PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:254.7 nTPM
FANTOM5:213.9 Scaled Tags Per Million
Pig:126.8 nTPM
Mouse:409.4 nTPM
Allen mouse:14.9 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 254.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 82.0
1984 Male, age 76, both hemispheres 106.1
2301 Female, age 85, both hemispheres 77.3
2090 Male, age 80, both hemispheres 75.0
2188 Female, age 91, both hemispheres 69.8
Area postrema
nTPM: 42.7
2054 Male, age 76, both hemispheres 83.8
2306 Male, age 80, both hemispheres 28.4
2799 Male, age 61, both hemispheres 16.0
Dorsal cochlear nucleus
nTPM: 87.0
2058 Male, age 76, both hemispheres 110.4
2802 Male, age 74, right hemisphere 91.3
2187 Female, age 91, both hemispheres 87.2
2370 Male, age 61, both hemispheres 81.7
2378 Male, age 80, both hemispheres 64.3
Dorsal medullary reticular nucleus
nTPM: 123.3
2040 Female, age 85, both hemispheres 193.1
2373 Male, age 61, both hemispheres 89.8
2088 Male, age 76, both hemispheres 86.9
Dorsal motor vagal complex
nTPM: 97.5
2133 Female, age 91, both hemispheres 203.4
2844 Male, age 55, unknown 135.1
2000 Male, age 74, unknown 132.8
2813 Female, age 72, unknown 92.7
2185 Male, age 76, both hemispheres 60.6
2643 Male, age 74, both hemispheres 56.5
2807 Female, age 85, both hemispheres 52.2
2797 Male, age 61, both hemispheres 46.9
Dorsal tegmental nucleus
nTPM: 92.2
2083 Male, age 80, both hemispheres 115.5
1936 Male, age 76, left hemisphere 95.6
2358 Male, age 61, both hemispheres 79.5
2326 Male, age 74, both hemispheres 78.3
Dorsolateral tegmental area
nTPM: 91.8
2141 Male, age 76, both hemispheres 110.8
2751 Female, age 85, both hemispheres 109.3
2654 Male, age 80, both hemispheres 106.0
2360 Male, age 74, both hemispheres 85.5
2337 Male, age 61, both hemispheres 47.3
Gigantocellular reticular nuclei, medullary
nTPM: 113.7
2462 Male, age 74, both hemispheres 223.2
1876 Female, age 85, both hemispheres 114.3
2310 Male, age 80, both hemispheres 102.6
2022 Male, age 76, right hemisphere 94.6
2387 Female, age 91, both hemispheres 75.8
2314 Male, age 61, both hemispheres 71.4
Gigantocellular reticular nuclei, pars
nTPM: 121.3
2168 Male, age 76, both hemispheres 175.4
2084 Female, age 85, both hemispheres 146.8
2336 Male, age 61, both hemispheres 128.8
2706 Male, age 80, both hemispheres 78.6
2330 Male, age 80, both hemispheres 77.0
Inferior olive
nTPM: 61.1
2085 Female, age 85, both hemispheres 100.6
2563 Male, age 74, both hemispheres 61.6
2628 Female, age 91, both hemispheres 55.2
2178 Male, age 61, both hemispheres 45.6
2379 Male, age 80, both hemispheres 42.6
Kolliker-Fuse nucleus
nTPM: 98.4
2163 Male, age 80, both hemispheres 160.5
2793 Female, age 91, left hemisphere 72.7
2315 Male, age 76, right hemisphere 61.9
Lateral lemniscal nuclei
nTPM: 142.3
2453 Male, age 74, right hemisphere 186.5
2169 Male, age 76, both hemispheres 174.5
2746 Female, age 85, left hemisphere 144.6
2036 Male, age 80, both hemispheres 129.1
2320 Female, age 91, left hemisphere 77.1
Lateral medullary reticular nucleus
nTPM: 97.9
2044 Male, age 76, both hemispheres 168.5
2305 Male, age 74, both hemispheres 95.7
2804 Female, age 91, both hemispheres 94.7
2190 Female, age 85, both hemispheres 94.2
2374 Male, age 61, both hemispheres 73.2
2852 Male, age 80, both hemispheres 61.1
Lateral parabrachial nucleus
nTPM: 102.2
2139 Female, age 85, right hemisphere 161.9
2790 Male, age 61, both hemispheres 107.9
2013 Male, age 80, both hemispheres 95.4
2792 Male, age 76, both hemispheres 43.7
Lateral vestibular nucleus
nTPM: 112.1
2184 Male, age 76, both hemispheres 144.7
2311 Male, age 80, both hemispheres 79.5
Locus coeruleus
nTPM: 254.7
2720 Male, age 74, both hemispheres 408.7
2123 Female, age 91, both hemispheres 388.7
1980 Male, age 76, both hemispheres 250.0
2014 Male, age 55, unknown 234.3
2317 Female, age 72, unknown 178.1
2162 Male, age 80, both hemispheres 171.0
2788 Male, age 74, unknown 151.8
Medial olivary nucleus
nTPM: 41.5
2851 Male, age 80, both hemispheres 53.2
1962 Male, age 76, both hemispheres 52.5
2138 Female, age 91, both hemispheres 34.8
1943 Male, age 61, both hemispheres 25.7
Medial parabrachial nucleus
nTPM: 106.9
2156 Male, age 61, both hemispheres 123.8
2170 Female, age 91, both hemispheres 113.4
2854 Male, age 80, both hemispheres 103.8
2786 Male, age 76, both hemispheres 99.8
2463 Female, age 85, right hemisphere 93.8
Medial periolivary nuclei
nTPM: 133.7
2171 Female, age 85, both hemispheres 212.1
2063 Male, age 76, both hemispheres 195.1
2791 Male, age 74, right hemisphere 114.2
2081 Male, age 80, both hemispheres 77.4
2458 Female, age 91, both hemispheres 69.6
Medial vestibular nucleus
nTPM: 145.0
2134 Male, age 76, both hemispheres 183.7
2801 Male, age 74, both hemispheres 160.4
2743 Female, age 85, both hemispheres 156.5
2093 Male, age 80, both hemispheres 126.7
2624 Male, age 61, both hemispheres 124.3
2803 Female, age 91, both hemispheres 118.4
Motor facial nucleus
nTPM: 129.4
2062 Male, age 76, both hemispheres 208.5
2365 Male, age 74, right hemisphere 148.9
2327 Male, age 80, both hemispheres 115.0
2697 Female, age 85, both hemispheres 113.2
2126 Male, age 61, both hemispheres 109.6
2795 Female, age 91, both hemispheres 81.5
Motor hypoglossal nucleus
nTPM: 135.3
2125 Female, age 91, both hemispheres 170.5
2461 Male, age 61, both hemispheres 150.8
2132 Female, age 85, both hemispheres 149.2
2182 Male, age 80, both hemispheres 105.5
2277 Male, age 76, both hemispheres 100.3
Motor trigeminal nucleus
nTPM: 109.3
2079 Male, age 80, both hemispheres 129.4
2560 Male, age 74, both hemispheres 128.7
2335 Male, age 61, both hemispheres 113.8
2309 Male, age 76, both hemispheres 99.6
2321 Female, age 91, both hemispheres 74.8
Nuclei of the trapezoid body
nTPM: 166.0
2159 Male, age 61, both hemispheres 239.9
2735 Female, age 85, both hemispheres 214.7
1983 Male, age 76, both hemispheres 193.3
2166 Male, age 80, both hemispheres 111.6
2368 Female, age 91, both hemispheres 70.7
Nucleus ambiguus
nTPM: 125.5
2096 Female, age 85, both hemispheres 193.0
2071 Male, age 76, both hemispheres 57.9
Nucleus cuneatus
nTPM: 73.1
2131 Male, age 76, both hemispheres 148.1
2100 Male, age 76, both hemispheres 97.9
2562 Male, age 61, both hemispheres 90.3
2564 Male, age 74, both hemispheres 84.9
2376 Male, age 61, both hemispheres 79.4
2381 Male, age 80, both hemispheres 53.3
2808 Female, age 85, both hemispheres 37.7
2805 Female, age 91, both hemispheres 35.1
2380 Male, age 80, both hemispheres 31.7
Nucleus gracilis
nTPM: 41.6
2627 Male, age 74, both hemispheres 60.6
2382 Male, age 80, both hemispheres 36.5
2299 Female, age 85, both hemispheres 27.6
Nucleus raphe magnus
nTPM: 179.4
2160 Male, age 61, both hemispheres 290.5
2455 Male, age 74, both hemispheres 227.3
2172 Female, age 85, both hemispheres 225.5
2051 Male, age 76, both hemispheres 135.3
2328 Male, age 80, both hemispheres 112.4
2459 Female, age 91, both hemispheres 85.5
Nucleus raphe obscurus
nTPM: 74.5
2800 Male, age 61, midline 103.8
2845 Female, age 85, midline 88.5
2142 Male, age 76, midline 31.2
Nucleus raphe pallidus
nTPM: 90.4
2183 Male, age 80, midline 152.5
1924 Male, age 61, midline 79.8
2145 Male, age 76, midline 38.9
Nucleus tractus solitarii
nTPM: 104.4
2144 Female, age 91, right hemisphere 125.0
2656 Male, age 76, both hemispheres 109.6
2307 Male, age 80, both hemispheres 94.4
2191 Female, age 85, both hemispheres 88.5
Paramedian reticular nucleus
nTPM: 157.2
2313 Male, age 61, both hemispheres 196.2
2050 Female, age 85, both hemispheres 180.8
2057 Male, age 80, both hemispheres 166.8
2052 Male, age 76, both hemispheres 85.2
Parvicellular reticular nuclei
nTPM: 134.1
2558 Male, age 74, both hemispheres 151.2
2119 Male, age 80, both hemispheres 136.8
2095 Male, age 76, both hemispheres 114.2
Parvicellular reticular nuclei, medullary
nTPM: 143.6
2189 Female, age 91, both hemispheres 176.2
2091 Female, age 85, both hemispheres 151.6
2181 Male, age 80, left hemisphere 102.9
Pedunculopontine tegmental nucleus
nTPM: 110.2
2334 Male, age 80, both hemispheres 130.4
1921 Female, age 85, both hemispheres 119.7
2338 Male, age 61, both hemispheres 80.4
Peritrigeminal nucleus
nTPM: 132.0
2179 Male, age 61, both hemispheres 143.0
2136 Male, age 76, both hemispheres 128.3
2067 Female, age 85, both hemispheres 124.8
Pontine nuclei
nTPM: 170.4
2727 Male, age 61, right hemisphere 256.4
2787 Female, age 85, both hemispheres 254.5
1863 Male, age 55, unknown 189.1
2109 Female, age 72, unknown 180.0
1968 Male, age 76, left hemisphere 172.1
2454 Male, age 74, left hemisphere 143.6
2115 Male, age 80, left hemisphere 98.5
2319 Female, age 91, both hemispheres 69.0
Pontine raphe nucleus
nTPM: 155.4
2122 Female, age 85, midline 183.4
2853 Male, age 76, midline 127.3
Posteroventral cochlear nucleus
nTPM: 82.1
2752 Female, age 85, both hemispheres 153.3
2070 Male, age 76, both hemispheres 118.4
2371 Male, age 61, both hemispheres 67.3
2341 Male, age 80, both hemispheres 46.7
2135 Female, age 91, both hemispheres 24.8
Prepositus hypoglossal nucleus
nTPM: 117.9
2855 Female, age 85, right hemisphere 127.9
2086 Male, age 80, both hemispheres 108.0
Principal sensory trigeminal nucleus
nTPM: 148.1
2158 Male, age 61, both hemispheres 251.1
2008 Male, age 80, left hemisphere 151.6
2324 Male, age 76, both hemispheres 122.3
2367 Female, age 91, left hemisphere 67.1
Reticular pontine nucleus, caudal
nTPM: 106.7
2092 Male, age 76, both hemispheres 133.8
2332 Male, age 80, right hemisphere 132.6
2559 Male, age 74, both hemispheres 90.5
2457 Female, age 91, both hemispheres 70.1
Reticular pontine nucleus, oral
nTPM: 118.6
2361 Male, age 74, both hemispheres 156.5
2012 Female, age 85, both hemispheres 154.1
1939 Male, age 80, both hemispheres 117.1
2167 Male, age 76, both hemispheres 105.7
2366 Female, age 91, both hemispheres 59.5
Reticulotegmental nucleus
nTPM: 117.6
2325 Male, age 76, both hemispheres 142.3
2452 Male, age 74, both hemispheres 136.5
2333 Male, age 80, both hemispheres 101.0
2322 Female, age 91, both hemispheres 90.6
Spinal trigeminal nucleus, caudal
nTPM: 114.9
2390 Female, age 91, both hemispheres 208.3
2447 Male, age 76, both hemispheres 139.8
2642 Male, age 74, both hemispheres 81.2
2308 Male, age 80, both hemispheres 78.5
2312 Male, age 61, both hemispheres 66.8
Spinal trigeminal nucleus, interpolar
nTPM: 168.1
2625 Male, age 61, both hemispheres 243.0
2066 Male, age 76, right hemisphere 230.0
2033 Male, age 80, both hemispheres 132.7
2389 Female, age 91, both hemispheres 125.0
2386 Female, age 85, both hemispheres 109.5
Spinal trigeminal nucleus, oral
nTPM: 125.6
2737 Female, age 85, both hemispheres 143.8
2164 Male, age 80, both hemispheres 134.6
1978 Male, age 76, both hemispheres 98.4
Spinal vestibular nucleus
nTPM: 114.1
2186 Female, age 91, both hemispheres 151.9
2780 Male, age 80, both hemispheres 138.2
2748 Male, age 76, both hemispheres 117.0
2796 Male, age 61, both hemispheres 103.9
2806 Female, age 85, both hemispheres 102.5
2384 Male, age 74, both hemispheres 71.3
Subcoeruleus area
nTPM: 123.8
2323 Female, age 91, left hemisphere 168.3
2089 Male, age 76, left hemisphere 128.4
1958 Male, age 80, both hemispheres 126.2
2451 Male, age 74, both hemispheres 117.5
2369 Female, age 85, left hemisphere 78.7
Superior olive
nTPM: 126.0
1875 Female, age 85, both hemispheres 183.2
2364 Male, age 74, right hemisphere 130.0
2020 Male, age 76, both hemispheres 124.2
2329 Male, age 80, right hemisphere 104.4
2561 Female, age 91, both hemispheres 88.3
Superior vestibular nucleus
nTPM: 87.2
2015 Male, age 80, both hemispheres 100.6
2061 Male, age 76, both hemispheres 97.9
2383 Male, age 74, both hemispheres 63.1
Ventral medullary reticular nucleus
nTPM: 102.3
2060 Male, age 76, both hemispheres 117.8
2372 Male, age 61, both hemispheres 86.9
Ventral periolivary nuclei
nTPM: 135.5
2130 Female, age 85, both hemispheres 187.7
2165 Male, age 80, both hemispheres 155.3
2023 Male, age 76, both hemispheres 105.4
2794 Female, age 91, left hemisphere 93.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 115.7
2741 Female, age 85, both hemispheres 156.1
1986 Male, age 76, both hemispheres 148.6
2180 Male, age 61, both hemispheres 116.3
2302 Female, age 91, both hemispheres 83.7
2118 Male, age 80, both hemispheres 73.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 121.3
2449 Male, age 74, both hemispheres 194.0
1959 Male, age 76, both hemispheres 134.1
2840 Female, age 85, both hemispheres 124.3
2359 Male, age 61, both hemispheres 113.2
2161 Male, age 80, both hemispheres 101.8
2456 Female, age 91, both hemispheres 60.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 213.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 89.2
FF:10182-103D2 60 years, female 108.6
FF:10165-103B3 76 years, female 69.9
Medulla oblongata
Scaled Tags Per Million: 59.9
FF:10038-101F2 18-64 years, mixed 104.6
FF:10155-103A2 76 years, female 39.2
FF:10174-103C3 60 years, female 35.9
Pons
Scaled Tags Per Million: 213.9
FF:10033-101E6 18-54 years, mixed 213.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 126.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 76.2
Samples: 4

Max nTPM: 102.3
Min nTPM: 47.1
Sample A Female 73.8
Sample B Female 81.4
Sample C Male 102.3
Sample D Male 47.1
Pons
nTPM: 126.8
Samples: 4

Max nTPM: 170.0
Min nTPM: 105.2
Sample A Female 170.0
Sample B Female 105.2
Sample C Male 119.9
Sample D Male 111.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 409.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 409.4
Samples: 4

Max nTPM: 436.2
Min nTPM: 376.7
Sample A Male 424.8
Sample B Male 376.7
Sample C Female 436.2
Sample D Female 399.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 14.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 14.0
146 Antisense, RP_040315_01_11, Mouse strain C57BL/6J (56 days, male) 14.0
145 Antisense, RP_040315_01_11, Mouse strain C57BL/6J (56 days, male) 13.3
Pons
Expression energy: 14.9
145 Antisense, RP_040315_01_11, Mouse strain C57BL/6J (56 days, male) 14.9
146 Antisense, RP_040315_01_11, Mouse strain C57BL/6J (56 days, male) 13.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org