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CYB5R3
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  • CYB5R3
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:133.2 nTPM
FANTOM5:161.5 Scaled Tags Per Million
Pig:58.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001566
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

133.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 133.2
Samples: 246

Max nTPM: 468.0
Min nTPM: 45.3
Std nTPM: 45.4
Median nTPM: 126.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 468.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 323.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 281.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 261.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 256.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 239.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 238.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 224.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 222.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 213.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 212.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 211.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 207.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 206.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 204.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 203.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 202.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 197.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 197.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 193.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 191.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 190.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 187.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 187.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 186.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 185.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 185.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 183.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 181.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 177.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 177.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 177.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 176.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 172.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 172.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 171.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 170.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 169.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 167.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 166.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 165.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 165.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 165.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 165.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 165.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 164.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 163.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 162.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 162.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 161.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 159.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 158.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 158.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 157.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 157.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 157.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 156.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 155.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 155.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 155.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 154.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 153.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 153.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 153.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 152.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 152.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 152.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 150.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 149.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 149.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 148.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 148.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 147.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 147.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 147.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 146.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 145.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 143.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 143.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 143.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 142.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 142.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 142.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 141.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 141.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 140.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 140.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 139.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 139.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 139.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 138.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 137.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 137.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 136.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 136.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 136.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 136.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 135.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 134.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 133.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 132.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 131.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 131.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 130.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 130.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 129.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 129.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 128.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 128.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 128.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 128.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 128.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 128.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 128.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 127.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 127.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 127.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 127.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 126.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 126.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 126.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 126.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 126.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 125.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 125.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 124.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 124.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 123.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 123.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 123.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 122.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 121.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 121.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 119.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 119.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 117.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 116.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 116.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 116.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 116.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 116.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 115.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 115.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 114.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 114.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 114.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 113.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 113.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 112.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 112.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 112.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 112.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 112.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 111.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 111.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 111.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 111.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 111.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 110.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 110.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 109.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 109.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 109.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 108.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 108.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 108.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 107.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 107.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 107.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 107.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 107.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 106.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 106.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 105.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 105.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 104.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 104.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 104.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 104.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 103.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 103.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 103.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 102.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 102.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 102.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 101.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 101.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 100.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 100.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 100.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 100.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 99.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 99.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 99.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 99.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 99.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 99.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 99.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 98.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 97.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 97.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 97.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 97.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 96.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 96.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 96.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 96.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 96.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 95.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 95.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 95.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 95.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 95.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 95.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 92.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 92.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 92.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 92.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 92.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 92.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 92.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 91.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 91.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 91.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 91.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 90.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 90.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 89.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 88.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 84.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 84.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 84.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 84.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 83.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 82.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 82.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 81.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 80.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 79.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 78.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 76.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 76.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 74.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 70.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 65.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 45.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

161.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 161.5
FF:10164-103B2 76 years, female 161.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.9
Pig sample Sample description nTPM
Caudate
nTPM: 58.9
Samples: 4

Max nTPM: 74.1
Min nTPM: 45.8
Sample A Female 45.8
Sample B Female 74.1
Sample C Male 63.8
Sample D Male 52.0

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