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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: High
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: High
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Medium
Molecular layer cells - cytoplasm/membrane: High
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: High
Purkinje cells - cytoplasm/membrane: High
Purkinje cells - dendrites: High
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:71.4 nTPM
HPA Brain:97.1 nTPM
GTEx:71.4 nTPM
FANTOM5:61.4 Scaled Tags Per Million
Pig:59.4 nTPM
Mouse:356.5 nTPM
Allen mouse:11.5 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA025735Antibody HPA025762
Bergmann glia - cytoplasm/membrane Not detected-
Bergmann glia - nucleus Not detected-
GLUC cells - cytoplasm/membrane High-
GLUC cells - nucleus Not detected-
Purkinje cells -High
Purkinje cells - cytoplasm/membrane High-
Purkinje cells - dendrites High-
Purkinje cells - nucleus Not detected-
Cells in granular layer -High
Cells in molecular layer -Medium
Granular cells - cytoplasm/membrane High-
Granular cells - nucleus Not detected-
Molecular layer - neuropil Medium-
Molecular layer cells - cytoplasm/membrane High-
Molecular layer cells - nucleus Not detected-
Processes in granular layer Not detected-
Processes in molecular layer Not detected-
Processes in white matter High-
Synaptic glomeruli - capsule Not detected-
Synaptic glomeruli - core Not detected-
White matter cells - cytoplasm/membrane Not detected-
White matter cells - nucleus Not detected-





CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.1
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 53.8
2101 Male, age 74, right hemisphere 103.5
2006 Male, age 61, right hemisphere 75.9
1768 Female, age 72, unknown 60.5
2055 Female, age 91, right hemisphere 51.9
1788 Male, age 55, unknown 40.0
1774 Male, age 80, left hemisphere 39.6
1769 Male, age 76, right hemisphere 31.7
2003 Female, age 85, right hemisphere 27.1
Cerebellar nuclei
nTPM: 97.1
2783 Female, age 72, unknown 158.9
2177 Female, age 85, both hemispheres 132.3
2882 Male, age 76, left hemisphere 110.5
1966 Female, age 91, left hemisphere 104.9
1879 Male, age 55, unknown 91.5
2175 Male, age 61, right hemisphere 73.9
2005 Male, age 80, left hemisphere 72.6
2318 Male, age 74, left hemisphere 64.7
1871 Male, age 74, unknown 64.3
Flocculonodular lobe
nTPM: 43.3
2004 Male, age 61, right hemisphere 58.9
2176 Female, age 91, right hemisphere 53.3
1792 Male, age 74, unknown 51.0
1771 Male, age 80, left hemisphere 41.3
1835 Female, age 85, right hemisphere 38.7
1765 Male, age 55, unknown 33.0
1767 Male, age 76, left hemisphere 27.0
Vermis
nTPM: 47.4
1751 Male, age 74, right hemisphere 74.3
1928 Female, age 72, unknown 61.8
2834 Male, age 80, left hemisphere 54.0
1778 Female, age 91, left hemisphere 51.5
1766 Male, age 55, unknown 41.4
1825 Male, age 74, unknown 39.9
1988 Female, age 85, left hemisphere 38.7
2460 Male, age 61, both hemispheres 32.7
1770 Male, age 76, left hemisphere 32.4

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.4
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 67.5
Samples: 215

Max nTPM: 124.5
Min nTPM: 27.9
Std nTPM: 18.1
Median nTPM: 65.8
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 124.5
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 124.2
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 116.4
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 113.2
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 112.4
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 111.9
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 102.9
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 101.2
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 100.8
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 99.9
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 99.6
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 98.6
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 97.9
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 97.0
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 95.7
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 95.3
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 94.9
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 94.5
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 92.2
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 91.7
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 89.9
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 89.9
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 89.6
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 88.4
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 88.3
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 88.3
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 88.0
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 87.8
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 87.4
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 86.9
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 86.7
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 86.5
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 86.1
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 85.8
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 85.7
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 85.4
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 85.3
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 85.0
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 84.0
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 83.7
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 83.3
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 82.8
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 82.7
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 82.4
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 82.3
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 82.1
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 81.5
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 81.3
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 81.2
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 80.9
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 80.8
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 80.2
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 79.5
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 79.1
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 79.0
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 78.7
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 77.8
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 77.6
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 77.4
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 76.5
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 76.5
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 76.2
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 75.8
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 75.2
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 74.9
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 74.9
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 74.9
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 74.5
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 74.2
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 74.1
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 73.6
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 73.5
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 73.4
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 73.4
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 73.3
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 73.2
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 72.5
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 72.2
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 71.6
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 70.9
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 70.8
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 70.7
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 70.7
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 70.5
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 70.1
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 70.0
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 70.0
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 69.9
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 69.7
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 69.3
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 68.9
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 68.8
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 68.5
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 68.3
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 67.9
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 67.8
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 67.6
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 67.3
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 67.3
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 67.1
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 67.1
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 66.8
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 66.7
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 66.6
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 66.1
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 65.8
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 65.8
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 65.8
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 65.7
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 65.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 65.3
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 65.3
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 65.1
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 64.6
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 64.3
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 63.9
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 63.9
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 63.8
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 63.8
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 63.6
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 63.5
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 63.5
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 63.5
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 63.5
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 63.0
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 62.9
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 62.8
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 62.7
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 62.7
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 62.0
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 61.9
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 61.1
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 61.1
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 61.0
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 60.7
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 60.6
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 60.5
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 60.5
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 60.3
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 60.3
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 60.1
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 60.0
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 60.0
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 59.9
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 59.5
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 59.4
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 59.4
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 59.1
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 59.0
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 58.8
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 58.4
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 58.4
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 58.3
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 58.0
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 58.0
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 58.0
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 57.5
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 57.4
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 57.0
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 56.5
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 56.3
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 56.1
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 55.9
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 55.6
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 55.5
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 55.2
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 54.6
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 54.5
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 54.0
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 53.8
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 53.7
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 52.9
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 52.6
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 52.6
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 52.5
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 52.2
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 51.5
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 51.5
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 51.2
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 51.0
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 50.6
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 50.5
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 50.4
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 50.1
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 49.5
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 49.3
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 48.6
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 48.3
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 48.2
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 47.0
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 46.6
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 46.5
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 45.7
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 45.1
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 44.8
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 44.3
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 43.7
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 43.1
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 42.9
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 42.5
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 42.3
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 42.0
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 41.4
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 40.2
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 39.7
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 35.1
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 34.3
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 34.2
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 32.5
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 31.6
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 31.5
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 31.1
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 30.0
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 28.1
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 27.9
Show allShow less
Brain - Cerebellum
Average nTPM: 71.4
Samples: 241

Max nTPM: 126.0
Min nTPM: 32.2
Std nTPM: 15.1
Median nTPM: 72.1
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 126.0
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 119.5
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 109.8
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 103.0
GTEX-12126-0926-SM-5FQTW 20-29 years, male 100.2
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 98.2
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 97.9
GTEX-WL46-2826-SM-3LK81 50-59 years, male 97.6
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 97.2
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 96.7
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 96.5
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 96.4
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 95.7
GTEX-13112-2926-SM-5DUWT 50-59 years, male 95.6
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 95.6
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 94.3
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 94.3
GTEX-1192X-3226-SM-5987D 50-59 years, male 92.1
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 91.2
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 91.1
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 90.9
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 90.4
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 89.7
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 89.7
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 88.9
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 88.3
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 88.3
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 88.2
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 87.9
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 87.5
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 87.5
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 86.5
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 86.2
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 86.0
GTEX-14E6D-2926-SM-664OP 50-59 years, male 85.8
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 85.8
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 85.4
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 85.4
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 84.2
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 84.0
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 83.9
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 83.9
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 83.6
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 83.2
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 82.9
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 82.9
GTEX-17EVP-2926-SM-793BU 40-49 years, male 82.8
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 82.8
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 82.7
GTEX-15G19-2826-SM-6M48K 60-69 years, male 82.7
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 82.6
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 82.6
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 82.5
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 82.4
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 82.3
GTEX-17HII-2926-SM-79OMK 50-59 years, male 82.2
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 81.9
GTEX-18465-2926-SM-7KFSE 50-59 years, male 81.9
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 81.9
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 81.8
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 81.7
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 81.6
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 81.1
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 81.0
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 80.7
GTEX-11ONC-3026-SM-5985W 60-69 years, male 80.6
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 80.6
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 80.6
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 80.5
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 80.2
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 79.7
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 79.6
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 79.5
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 79.3
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 79.3
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 78.8
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 78.7
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 78.6
GTEX-1B933-3026-SM-731DB 50-59 years, female 78.4
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 78.4
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 78.2
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 77.8
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 77.8
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 77.8
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 77.6
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 77.5
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 77.5
GTEX-11NUK-3026-SM-5986K 50-59 years, male 77.4
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 77.4
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 77.4
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 77.3
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 77.2
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 76.7
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 76.5
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 76.4
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 76.3
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 76.3
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 76.2
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 76.0
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 76.0
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 75.9
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 75.7
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 75.4
GTEX-X261-3126-SM-4PQZC 50-59 years, male 75.4
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 75.1
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 74.9
GTEX-144GL-2926-SM-5O99F 50-59 years, male 74.7
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 74.6
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 74.3
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 74.2
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 74.1
GTEX-14ABY-3026-SM-664NE 50-59 years, male 73.9
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 73.6
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 73.4
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 73.1
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 72.9
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 72.7
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 72.6
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 72.6
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 72.4
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 72.1
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 71.5
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 71.3
GTEX-11EI6-2926-SM-5985U 60-69 years, male 71.2
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 71.2
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 70.9
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 70.9
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 70.8
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 70.4
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 69.9
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 69.8
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 69.7
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 69.6
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 69.6
GTEX-145LS-3026-SM-5O99S 60-69 years, female 68.9
GTEX-14PN4-3026-SM-664O4 50-59 years, male 68.6
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 68.3
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 68.3
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 68.2
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 68.2
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 68.0
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 68.0
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 67.9
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 67.8
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 67.8
GTEX-11DYG-2926-SM-5H132 60-69 years, male 67.4
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 67.3
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 67.2
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 67.1
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 66.2
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 66.2
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 66.1
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 66.0
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 65.8
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 65.8
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 65.8
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 65.5
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 65.4
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 65.4
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 65.3
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 65.3
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 65.2
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 65.1
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 64.8
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 64.5
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 64.4
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 64.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 64.1
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 63.7
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 63.2
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 63.1
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 63.0
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 62.9
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 62.9
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 62.9
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 62.7
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 62.6
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 62.4
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 62.2
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 62.2
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 62.0
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 61.8
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 61.8
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 61.7
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 61.7
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 61.2
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 60.9
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 60.9
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 60.8
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 60.6
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 60.4
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 60.3
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 60.0
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 59.7
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 59.1
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 58.7
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 58.3
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 58.3
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 58.1
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 58.0
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 57.7
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 57.5
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 57.4
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 56.3
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 56.1
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 55.7
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 54.8
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 54.8
GTEX-RU72-2926-SM-2TF66 50-59 years, female 54.7
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 54.6
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 54.5
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 54.3
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 54.0
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 53.4
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 52.6
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 52.1
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 51.9
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 51.1
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 51.1
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 50.3
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 50.1
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 49.8
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 49.8
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 47.5
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 46.5
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 46.2
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 45.1
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 45.0
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 43.7
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 43.1
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 42.0
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 41.9
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 41.4
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 40.8
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 40.7
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 40.7
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 38.9
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 38.6
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 38.3
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 35.6
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 32.2
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

61.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 61.4
FF:10083-102B2 22-68 years, mixed 85.2
FF:10166-103B4 76 years, female 37.7

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.4
Pig sample Sample description nTPM
Cerebellum
nTPM: 59.4
Samples: 4

Max nTPM: 96.5
Min nTPM: 38.9
Sample A Female 96.5
Sample B Female 52.6
Sample C Male 38.9
Sample D Male 49.4

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

356.5
Mouse sample Sample description nTPM
Cerebellum
nTPM: 356.5
Samples: 4

Max nTPM: 360.5
Min nTPM: 348.8
Sample A Male 357.8
Sample B Male 348.8
Sample C Female 360.5
Sample D Female 358.7

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.5
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 11.5
146 Antisense, RP_040315_01_11, Mouse strain C57BL/6J (56 days, male) 11.5
145 Antisense, RP_040315_01_11, Mouse strain C57BL/6J (56 days, male) 8.7

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