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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
2016.2
nTPM
FANTOM5:
2081.4
Scaled Tags Per Million
Pig:
2002.3
nTPM
Allen mouse:
19.2
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2016.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 1235.1
1984
Male, age 76, both hemispheres
1704.8
2301
Female, age 85, both hemispheres
1367.7
2090
Male, age 80, both hemispheres
1050.9
2188
Female, age 91, both hemispheres
817.1
Dorsal cochlear nucleus nTPM: 1696.9
2802
Male, age 74, right hemisphere
2043.2
2370
Male, age 61, both hemispheres
1997.2
2058
Male, age 76, both hemispheres
1715.8
2378
Male, age 80, both hemispheres
1506.2
2187
Female, age 91, both hemispheres
1222.3
Dorsal tegmental nucleus nTPM: 1659.2
1936
Male, age 76, left hemisphere
2058.2
2083
Male, age 80, both hemispheres
1698.6
2326
Male, age 74, both hemispheres
1636.6
2358
Male, age 61, both hemispheres
1243.6
Dorsolateral tegmental area nTPM: 1639.5
2360
Male, age 74, both hemispheres
1892.3
2654
Male, age 80, both hemispheres
1722.1
2141
Male, age 76, both hemispheres
1641.7
2337
Male, age 61, both hemispheres
1524.5
2751
Female, age 85, both hemispheres
1417.1
Kolliker-Fuse nucleus nTPM: 2016.2
2315
Male, age 76, right hemisphere
3918.2
2163
Male, age 80, both hemispheres
1429.4
2793
Female, age 91, left hemisphere
700.9
Lateral lemniscal nuclei nTPM: 955.6
2169
Male, age 76, both hemispheres
1381.0
2746
Female, age 85, left hemisphere
1140.9
2036
Male, age 80, both hemispheres
905.6
2320
Female, age 91, left hemisphere
680.4
2453
Male, age 74, right hemisphere
670.0
Lateral parabrachial nucleus nTPM: 1660.4
2792
Male, age 76, both hemispheres
2376.9
2139
Female, age 85, right hemisphere
1684.9
2013
Male, age 80, both hemispheres
1477.1
2790
Male, age 61, both hemispheres
1102.8
Lateral vestibular nucleus nTPM: 1851.7
2311
Male, age 80, both hemispheres
2010.7
2184
Male, age 76, both hemispheres
1692.6
Locus coeruleus nTPM: 1621.3
1980
Male, age 76, both hemispheres
2044.9
2123
Female, age 91, both hemispheres
1839.4
2317
Female, age 72, unknown
1651.5
2014
Male, age 55, unknown
1619.0
2788
Male, age 74, unknown
1565.2
2162
Male, age 80, both hemispheres
1413.6
2720
Male, age 74, both hemispheres
1215.6
Medial parabrachial nucleus nTPM: 1452.6
2156
Male, age 61, both hemispheres
1744.3
2786
Male, age 76, both hemispheres
1622.9
2463
Female, age 85, right hemisphere
1371.5
2170
Female, age 91, both hemispheres
1320.5
2854
Male, age 80, both hemispheres
1203.9
Medial periolivary nuclei nTPM: 933.4
2063
Male, age 76, both hemispheres
1403.4
2791
Male, age 74, right hemisphere
1082.3
2171
Female, age 85, both hemispheres
851.0
2081
Male, age 80, both hemispheres
729.1
2458
Female, age 91, both hemispheres
601.1
Motor facial nucleus nTPM: 979.3
2062
Male, age 76, both hemispheres
1512.7
2795
Female, age 91, both hemispheres
1129.4
2126
Male, age 61, both hemispheres
1080.4
2365
Male, age 74, right hemisphere
962.3
2697
Female, age 85, both hemispheres
639.4
2327
Male, age 80, both hemispheres
551.7
Motor trigeminal nucleus nTPM: 1121.6
2335
Male, age 61, both hemispheres
1697.7
2309
Male, age 76, both hemispheres
1661.6
2079
Male, age 80, both hemispheres
827.4
2560
Male, age 74, both hemispheres
764.7
2321
Female, age 91, both hemispheres
656.7
Nuclei of the trapezoid body nTPM: 1015.0
1983
Male, age 76, both hemispheres
1723.4
2166
Male, age 80, both hemispheres
863.8
2368
Female, age 91, both hemispheres
845.4
2735
Female, age 85, both hemispheres
833.2
2159
Male, age 61, both hemispheres
809.1
Nucleus raphe magnus nTPM: 942.1
2051
Male, age 76, both hemispheres
1730.2
2455
Male, age 74, both hemispheres
1210.2
2328
Male, age 80, both hemispheres
922.4
2160
Male, age 61, both hemispheres
737.2
2172
Female, age 85, both hemispheres
536.5
2459
Female, age 91, both hemispheres
516.3
Paramedian reticular nucleus nTPM: 1214.4
2052
Male, age 76, both hemispheres
1391.4
2057
Male, age 80, both hemispheres
1343.1
2313
Male, age 61, both hemispheres
1334.3
2050
Female, age 85, both hemispheres
788.8
Pedunculopontine tegmental nucleus nTPM: 1600.6
2334
Male, age 80, both hemispheres
1818.3
1921
Female, age 85, both hemispheres
1644.3
2338
Male, age 61, both hemispheres
1339.1
Pontine nuclei nTPM: 838.9
1968
Male, age 76, left hemisphere
1446.8
1863
Male, age 55, unknown
1083.3
2115
Male, age 80, left hemisphere
1007.1
2787
Female, age 85, both hemispheres
785.2
2109
Female, age 72, unknown
743.2
2319
Female, age 91, both hemispheres
737.3
2454
Male, age 74, left hemisphere
460.2
2727
Male, age 61, right hemisphere
448.4
Pontine raphe nucleus nTPM: 1172.5
2853
Male, age 76, midline
1554.7
2122
Female, age 85, midline
790.3
Posteroventral cochlear nucleus nTPM: 1455.3
2371
Male, age 61, both hemispheres
2275.5
2070
Male, age 76, both hemispheres
1808.3
2752
Female, age 85, both hemispheres
1223.7
2341
Male, age 80, both hemispheres
1206.3
2135
Female, age 91, both hemispheres
762.7
Principal sensory trigeminal nucleus nTPM: 1088.9
2324
Male, age 76, both hemispheres
2114.4
2158
Male, age 61, both hemispheres
939.7
2008
Male, age 80, left hemisphere
773.6
2367
Female, age 91, left hemisphere
528.0
Reticular pontine nucleus, caudal nTPM: 940.9
2092
Male, age 76, both hemispheres
1726.8
2457
Female, age 91, both hemispheres
709.5
2332
Male, age 80, right hemisphere
697.9
2559
Male, age 74, both hemispheres
629.5
Reticular pontine nucleus, oral nTPM: 1094.5
2167
Male, age 76, both hemispheres
1578.5
1939
Male, age 80, both hemispheres
1516.5
2012
Female, age 85, both hemispheres
1204.9
2366
Female, age 91, both hemispheres
770.9
2361
Male, age 74, both hemispheres
401.9
Reticulotegmental nucleus nTPM: 1256.2
2325
Male, age 76, both hemispheres
1483.1
2333
Male, age 80, both hemispheres
1361.4
2322
Female, age 91, both hemispheres
1207.0
2452
Male, age 74, both hemispheres
973.4
Spinal trigeminal nucleus, oral nTPM: 1497.9
1978
Male, age 76, both hemispheres
2107.3
2737
Female, age 85, both hemispheres
1336.2
2164
Male, age 80, both hemispheres
1050.2
Subcoeruleus area nTPM: 1410.0
2369
Female, age 85, left hemisphere
1513.7
2323
Female, age 91, left hemisphere
1512.7
2451
Male, age 74, both hemispheres
1499.5
2089
Male, age 76, left hemisphere
1281.8
1958
Male, age 80, both hemispheres
1242.2
Superior olive nTPM: 920.9
2020
Male, age 76, both hemispheres
1356.3
2364
Male, age 74, right hemisphere
1092.5
2329
Male, age 80, right hemisphere
789.1
2561
Female, age 91, both hemispheres
725.5
1875
Female, age 85, both hemispheres
641.0
Ventral periolivary nuclei nTPM: 915.6
2023
Male, age 76, both hemispheres
1246.7
2165
Male, age 80, both hemispheres
1014.2
2130
Female, age 85, both hemispheres
830.4
2794
Female, age 91, left hemisphere
571.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 1086.2
2359
Male, age 61, both hemispheres
1528.8
1959
Male, age 76, both hemispheres
1390.7
2840
Female, age 85, both hemispheres
1037.6
2161
Male, age 80, both hemispheres
917.7
2449
Male, age 74, both hemispheres
853.5
2456
Female, age 91, both hemispheres
789.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2002.3
Pig sample
Sample description
nTPM
Pons nTPM: 2002.3
Samples: 4
Max nTPM: 2591.2
Min nTPM: 1558.1
Sample A
Female
1691.7
Sample B
Female
1558.1
Sample C
Male
2591.2
Sample D
Male
2168.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
