We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CST3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • CST3
TISSUE PRIMARY DATA BREAST Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Breast
Tissue proteome
Breast
BREAST - Expression summary
Protein expression
Breasti

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Adipocytes: Not detected
Glandular cells: Low
Myoepithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:870.8 nTPM
HPA:366.9 nTPM
GTEx:870.8 nTPM
FANTOM5:1939.5 Scaled Tags Per Million

BREAST - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA013143Antibody CAB000118
Adipocytes Not detected-
Glandular cells MediumLow
Myoepithelial cells Not detectedNot detected



BREAST - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

366.9
overview
Female, age 52
Breast sample 373
nTPM: 482.8
Cell types%
Glandular cells:
15

Adipocytes:
5

Other cell types:
80

overview
Female, age 80
Breast sample 390
nTPM: 654.7
Cell types%
Glandular cells:
5

Adipocytes:
15

Other cell types:
80

overview
Female, age 47
Breast sample 405
nTPM: 261.2
Cell types%
Glandular cells:
5

Adipocytes:
5

Other cell types:
90

overview
Female, age 38
Breast sample 410
nTPM: 69
Cell types%
Glandular cells:
40

Adipocytes:
5

Other cell types:
55


BREAST - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

870.8
GTEx sample id Sample description nTPM
Breast - Mammary Tissue
Average nTPM: 870.8
Samples: 459

Max nTPM: 2754.4
Min nTPM: 219.4
Std nTPM: 370.4
Median nTPM: 824.1
GTEX-1AMEY-1026-SM-718AA 30-39 years, female 2754.4
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 2110.9
GTEX-1N2EF-2226-SM-E9J33 60-69 years, male 1996.0
GTEX-17MFQ-0926-SM-7LG4S 20-29 years, male 1951.5
GTEX-17F96-2426-SM-7IGLN 70-79 years, male 1940.1
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 1937.0
GTEX-1F5PK-2126-SM-7PC28 50-59 years, male 1905.5
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 1858.9
GTEX-14753-2426-SM-5LU8U 60-69 years, male 1840.7
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 1796.3
GTEX-1CAMR-1426-SM-793BO 20-29 years, male 1786.3
GTEX-1S82Z-0726-SM-E6CHX 30-39 years, female 1757.9
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 1724.9
GTEX-1JJEA-2726-SM-ARL8V 60-69 years, male 1720.9
GTEX-1I19N-2826-SM-CL55D 70-79 years, male 1676.8
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 1669.4
GTEX-1NHNU-0926-SM-E9J2T 50-59 years, male 1661.5
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 1629.1
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 1603.4
GTEX-1I6K6-0826-SM-ARL7Z 30-39 years, male 1601.2
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 1594.9
GTEX-R55D-0826-SM-48FEA 50-59 years, male 1594.8
GTEX-17KNJ-2026-SM-7LG53 50-59 years, male 1581.9
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 1581.3
GTEX-ZDTT-2126-SM-DKPOM 60-69 years, male 1559.3
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 1554.2
GTEX-1C6WA-2426-SM-7SB86 60-69 years, male 1543.1
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 1514.5
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 1512.7
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 1511.8
GTEX-17F97-2526-SM-7EWDV 50-59 years, male 1504.8
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 1493.1
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 1486.5
GTEX-1B8SG-1226-SM-7IGPF 50-59 years, male 1433.3
GTEX-169BO-1126-SM-7MGWN 50-59 years, male 1429.6
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 1410.6
GTEX-1JKYR-0926-SM-CMKGJ 20-29 years, male 1410.2
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 1409.0
GTEX-1QPFJ-2026-SM-EVYBE 30-39 years, female 1394.7
GTEX-13SLW-2526-SM-62LDQ 70-79 years, male 1387.2
GTEX-14B4R-1226-SM-5TDDT 30-39 years, male 1370.7
GTEX-1LG7Z-0726-SM-CXKYD 30-39 years, male 1368.8
GTEX-1LBAC-0926-SM-CXKY9 20-29 years, male 1356.0
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 1354.3
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 1353.8
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 1350.3
GTEX-1AX9I-0726-SM-73KWV 60-69 years, male 1349.2
GTEX-1R7EV-1526-SM-E8VOD 40-49 years, male 1346.1
GTEX-1M4P7-2626-SM-E9U5F 60-69 years, male 1345.8
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 1345.1
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 1336.9
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 1331.2
GTEX-11P82-1326-SM-5HL62 20-29 years, male 1316.4
GTEX-1I1GP-0426-SM-COH3N 50-59 years, male 1307.9
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 1303.9
GTEX-1MJK3-1126-SM-E9J3F 20-29 years, male 1293.5
GTEX-1GN2E-2226-SM-9WG6J 60-69 years, male 1287.7
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 1280.2
GTEX-X62O-0526-SM-EWRMA 50-59 years, male 1279.7
GTEX-15G19-2126-SM-6M48J 60-69 years, male 1276.8
GTEX-14PN4-0626-SM-62LFP 50-59 years, male 1268.5
GTEX-1122O-1226-SM-5H113 60-69 years, female 1260.9
GTEX-1HSEH-2026-SM-ADEHN 60-69 years, male 1260.8
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 1247.6
GTEX-1HFI7-0126-SM-CGQFQ 50-59 years, female 1241.6
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 1218.7
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 1218.1
GTEX-17EVQ-0426-SM-7LG57 70-79 years, male 1217.5
GTEX-1JJE9-2326-SM-ARL8Q 70-79 years, male 1216.2
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 1212.4
GTEX-17HHE-1426-SM-7EPH4 50-59 years, male 1210.4
GTEX-1IDJH-2226-SM-E6CJV 70-79 years, male 1208.0
GTEX-17GQL-0326-SM-7LG5U 60-69 years, male 1203.4
GTEX-1C64O-0726-SM-7DUFU 60-69 years, male 1202.3
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 1194.3
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 1193.6
GTEX-1KANC-1426-SM-CYPT9 50-59 years, female 1191.2
GTEX-1PDJ9-1126-SM-EXUSW 20-29 years, male 1186.5
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 1184.6
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 1183.1
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 1182.9
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 1181.6
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 1170.1
GTEX-18A6Q-0926-SM-7LG4N 60-69 years, male 1170.0
GTEX-1AX9J-1126-SM-731B7 60-69 years, male 1168.6
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 1164.0
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 1161.3
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 1157.3
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 1156.9
GTEX-17F98-0526-SM-79OK5 40-49 years, female 1156.5
GTEX-XBED-1626-SM-47JYN 60-69 years, male 1152.3
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 1143.6
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 1136.8
GTEX-16BQI-1026-SM-7KUEA 30-39 years, female 1130.0
GTEX-1H4P4-2226-SM-9MQKQ 50-59 years, male 1129.0
GTEX-11OF3-1926-SM-59889 60-69 years, male 1128.9
GTEX-1PPGY-1526-SM-EVYBK 60-69 years, male 1127.9
GTEX-1QP9N-1826-SM-E8VMP 30-39 years, male 1127.7
GTEX-14ICK-2426-SM-6EU27 40-49 years, male 1124.4
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 1121.5
GTEX-1EKGG-2626-SM-7IGPY 60-69 years, male 1119.5
GTEX-1F75I-2026-SM-7SB7N 40-49 years, male 1118.8
GTEX-1MCYP-0126-SM-E6CIS 20-29 years, female 1110.4
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 1110.0
GTEX-1BAJH-0826-SM-7EWEF 70-79 years, male 1105.0
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 1103.4
GTEX-ZLWG-1926-SM-DO92J 50-59 years, female 1099.7
GTEX-18D9A-1526-SM-7LG4J 30-39 years, female 1098.2
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 1095.5
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 1094.9
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 1092.4
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 1092.4
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 1091.9
GTEX-145MF-2226-SM-7EPIR 50-59 years, male 1091.4
GTEX-1ICLY-1726-SM-B2LVT 50-59 years, male 1087.9
GTEX-1R9JW-0326-SM-EAZ45 30-39 years, female 1086.3
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 1085.8
GTEX-1JKYN-0726-SM-ARZMY 30-39 years, male 1080.4
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 1079.4
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 1079.0
GTEX-ZLV1-1426-SM-DO92Z 60-69 years, female 1076.0
GTEX-1N2EE-2126-SM-E8VNN 60-69 years, male 1074.8
GTEX-16YQH-2826-SM-6PAMY 30-39 years, male 1073.5
GTEX-1KANA-2026-SM-DIPFB 20-29 years, male 1073.5
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 1072.1
GTEX-1HR98-0426-SM-COH36 60-69 years, male 1065.5
GTEX-14DAR-1326-SM-7DUEG 50-59 years, male 1065.0
GTEX-1PPH7-0826-SM-E8VNX 40-49 years, male 1064.6
GTEX-1IOXB-1926-SM-ARL8E 50-59 years, male 1061.6
GTEX-1KAFJ-0226-SM-DIPEL 50-59 years, male 1057.4
GTEX-1I1GV-2426-SM-CGQFM 60-69 years, male 1056.7
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 1056.1
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 1052.5
GTEX-14E7W-0826-SM-62LEJ 70-79 years, male 1049.9
GTEX-14PKU-0426-SM-6EU1P 40-49 years, female 1048.3
GTEX-1QMI2-0726-SM-E9J4F 60-69 years, male 1046.8
GTEX-1H1DG-0526-SM-9YFLN 70-79 years, male 1045.7
GTEX-1CB4J-1826-SM-7EWF9 60-69 years, male 1041.8
GTEX-YECK-0726-SM-EZ6LV 60-69 years, male 1040.0
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 1036.1
GTEX-14PJ4-2126-SM-6ETZJ 60-69 years, male 1031.4
GTEX-1HUB1-1626-SM-CM2SL 60-69 years, male 1023.0
GTEX-14BMV-0626-SM-793AU 50-59 years, male 1022.7
GTEX-1HC8U-0826-SM-ADEIL 40-49 years, female 1021.0
GTEX-1J8QM-2026-SM-ARZMW 60-69 years, female 1020.6
GTEX-1IGQW-0926-SM-ADEH6 60-69 years, male 1015.6
GTEX-1IDJF-2326-SM-ARL86 20-29 years, male 1004.5
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 1004.3
GTEX-1HCUA-0726-SM-ACKVU 50-59 years, female 1002.6
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 1001.1
GTEX-1OKEX-0826-SM-E9J2B 60-69 years, male 994.7
GTEX-1H1ZS-0126-SM-9YFKQ 70-79 years, male 994.0
GTEX-S341-1526-SM-4AD6K 40-49 years, female 983.8
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 983.8
GTEX-1GF9V-2526-SM-7SB8K 60-69 years, male 982.5
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 977.7
GTEX-Z9EW-1526-SM-EZ6LU 40-49 years, male 977.3
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 975.8
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 972.8
GTEX-117YX-1426-SM-5H12H 50-59 years, male 968.0
GTEX-1JMQK-2626-SM-COH2W 60-69 years, male 967.5
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 966.2
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 965.5
GTEX-1QP29-1726-SM-E8VMQ 50-59 years, male 959.8
GTEX-V955-2026-SM-3GAFA 60-69 years, male 951.2
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 951.2
GTEX-1HT8W-2226-SM-CGQEC 30-39 years, male 946.9
GTEX-1JMLX-2026-SM-CMKGN 50-59 years, male 946.4
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 946.3
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 943.9
GTEX-ZLFU-2126-SM-DO931 40-49 years, male 941.1
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 938.1
GTEX-1JMPZ-1626-SM-COH31 30-39 years, male 938.0
GTEX-1H11D-1526-SM-9MQJY 40-49 years, male 935.6
GTEX-1N5O9-1126-SM-DTXEQ 60-69 years, male 930.7
GTEX-1R9PN-0326-SM-DTX85 40-49 years, female 929.4
GTEX-1EWIQ-1726-SM-7SB7T 70-79 years, female 922.9
GTEX-11EI6-0626-SM-5985T 60-69 years, male 922.3
GTEX-18A7B-2626-SM-7LG55 70-79 years, male 920.7
GTEX-1QEPI-0926-SM-DTXF3 60-69 years, female 916.7
GTEX-1A3MV-1626-SM-731C1 30-39 years, male 915.9
GTEX-1NV8Z-2826-SM-E8VME 60-69 years, male 914.6
GTEX-1I6K7-1026-SM-A9SLK 40-49 years, male 914.3
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 911.1
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 910.3
GTEX-1GPI7-0926-SM-7PC3J 20-29 years, male 909.5
GTEX-17F9E-2526-SM-7MGW2 50-59 years, male 907.4
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 905.6
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 898.9
GTEX-17HGU-1326-SM-79OKB 50-59 years, male 895.6
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 893.1
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 891.8
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 890.5
GTEX-1IDJU-1826-SM-CMKHV 60-69 years, female 885.5
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 884.8
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 880.6
GTEX-1LSVX-2426-SM-E6CJX 60-69 years, male 879.6
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 877.3
GTEX-1LSNL-2826-SM-E9U5L 50-59 years, male 872.5
GTEX-1ICLZ-0426-SM-B2LW2 60-69 years, male 871.2
GTEX-1HCU7-1026-SM-ADEIP 50-59 years, male 870.3
GTEX-1QCLY-1626-SM-DTXDW 30-39 years, male 869.1
GTEX-1RAZQ-1226-SM-EWRNL 30-39 years, male 868.7
GTEX-1QCLZ-2326-SM-DTXDO 60-69 years, female 868.3
GTEX-18QFQ-0826-SM-718AX 30-39 years, male 866.2
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 860.9
GTEX-1AX8Z-0926-SM-731AW 60-69 years, male 858.6
GTEX-1KD5A-1926-SM-DKPQA 50-59 years, male 855.1
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 854.0
GTEX-1GPI6-0626-SM-7RHHJ 60-69 years, male 853.8
GTEX-1GMRU-0826-SM-9WYT7 50-59 years, male 852.6
GTEX-QVJO-1826-SM-447C9 60-69 years, female 850.3
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 849.9
GTEX-17EUY-1926-SM-7DUF6 20-29 years, male 848.1
GTEX-1HCU9-0326-SM-9WYSC 20-29 years, male 848.0
GTEX-1E2YA-2726-SM-7IGPW 50-59 years, male 847.9
GTEX-1ICG6-1326-SM-ACKWR 70-79 years, female 846.9
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 842.7
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 842.7
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 840.3
GTEX-WFON-1826-SM-3GILG 40-49 years, male 838.9
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 838.4
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 834.6
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 831.5
GTEX-1B933-2526-SM-7IGO5 50-59 years, female 830.0
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 828.5
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 827.9
GTEX-1RAZS-1226-SM-E8VMT 50-59 years, male 826.3
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 825.5
GTEX-17JCI-0726-SM-7EPH1 60-69 years, female 824.1
GTEX-1MA7X-1626-SM-E9U5B 60-69 years, male 821.5
GTEX-1K2DA-1726-SM-CGQGS 50-59 years, male 820.7
GTEX-17HHY-0926-SM-793C1 50-59 years, male 819.2
GTEX-1IDFM-0426-SM-B2LVV 60-69 years, male 816.5
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 812.5
GTEX-1B97I-0426-SM-79OL7 40-49 years, male 811.2
GTEX-1S82U-1126-SM-E9U6I 30-39 years, female 809.0
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 807.9
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 805.2
GTEX-17HG3-0126-SM-7IGNH 30-39 years, female 804.4
GTEX-1EN7A-1426-SM-7PBY4 40-49 years, male 801.9
GTEX-1GF9U-1726-SM-7MGY5 40-49 years, female 800.9
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 800.4
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 798.8
GTEX-1A8G7-2426-SM-731AK 60-69 years, male 796.5
GTEX-1R46S-2526-SM-E8VN2 60-69 years, female 792.1
GTEX-1R7EU-1226-SM-E8VMR 60-69 years, male 791.2
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 790.7
GTEX-1MJK2-2226-SM-EVYCR 50-59 years, male 788.9
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 787.8
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 786.9
GTEX-1R9PM-1826-SM-EVYBH 20-29 years, male 786.6
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 785.4
GTEX-1C6VS-0726-SM-7EPHF 60-69 years, male 784.6
GTEX-1LSNM-1326-SM-E9TJ1 50-59 years, male 783.3
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 782.9
GTEX-QMRM-1626-SM-D4P1U 50-59 years, male 781.1
GTEX-1JN1M-3026-SM-CMKGK 60-69 years, female 776.2
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 775.4
GTEX-117XS-1926-SM-5GICO 60-69 years, male 771.8
GTEX-18465-2026-SM-718AP 50-59 years, male 771.5
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 771.2
GTEX-1QP28-1226-SM-E9J2M 50-59 years, female 770.5
GTEX-1I1HK-2426-SM-ADEHX 60-69 years, male 769.7
GTEX-1EU9M-2826-SM-7EWFH 60-69 years, male 768.8
GTEX-13VXU-2826-SM-664MA 50-59 years, male 767.4
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 764.8
GTEX-1CB4G-2326-SM-79OOI 60-69 years, male 763.5
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 760.2
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 755.7
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 753.1
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 747.8
GTEX-13113-5013-SM-7SB7G 60-69 years, female 745.2
GTEX-183FY-1126-SM-7DHLJ 20-29 years, male 744.9
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 744.4
GTEX-1QW4Y-1026-SM-DTXE2 30-39 years, male 743.4
GTEX-1HCVE-2626-SM-ADEJ8 50-59 years, male 742.8
GTEX-1C475-1226-SM-7SB72 40-49 years, female 735.9
GTEX-1RQEC-2026-SM-DTXDM 60-69 years, male 731.9
GTEX-13QJ3-0826-SM-7DHKK 50-59 years, male 729.2
GTEX-14PHY-1926-SM-5YY95 60-69 years, female 724.7
GTEX-15UF7-0726-SM-6M46D 40-49 years, male 724.5
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 721.5
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 720.3
GTEX-1F75B-0626-SM-7SB8A 50-59 years, male 719.1
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 715.5
GTEX-ZGAY-1726-SM-DO91P 40-49 years, female 714.6
GTEX-1H3VY-0926-SM-ACKXE 50-59 years, male 711.7
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 706.8
GTEX-18A7A-0726-SM-7LTAI 50-59 years, female 705.7
GTEX-1C6VQ-0426-SM-79OOX 50-59 years, male 699.1
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 699.0
GTEX-WHSB-1926-SM-EXOHH 50-59 years, male 698.7
GTEX-1IDJE-0826-SM-CKZNZ 50-59 years, female 694.6
GTEX-1MCC2-2126-SM-EWRON 30-39 years, female 694.6
GTEX-1J8Q3-1326-SM-CMKI1 60-69 years, male 690.3
GTEX-1GZHY-0726-SM-9WG6B 50-59 years, female 689.5
GTEX-1F6I4-2526-SM-7SB8F 60-69 years, male 688.0
GTEX-14PJO-0726-SM-69LO8 60-69 years, male 687.7
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 687.4
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 686.2
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 685.8
GTEX-1B97J-0426-SM-79OLQ 50-59 years, female 685.3
GTEX-17EVP-0226-SM-79OND 40-49 years, male 684.3
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 681.3
GTEX-1KXAM-1026-SM-CY8IA 60-69 years, male 676.0
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 674.1
GTEX-11GSP-0926-SM-9WYSG 60-69 years, female 671.6
GTEX-14E6C-1326-SM-62LEQ 40-49 years, male 665.6
GTEX-15FZZ-0726-SM-7KUFZ 30-39 years, female 663.6
GTEX-144GM-0926-SM-5O994 20-29 years, male 663.5
GTEX-1JN6P-2426-SM-ARL99 60-69 years, male 663.1
GTEX-1KD4Q-2326-SM-D4P3M 40-49 years, male 662.7
GTEX-1GZ4I-2826-SM-9MQK5 50-59 years, male 661.3
GTEX-13PVR-2226-SM-7DHKP 60-69 years, female 661.2
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 659.9
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 659.2
GTEX-1F75A-1826-SM-7SB8G 50-59 years, male 659.1
GTEX-1IE54-0626-SM-ARL8D 40-49 years, female 657.4
GTEX-X261-0626-SM-3NMD9 50-59 years, male 653.5
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 653.3
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 651.9
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 649.6
GTEX-17MF6-0326-SM-7EPH5 40-49 years, male 647.7
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 645.7
GTEX-1JMPY-0526-SM-CL54O 30-39 years, male 641.0
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 638.1
GTEX-R53T-1526-SM-48FEK 50-59 years, female 637.0
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 634.0
GTEX-1MA7W-1026-SM-DKPQK 20-29 years, female 632.5
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 632.0
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 630.4
GTEX-T6MN-0726-SM-32PML 50-59 years, male 628.4
GTEX-1I1GT-1126-SM-ARL7J 60-69 years, female 626.4
GTEX-1L5NE-2126-SM-CY8IH 50-59 years, male 625.2
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 625.0
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 623.6
GTEX-18A66-1726-SM-7LG5N 60-69 years, male 622.1
GTEX-1RLM8-2226-SM-EVYD1 50-59 years, male 619.7
GTEX-1B8KE-1226-SM-73KWK 50-59 years, male 617.5
GTEX-1B8KZ-1526-SM-7DUG7 50-59 years, male 613.8
GTEX-WFG8-2026-SM-EXOHO 20-29 years, male 612.7
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 612.5
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 610.5
GTEX-1CB4E-0226-SM-79OLW 60-69 years, male 608.7
GTEX-1JK1U-1826-SM-ARL8W 60-69 years, male 607.3
GTEX-1JMOU-2026-SM-CMKGU 60-69 years, female 606.2
GTEX-1GMR3-2626-SM-7RHHG 40-49 years, male 600.6
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 597.0
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 595.6
GTEX-1GN1W-1926-SM-7P8TH 50-59 years, female 594.2
GTEX-1I1GU-1026-SM-ADEHJ 40-49 years, male 592.2
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 588.2
GTEX-1HBPM-0126-SM-ARL9E 60-69 years, female 586.6
GTEX-1B8L1-2426-SM-9WYTE 60-69 years, male 583.4
GTEX-1192X-2326-SM-5987X 50-59 years, male 581.6
GTEX-1GF9X-1026-SM-ACKX2 40-49 years, female 580.1
GTEX-1IY9M-2726-SM-CMKG5 60-69 years, male 579.9
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 577.1
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 575.9
GTEX-1HCU8-0126-SM-ADEHH 60-69 years, female 575.8
GTEX-ZF3C-2326-SM-5S2NC 50-59 years, female 574.4
GTEX-1J8Q2-2726-SM-A9G2X 60-69 years, male 574.1
GTEX-1GZ4H-0326-SM-7P8QX 50-59 years, female 572.9
GTEX-1HSMO-0826-SM-ADEIV 60-69 years, male 572.7
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 570.0
GTEX-16NGA-0826-SM-718AF 40-49 years, female 564.7
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 560.5
GTEX-15ETS-0626-SM-7KUMX 40-49 years, female 559.9
GTEX-15UF6-0126-SM-6PAMB 70-79 years, female 557.8
GTEX-RU1J-0626-SM-4WAWY 20-29 years, female 556.4
GTEX-14BMU-1626-SM-5TDE7 20-29 years, female 552.0
GTEX-1IKJJ-2326-SM-COH3U 60-69 years, male 551.6
GTEX-14H4A-2526-SM-5YYAY 40-49 years, female 544.6
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 542.9
GTEX-1I4MK-1626-SM-CM2TJ 50-59 years, female 541.5
GTEX-REY6-2426-SM-48FF5 60-69 years, male 534.6
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 531.6
GTEX-15RJE-2626-SM-7KFT1 40-49 years, male 529.7
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 529.2
GTEX-1HSKV-2026-SM-CMKGX 60-69 years, male 525.7
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 524.3
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 523.2
GTEX-1LC47-1226-SM-D4P44 60-69 years, male 517.2
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 516.2
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 511.6
GTEX-1CAMS-1426-SM-7IGPM 40-49 years, female 505.5
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 503.7
GTEX-1GMR2-1926-SM-9MQLZ 50-59 years, male 502.2
GTEX-1HKZK-1826-SM-ADEJ2 40-49 years, male 502.0
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 498.4
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 494.4
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 494.1
GTEX-1A3MX-2726-SM-718B6 60-69 years, male 485.7
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 482.9
GTEX-15SHW-1326-SM-6PAL8 60-69 years, male 479.6
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 478.5
GTEX-1H1E6-0926-SM-9YFLT 30-39 years, male 478.4
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 473.7
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 467.7
GTEX-1IKOE-1326-SM-CE6T6 30-39 years, female 466.5
GTEX-QEL4-2126-SM-447AE 50-59 years, male 465.1
GTEX-RU72-0626-SM-46MUI 50-59 years, female 462.0
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 456.4
GTEX-1HBPN-2326-SM-9WPPU 50-59 years, male 456.4
GTEX-183WM-0726-SM-7LTAA 70-79 years, female 453.2
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 451.9
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 448.6
GTEX-1LNCM-0226-SM-DIPF4 50-59 years, female 446.4
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 444.9
GTEX-1H1CY-2226-SM-9WG7E 60-69 years, female 444.5
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 443.8
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 441.3
GTEX-1F5PL-1026-SM-7RHI1 40-49 years, female 441.0
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 436.2
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 434.5
GTEX-QEG5-0726-SM-D4P1T 20-29 years, male 430.4
GTEX-1H23P-0726-SM-9WG7K 60-69 years, male 429.0
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 419.1
GTEX-1M5QR-2526-SM-E9U5P 40-49 years, male 419.0
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 412.4
GTEX-11P81-1926-SM-5BC53 30-39 years, female 412.3
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 411.9
GTEX-1HR9M-2426-SM-ACKXI 60-69 years, male 407.7
GTEX-ZTPG-2826-SM-57WGA 20-29 years, female 399.2
GTEX-14LLW-0626-SM-62LFC 70-79 years, female 398.8
GTEX-TML8-1226-SM-32QON 40-49 years, female 397.9
GTEX-15EOM-5019-SM-793DK 20-29 years, female 395.6
GTEX-111YS-1926-SM-5GICC 60-69 years, male 390.5
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 385.7
GTEX-1LVAM-0926-SM-E9TJ2 50-59 years, female 371.9
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 364.7
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 358.6
GTEX-1K9T9-1426-SM-DIPFQ 50-59 years, female 355.1
GTEX-1NUQO-2226-SM-E9U68 20-29 years, female 350.8
GTEX-ZAK1-1326-SM-EVYAS 50-59 years, female 349.0
GTEX-14A5I-0726-SM-5TDEB 50-59 years, female 345.4
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 340.5
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 337.7
GTEX-1LVAN-1326-SM-CNPQE 50-59 years, female 336.8
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 332.2
GTEX-1IKOH-2326-SM-CM2TW 60-69 years, female 327.4
GTEX-1P4AB-1826-SM-E76PU 50-59 years, male 326.5
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 323.7
GTEX-1B932-0826-SM-73KXG 40-49 years, female 309.7
GTEX-13SLX-2326-SM-5ZZWE 50-59 years, female 303.3
GTEX-1LGRB-1826-SM-CNPQL 50-59 years, female 302.4
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 295.3
GTEX-1J8EW-2626-SM-CL53E 60-69 years, female 291.2
GTEX-1HSGN-1526-SM-A9SMO 40-49 years, female 290.4
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 286.4
GTEX-1GMR8-0726-SM-9KNVI 50-59 years, female 273.7
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 254.1
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 249.1
GTEX-1POEN-0926-SM-DTX88 30-39 years, female 237.6
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 236.3
GTEX-1GZ2Q-2626-SM-7MXV9 40-49 years, male 227.5
GTEX-1GN1U-0526-SM-9KNTT 50-59 years, female 219.5
GTEX-15ER7-1626-SM-6PAMZ 20-29 years, female 219.4
Show allShow less

BREAST - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1939.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Breast
Scaled Tags Per Million: 1939.5
FF:10080-102A8 77 years, female 1939.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org