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CYB5R3
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  • CYB5R3
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:155.0 nTPM
HPA Brain:154.7 nTPM
GTEx:155.0 nTPM
FANTOM5:170.2 Scaled Tags Per Million
Pig:69.3 nTPM
Mouse:72.0 nTPM
Allen mouse:2.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001566
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

154.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 112.5
1857 Female, age 85, left hemisphere 137.8
2290 Female, age 72, unknown 135.1
1854 Male, age 80, left hemisphere 115.1
2481 Female, age 94, left hemisphere 110.8
2846 Female, age 79, unknown 104.9
2288 Male, age 75, left hemisphere 102.3
1781 Male, age 74, unknown 98.3
2289 Male, age 61, right hemisphere 95.2
Globus pallidus, externus
nTPM: 154.7
2646 Male, age 61, right hemisphere 190.8
1996 Male, age 80, right hemisphere 179.4
2772 Female, age 79, unknown 147.6
2395 Male, age 75, both hemispheres 135.8
2567 Female, age 72, unknown 120.1
Globus pallidus, internus
nTPM: 143.6
2483 Female, age 94, right hemisphere 161.7
2037 Male, age 80, right hemisphere 153.3
2287 Male, age 75, right hemisphere 147.1
2566 Female, age 72, unknown 145.2
1818 Male, age 74, unknown 144.2
2111 Female, age 85, right hemisphere 138.7
2778 Female, age 91, both hemispheres 115.2
Nucleus accumbens
nTPM: 116.9
2698 Female, age 72, unknown 154.6
1806 Female, age 85, left hemisphere 130.0
2732 Male, age 80, right hemisphere 115.9
2824 Male, age 61, right hemisphere 111.1
1856 Female, age 91, right hemisphere 110.6
2286 Male, age 75, left hemisphere 105.9
2391 Female, age 94, left hemisphere 104.4
1783 Male, age 74, unknown 102.6
Nucleus basalis of Meynert
nTPM: 138.6
2569 Male, age 61, both hemispheres 222.3
2821 Male, age 75, both hemispheres 119.1
2484 Female, age 94, left hemisphere 106.8
2393 Male, age 80, right hemisphere 105.9
Nucleus of the diagonal band
nTPM: 115.7
2195 Female, age 85, both hemispheres 130.3
1812 Female, age 91, both hemispheres 128.7
2775 Male, age 80, right hemisphere 111.0
1979 Male, age 74, unknown 106.5
2029 Male, age 61, right hemisphere 101.8
Putamen
nTPM: 105.0
2482 Female, age 94, left hemisphere 121.7
2647 Male, age 75, left hemisphere 114.4
2489 Female, age 72, unknown 111.8
1838 Male, age 80, right hemisphere 104.7
1937 Female, age 91, right hemisphere 102.0
1829 Male, age 74, unknown 100.5
2466 Female, age 79, unknown 79.7
Septal nuclei
nTPM: 117.9
2394 Male, age 61, left hemisphere 142.7
1960 Male, age 74, unknown 129.4
2059 Female, age 85, both hemispheres 129.0
2199 Male, age 80, right hemisphere 112.5
2629 Female, age 94, right hemisphere 112.2
2031 Female, age 72, unknown 107.0
2009 Female, age 91, both hemispheres 92.5
Stria terminalis, bed nucleus
nTPM: 96.6
2201 Male, age 74, unknown 106.2
1974 Female, age 91, both hemispheres 102.5
2486 Female, age 94, both hemispheres 81.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

155.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 133.2
Samples: 246

Max nTPM: 468.0
Min nTPM: 45.3
Std nTPM: 45.4
Median nTPM: 126.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 468.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 323.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 281.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 261.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 256.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 239.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 238.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 224.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 222.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 213.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 212.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 211.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 207.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 206.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 204.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 203.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 202.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 197.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 197.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 193.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 191.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 190.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 187.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 187.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 186.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 185.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 185.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 183.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 181.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 177.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 177.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 177.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 176.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 172.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 172.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 171.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 170.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 169.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 167.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 166.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 165.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 165.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 165.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 165.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 165.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 164.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 163.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 162.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 162.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 161.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 159.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 158.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 158.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 157.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 157.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 157.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 156.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 155.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 155.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 155.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 154.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 153.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 153.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 153.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 152.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 152.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 152.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 150.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 149.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 149.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 148.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 148.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 147.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 147.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 147.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 146.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 145.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 143.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 143.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 143.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 142.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 142.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 142.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 141.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 141.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 140.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 140.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 139.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 139.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 139.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 138.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 137.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 137.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 136.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 136.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 136.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 136.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 135.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 134.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 133.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 132.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 131.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 131.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 130.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 130.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 129.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 129.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 128.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 128.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 128.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 128.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 128.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 128.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 128.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 127.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 127.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 127.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 127.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 126.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 126.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 126.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 126.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 126.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 125.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 125.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 124.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 124.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 123.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 123.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 123.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 122.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 121.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 121.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 119.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 119.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 117.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 116.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 116.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 116.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 116.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 116.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 115.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 115.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 114.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 114.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 114.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 113.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 113.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 112.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 112.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 112.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 112.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 112.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 111.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 111.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 111.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 111.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 111.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 110.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 110.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 109.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 109.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 109.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 108.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 108.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 108.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 107.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 107.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 107.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 107.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 107.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 106.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 106.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 105.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 105.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 104.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 104.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 104.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 104.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 103.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 103.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 103.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 102.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 102.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 102.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 101.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 101.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 100.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 100.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 100.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 100.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 99.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 99.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 99.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 99.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 99.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 99.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 99.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 98.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 97.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 97.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 97.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 97.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 96.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 96.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 96.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 96.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 96.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 95.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 95.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 95.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 95.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 95.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 95.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 92.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 92.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 92.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 92.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 92.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 92.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 92.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 91.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 91.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 91.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 91.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 90.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 90.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 89.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 88.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 84.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 84.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 84.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 84.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 83.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 82.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 82.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 81.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 80.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 79.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 78.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 76.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 76.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 74.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 70.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 65.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 45.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 155.0
Samples: 246

Max nTPM: 392.0
Min nTPM: 76.3
Std nTPM: 55.5
Median nTPM: 141.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 392.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 345.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 327.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 320.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 313.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 305.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 300.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 297.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 296.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 291.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 284.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 281.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 279.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 276.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 275.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 270.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 263.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 261.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 260.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 260.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 253.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 252.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 246.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 237.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 236.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 234.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 234.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 231.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 230.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 227.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 225.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 216.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 214.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 214.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 214.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 211.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 205.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 203.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 198.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 196.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 196.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 195.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 195.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 192.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 191.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 190.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 188.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 187.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 187.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 187.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 185.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 183.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 183.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 183.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 182.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 182.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 182.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 180.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 176.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 175.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 173.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 173.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 172.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 172.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 171.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 170.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 167.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 166.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 165.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 164.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 164.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 164.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 163.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 163.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 162.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 162.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 162.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 161.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 161.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 161.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 159.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 159.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 159.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 159.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 158.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 158.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 157.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 157.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 157.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 157.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 157.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 156.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 156.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 155.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 154.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 154.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 154.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 154.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 153.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 153.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 152.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 151.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 150.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 150.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 149.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 149.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 149.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 148.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 148.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 147.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 147.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 147.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 147.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 146.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 146.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 146.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 145.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 145.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 144.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 143.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 143.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 143.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 141.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 140.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 140.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 139.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 138.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 137.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 137.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 137.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 137.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 136.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 136.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 136.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 136.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 134.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 134.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 133.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 131.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 131.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 130.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 130.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 130.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 129.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 129.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 128.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 128.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 128.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 127.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 127.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 127.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 127.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 127.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 126.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 126.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 124.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 124.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 123.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 123.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 122.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 122.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 122.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 122.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 122.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 122.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 121.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 121.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 121.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 121.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 121.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 120.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 120.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 120.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 119.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 118.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 118.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 118.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 117.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 117.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 117.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 117.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 116.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 116.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 116.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 116.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 116.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 115.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 115.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 115.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 115.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 114.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 114.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 114.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 114.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 114.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 113.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 113.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 112.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 112.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 112.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 111.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 111.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 110.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 110.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 109.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 108.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 108.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 108.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 107.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 107.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 107.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 107.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 106.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 106.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 105.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 103.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 103.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 102.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 102.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 102.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 101.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 101.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 100.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 100.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 100.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 99.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 99.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 99.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 98.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 98.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 97.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 97.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 96.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 96.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 95.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 95.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 94.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 93.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 91.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 91.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 89.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 87.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 86.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 83.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 83.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 76.3
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Brain - Putamen (basal ganglia)
Average nTPM: 149.5
Samples: 205

Max nTPM: 392.8
Min nTPM: 73.0
Std nTPM: 51.6
Median nTPM: 136.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 392.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 372.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 304.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 303.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 288.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 272.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 267.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 256.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 255.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 248.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 246.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 241.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 233.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 232.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 230.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 227.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 226.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 222.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 220.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 217.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 217.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 216.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 215.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 214.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 210.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 209.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 205.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 204.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 204.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 203.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 202.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 200.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 198.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 198.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 196.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 193.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 192.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 191.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 190.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 188.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 188.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 187.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 185.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 184.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 184.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 183.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 181.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 179.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 178.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 173.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 172.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 171.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 170.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 169.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 167.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 165.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 164.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 163.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 162.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 162.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 161.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 160.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 158.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 158.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 158.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 158.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 157.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 157.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 156.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 154.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 153.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 153.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 151.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 150.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 150.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 149.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 149.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 149.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 149.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 149.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 148.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 147.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 146.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 146.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 146.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 146.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 145.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 145.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 143.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 143.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 142.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 141.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 141.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 141.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 140.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 140.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 140.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 140.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 139.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 137.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 137.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 136.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 136.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 136.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 136.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 136.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 136.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 135.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 135.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 135.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 135.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 135.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 134.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 134.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 133.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 133.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 132.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 132.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 130.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 130.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 130.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 129.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 129.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 129.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 129.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 129.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 129.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 128.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 128.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 128.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 127.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 127.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 126.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 126.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 123.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 123.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 122.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 122.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 122.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 121.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 121.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 119.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 118.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 118.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 117.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 117.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 116.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 116.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 115.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 115.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 114.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 114.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 113.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 113.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 112.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 111.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 111.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 111.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 110.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 110.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 110.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 109.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 109.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 109.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 109.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 106.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 106.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 106.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 105.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 105.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 105.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 104.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 102.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 102.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 102.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 101.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 101.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 100.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 100.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 100.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 99.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 99.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 99.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 99.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 98.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 97.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 97.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 95.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 95.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 93.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 93.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 91.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 91.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 91.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 90.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 90.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 88.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 87.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 85.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 82.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 80.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 75.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 74.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 73.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 73.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

170.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 161.5
FF:10164-103B2 76 years, female 161.5
Nucleus accumbens
Scaled Tags Per Million: 137.3
FF:10037-101F1 23-56 years, mixed 137.3
Putamen
Scaled Tags Per Million: 170.2
FF:10176-103C5 60 years, female 170.2
Globus pallidus
Scaled Tags Per Million: 144.0
FF:10161-103A8 76 years, female 174.2
FF:10175-103C4 60 years, female 113.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.3
Pig sample Sample description nTPM
Caudate
nTPM: 58.9
Samples: 4

Max nTPM: 74.1
Min nTPM: 45.8
Sample A Female 45.8
Sample B Female 74.1
Sample C Male 63.8
Sample D Male 52.0
Putamen
nTPM: 64.4
Samples: 4

Max nTPM: 73.0
Min nTPM: 53.4
Sample A Female 73.0
Sample B Female 53.4
Sample C Male 63.2
Sample D Male 67.9
Septum
nTPM: 69.3
Samples: 4

Max nTPM: 93.7
Min nTPM: 55.8
Sample A Female 66.3
Sample B Female 61.5
Sample C Male 93.7
Sample D Male 55.8
Ventral pallidum
nTPM: 67.9
Samples: 4

Max nTPM: 96.2
Min nTPM: 50.7
Sample A Female 50.7
Sample B Female 59.0
Sample C Male 96.2
Sample D Male 65.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 61.9
Samples: 4

Max nTPM: 65.2
Min nTPM: 56.7
Sample A Male 60.5
Sample B Male 65.2
Sample C Female 56.7
Sample D Female 65.1
Septum
nTPM: 72.0
Samples: 4

Max nTPM: 77.7
Min nTPM: 68.0
Sample A Male 68.0
Sample B Male 77.7
Sample C Female 69.5
Sample D Female 72.9
Ventral forebrain
nTPM: 62.7
Samples: 4

Max nTPM: 66.7
Min nTPM: 60.3
Sample A Male 61.5
Sample B Male 62.3
Sample C Female 66.7
Sample D Female 60.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.3
77620794 Antisense, RP_070129_03_G08, Mouse strain C57BL/6J (56 days, male) 2.3
Pallidum
Expression energy: 2.7
77620794 Antisense, RP_070129_03_G08, Mouse strain C57BL/6J (56 days, male) 2.7

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