nTPM: 154.2
Min nTPM: 12.6
Std nTPM: 31.1
Median nTPM: 60.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 154.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 149.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 136.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 134.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 134.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 126.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 125.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 123.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 115.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 115.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 113.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 113.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 110.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 110.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 109.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 109.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 109.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 108.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 108.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 107.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 106.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 105.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 105.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 105.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 104.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 102.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 102.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 102.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 102.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 101.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 100.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 99.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 98.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 98.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 97.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 97.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 96.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 95.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 95.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 95.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 94.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 94.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 93.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 92.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 92.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 91.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 91.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 91.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 91.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 90.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 89.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 88.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 88.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 87.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 87.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 86.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 85.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 85.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 85.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 84.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 84.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 84.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 84.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 84.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 83.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 82.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 81.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 81.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 80.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 79.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 79.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 79.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 77.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 77.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 77.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 77.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 76.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 76.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 75.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 75.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 75.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 75.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 73.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 72.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 72.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 72.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 72.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 72.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 71.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 71.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 71.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 71.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 71.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 71.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 71.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 70.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 70.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 70.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 69.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 68.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 68.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 68.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 67.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 67.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 67.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 67.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 66.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 66.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 65.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 65.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 65.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 64.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 64.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 64.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 64.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 63.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 63.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 62.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 62.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 61.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 61.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 60.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 60.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 60.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 59.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 58.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 58.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 58.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 58.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 57.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 57.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 57.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 57.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 57.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 56.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 55.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 54.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 54.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 54.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 53.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 53.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 53.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 53.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 53.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 52.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 52.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 52.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 52.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 52.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 51.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 50.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 50.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 50.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 50.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 49.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 47.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 47.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 47.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 47.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 46.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 45.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 44.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 44.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 43.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 43.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 41.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 41.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 41.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 41.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 41.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 38.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 38.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 38.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 37.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 37.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 36.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 36.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 35.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 35.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 35.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 34.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 34.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 33.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 33.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 33.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 33.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 33.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 33.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 32.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 31.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 31.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 31.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 30.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 30.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 30.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 29.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 29.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 29.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 28.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 28.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 28.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 27.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 26.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 26.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 26.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 25.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 25.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 25.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 24.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 24.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 24.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 23.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 23.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 23.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 23.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 22.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 22.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 21.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 21.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 21.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 21.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 21.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 20.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 20.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 20.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 19.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 19.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 19.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 18.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 18.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 18.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 18.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 17.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 17.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 17.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 16.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 16.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 16.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 16.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 16.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 16.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 15.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 14.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 14.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 13.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 12.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 85.9
Samples: 246

Max nTPM: 196.3
Min nTPM: 16.9
Std nTPM: 36.3
Median nTPM: 91.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 196.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 177.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 172.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 170.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 165.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 163.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 156.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 153.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 151.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 149.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 149.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 147.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 144.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 143.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 142.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 139.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 139.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 138.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 137.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 135.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 135.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 134.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 132.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 131.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 131.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 130.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 130.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 130.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 126.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 126.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 125.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 124.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 124.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 122.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 122.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 122.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 122.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 120.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 120.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 119.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 119.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 118.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 118.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 117.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 117.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 117.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 116.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 116.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 115.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 115.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 114.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 114.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 113.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 112.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 111.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 111.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 111.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 110.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 110.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 110.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 109.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 109.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 109.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 109.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 108.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 108.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 108.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 107.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 106.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 106.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 105.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 105.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 105.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 105.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 104.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 104.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 103.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 103.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 103.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 103.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 102.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 101.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 101.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 101.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 101.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 101.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 101.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 100.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 100.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 100.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 100.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 99.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 99.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 99.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 99.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 98.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 98.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 97.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 97.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 97.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 97.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 97.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 97.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 96.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 96.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 95.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 95.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 95.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 94.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 94.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 94.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 94.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 94.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 94.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 94.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 93.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 93.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 93.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 93.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 93.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 92.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 91.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 91.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 90.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 90.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 90.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 90.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 89.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 88.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 88.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 87.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 86.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 85.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 83.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 83.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 83.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 83.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 82.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 82.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 81.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 81.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 80.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 80.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 80.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 79.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 79.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 79.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 78.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 78.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 78.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 78.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 77.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 77.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 77.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 77.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 76.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 76.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 74.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 73.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 73.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 72.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 71.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 71.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 71.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 71.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 69.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 68.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 68.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 68.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 67.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 67.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 66.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 65.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 64.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 63.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 63.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 62.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 62.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 61.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 61.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 60.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 60.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 59.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 58.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 58.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 58.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 58.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 57.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 55.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 55.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 53.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 52.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 51.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 51.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 51.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 50.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 49.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 48.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 48.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 48.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 48.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 46.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 45.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 44.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 43.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 42.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 41.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 41.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 40.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 40.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 40.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 39.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 39.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 38.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 36.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 35.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 35.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 35.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 34.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 33.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 31.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 31.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 30.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 30.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 30.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 29.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 28.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 28.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 28.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 28.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 27.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 27.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 27.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 26.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 26.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 26.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 24.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 24.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 23.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 23.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 23.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 22.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 20.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 20.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 19.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 16.9
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Brain - Putamen (basal ganglia)
Average nTPM: 61.6
Samples: 205

Max nTPM: 138.8
Min nTPM: 12.0
Std nTPM: 31.8
Median nTPM: 58.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 138.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 132.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 132.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 131.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 128.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 127.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 125.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 124.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 123.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 122.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 118.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 117.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 113.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 113.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 112.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 111.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 109.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 107.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 107.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 107.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 107.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 105.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 105.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 104.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 103.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 103.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 103.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 102.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 101.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 99.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 98.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 98.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 98.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 97.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 96.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 95.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 94.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 94.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 94.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 94.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 94.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 94.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 93.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 93.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 91.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 91.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 89.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 89.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 89.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 88.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 86.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 85.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 84.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 84.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 82.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 81.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 81.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 81.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 81.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 80.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 79.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 78.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 78.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 77.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 76.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 75.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 75.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 73.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 73.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 73.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 73.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 73.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 73.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 73.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 72.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 71.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 71.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 71.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 70.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 70.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 70.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 69.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 66.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 65.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 65.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 64.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 64.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 64.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 63.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 63.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 63.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 62.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 61.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 61.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 61.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 61.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 61.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 60.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 60.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 59.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 59.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 58.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 58.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 57.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 57.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 57.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 56.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 56.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 54.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 54.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 54.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 53.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 53.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 53.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 53.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 52.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 52.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 51.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 50.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 49.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 49.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 49.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 48.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 48.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 47.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 46.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 46.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 45.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 45.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 45.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 45.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 45.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 44.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 44.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 44.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 43.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 42.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 42.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 42.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 41.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 41.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 41.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 39.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 38.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 38.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 38.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 38.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 38.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 38.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 38.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 37.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 34.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 34.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 34.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 33.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 33.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 33.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 33.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 33.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 32.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 31.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 30.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 29.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 29.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 28.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 28.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 27.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 26.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 26.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 25.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 25.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 25.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 25.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 25.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 25.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 25.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 25.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 24.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 24.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 24.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 23.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 23.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 23.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 22.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 22.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 22.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 22.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 20.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 19.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 19.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 18.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 17.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 17.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 17.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 17.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 17.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 16.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 16.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 14.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 14.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 13.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 13.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 12.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 12.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 12.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

106.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 51.3
FF:10164-103B2 76 years, female 51.3
Nucleus accumbens
Scaled Tags Per Million: 106.2
FF:10037-101F1 23-56 years, mixed 106.2
Putamen
Scaled Tags Per Million: 91.1
FF:10176-103C5 60 years, female 91.1
Globus pallidus
Scaled Tags Per Million: 31.7
FF:10175-103C4 60 years, female 42.3
FF:10161-103A8 76 years, female 21.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.8
Pig sample Sample description nTPM
Caudate
nTPM: 58.5
Samples: 4

Max nTPM: 71.8
Min nTPM: 43.0
Sample A Female 43.0
Sample B Female 59.9
Sample C Male 71.8
Sample D Male 59.3
Putamen
nTPM: 54.9
Samples: 4

Max nTPM: 78.3
Min nTPM: 39.4
Sample A Female 39.4
Sample B Female 45.3
Sample C Male 78.3
Sample D Male 56.7
Septum
nTPM: 63.8
Samples: 4

Max nTPM: 110.5
Min nTPM: 42.2
Sample A Female 51.8
Sample B Female 50.7
Sample C Male 110.5
Sample D Male 42.2
Ventral pallidum
nTPM: 60.8
Samples: 4

Max nTPM: 105.2
Min nTPM: 40.4
Sample A Female 51.3
Sample B Female 46.1
Sample C Male 105.2
Sample D Male 40.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

346.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 212.2
Samples: 4

Max nTPM: 222.0
Min nTPM: 199.2
Sample A Male 199.2
Sample B Male 215.7
Sample C Female 211.7
Sample D Female 222.0
Septum
nTPM: 346.7
Samples: 4

Max nTPM: 370.2
Min nTPM: 317.2
Sample A Male 370.2
Sample B Male 331.4
Sample C Female 368.0
Sample D Female 317.2
Ventral forebrain
nTPM: 318.2
Samples: 4

Max nTPM: 336.0
Min nTPM: 304.2
Sample A Male 304.2
Sample B Male 307.7
Sample C Female 336.0
Sample D Female 324.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

13.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.7
146 Antisense, RP_040315_01_11, Mouse strain C57BL/6J (56 days, male) 8.7
145 Antisense, RP_040315_01_11, Mouse strain C57BL/6J (56 days, male) 7.2
Pallidum
Expression energy: 13.3
146 Antisense, RP_040315_01_11, Mouse strain C57BL/6J (56 days, male) 13.3
145 Antisense, RP_040315_01_11, Mouse strain C57BL/6J (56 days, male) 12.9

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