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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:82.2 nTPM
HPA Brain:58.2 nTPM
GTEx:82.2 nTPM
FANTOM5:138.7 Scaled Tags Per Million
Pig:164.2 nTPM
Mouse:127.0 nTPM
Allen mouse:19.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051748Antibody HPA052661Antibody CAB016326
Glial cells HighHighHigh
Neuronal cells HighHighHigh







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 55.0
2288 Male, age 75, left hemisphere 66.0
1781 Male, age 74, unknown 62.0
2481 Female, age 94, left hemisphere 56.1
2846 Female, age 79, unknown 55.8
2290 Female, age 72, unknown 51.9
1857 Female, age 85, left hemisphere 50.6
1854 Male, age 80, left hemisphere 49.3
2289 Male, age 61, right hemisphere 48.5
Globus pallidus, externus
nTPM: 58.2
1996 Male, age 80, right hemisphere 66.6
2646 Male, age 61, right hemisphere 64.1
2772 Female, age 79, unknown 64.1
2395 Male, age 75, both hemispheres 54.9
2567 Female, age 72, unknown 41.2
Globus pallidus, internus
nTPM: 57.0
2287 Male, age 75, right hemisphere 72.9
2778 Female, age 91, both hemispheres 65.6
1818 Male, age 74, unknown 55.5
2111 Female, age 85, right hemisphere 55.1
2483 Female, age 94, right hemisphere 55.0
2037 Male, age 80, right hemisphere 53.4
2566 Female, age 72, unknown 41.5
Nucleus accumbens
nTPM: 55.9
2391 Female, age 94, left hemisphere 71.1
2698 Female, age 72, unknown 66.5
2286 Male, age 75, left hemisphere 59.0
1783 Male, age 74, unknown 54.0
1856 Female, age 91, right hemisphere 53.6
1806 Female, age 85, left hemisphere 53.4
2732 Male, age 80, right hemisphere 47.9
2824 Male, age 61, right hemisphere 41.7
Nucleus basalis of Meynert
nTPM: 52.8
2569 Male, age 61, both hemispheres 62.5
2821 Male, age 75, both hemispheres 56.0
2484 Female, age 94, left hemisphere 49.9
2393 Male, age 80, right hemisphere 42.9
Nucleus of the diagonal band
nTPM: 51.2
1812 Female, age 91, both hemispheres 58.0
2195 Female, age 85, both hemispheres 54.3
2775 Male, age 80, right hemisphere 52.2
1979 Male, age 74, unknown 51.4
2029 Male, age 61, right hemisphere 39.8
Putamen
nTPM: 49.9
2482 Female, age 94, left hemisphere 60.5
1838 Male, age 80, right hemisphere 52.8
2466 Female, age 79, unknown 49.7
1829 Male, age 74, unknown 48.8
1937 Female, age 91, right hemisphere 46.6
2647 Male, age 75, left hemisphere 46.4
2489 Female, age 72, unknown 44.3
Septal nuclei
nTPM: 51.2
1960 Male, age 74, unknown 54.7
2031 Female, age 72, unknown 52.6
2394 Male, age 61, left hemisphere 51.7
2009 Female, age 91, both hemispheres 51.2
2059 Female, age 85, both hemispheres 51.1
2199 Male, age 80, right hemisphere 49.2
2629 Female, age 94, right hemisphere 47.6
Stria terminalis, bed nucleus
nTPM: 46.5
1974 Female, age 91, both hemispheres 51.1
2201 Male, age 74, unknown 44.7
2486 Female, age 94, both hemispheres 43.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 80.3
Samples: 246

Max nTPM: 112.8
Min nTPM: 45.9
Std nTPM: 11.1
Median nTPM: 80.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 112.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 112.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 110.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 110.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 108.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 108.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 105.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 102.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 101.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 101.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 101.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 101.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 100.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 100.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 99.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 99.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 99.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 98.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 98.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 98.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 97.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 95.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 95.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 95.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 94.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 94.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 94.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 94.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 92.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 92.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 92.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 92.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 92.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 92.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 92.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 91.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 91.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 91.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 91.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 91.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 91.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 90.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 90.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 90.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 90.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 89.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 89.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 88.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 88.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 87.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 87.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 87.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 87.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 87.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 87.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 87.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 87.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 86.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 86.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 86.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 85.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 85.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 85.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 85.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 85.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 85.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 85.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 84.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 84.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 84.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 84.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 84.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 84.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 84.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 84.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 84.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 84.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 84.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 84.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 84.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 84.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 83.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 83.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 83.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 83.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 83.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 83.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 83.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 83.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 83.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 82.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 82.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 82.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 82.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 82.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 82.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 82.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 82.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 82.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 82.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 82.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 82.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 81.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 81.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 81.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 81.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 81.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 81.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 81.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 81.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 81.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 81.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 81.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 80.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 80.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 80.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 80.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 80.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 80.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 80.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 80.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 80.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 80.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 79.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 79.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 79.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 79.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 79.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 79.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 79.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 78.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 78.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 78.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 78.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 78.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 78.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 78.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 78.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 78.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 78.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 78.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 77.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 77.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 77.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 77.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 77.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 77.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 77.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 76.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 76.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 76.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 76.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 76.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 76.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 76.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 76.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 76.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 75.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 75.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 75.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 75.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 75.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 75.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 75.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 75.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 75.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 75.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 74.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 74.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 74.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 74.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 74.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 74.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 73.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 73.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 73.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 73.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 73.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 73.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 73.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 73.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 73.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 73.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 73.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 73.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 72.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 72.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 72.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 72.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 72.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 71.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 71.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 71.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 71.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 71.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 71.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 71.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 70.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 70.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 70.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 70.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 70.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 70.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 70.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 70.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 70.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 70.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 69.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 69.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 69.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 68.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 68.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 68.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 68.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 68.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 67.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 67.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 67.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 67.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 66.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 66.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 66.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 66.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 66.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 66.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 66.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 66.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 66.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 65.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 64.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 64.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 64.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 63.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 63.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 63.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 62.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 62.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 62.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 60.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 60.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 59.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 59.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 58.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 57.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 56.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 45.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 80.5
Samples: 246

Max nTPM: 134.6
Min nTPM: 49.1
Std nTPM: 11.9
Median nTPM: 79.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 134.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 115.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 115.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 109.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 108.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 107.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 106.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 105.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 105.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 103.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 102.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 102.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 100.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 100.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 99.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 98.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 98.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 98.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 98.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 97.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 96.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 96.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 96.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 95.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 94.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 94.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 94.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 94.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 94.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 93.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 93.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 93.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 93.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 92.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 92.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 91.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 91.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 91.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 91.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 91.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 91.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 91.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 91.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 91.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 90.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 90.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 90.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 90.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 89.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 89.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 89.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 89.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 89.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 89.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 88.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 88.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 88.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 88.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 88.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 87.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 87.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 87.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 87.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 87.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 86.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 86.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 86.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 86.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 86.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 86.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 86.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 85.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 85.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 85.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 85.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 85.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 85.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 84.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 84.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 84.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 84.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 84.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 83.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 83.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 83.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 83.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 83.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 83.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 83.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 83.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 83.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 83.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 83.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 82.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 82.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 82.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 82.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 82.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 82.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 82.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 82.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 82.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 81.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 81.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 81.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 81.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 81.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 81.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 81.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 80.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 80.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 80.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 80.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 80.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 80.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 80.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 80.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 80.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 79.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 79.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 79.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 79.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 79.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 79.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 79.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 79.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 79.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 79.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 78.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 78.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 78.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 78.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 78.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 78.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 78.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 78.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 78.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 77.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 77.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 77.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 77.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 77.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 77.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 77.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 76.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 76.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 76.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 76.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 76.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 76.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 76.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 75.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 75.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 75.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 75.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 75.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 75.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 75.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 75.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 75.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 75.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 75.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 75.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 75.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 74.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 74.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 74.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 74.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 74.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 74.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 74.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 74.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 74.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 74.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 74.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 73.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 73.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 73.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 73.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 73.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 73.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 73.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 73.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 73.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 73.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 72.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 72.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 72.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 72.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 72.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 72.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 72.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 72.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 72.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 72.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 71.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 71.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 71.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 71.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 71.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 71.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 71.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 71.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 70.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 70.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 70.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 70.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 70.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 70.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 70.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 69.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 69.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 69.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 69.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 69.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 69.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 69.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 68.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 67.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 67.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 66.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 66.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 66.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 65.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 65.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 65.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 65.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 65.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 64.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 64.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 64.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 64.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 64.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 63.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 62.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 62.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 59.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 59.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 59.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 57.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 55.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 54.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 53.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 52.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 51.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 49.1
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Brain - Putamen (basal ganglia)
Average nTPM: 82.2
Samples: 205

Max nTPM: 120.3
Min nTPM: 49.3
Std nTPM: 11.6
Median nTPM: 81.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 120.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 118.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 115.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 113.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 105.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 105.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 104.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 103.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 102.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 101.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 101.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 99.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 99.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 98.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 98.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 97.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 97.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 97.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 96.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 96.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 96.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 96.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 95.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 95.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 95.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 94.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 94.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 94.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 94.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 94.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 93.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 93.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 93.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 93.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 92.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 92.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 92.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 92.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 91.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 91.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 91.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 91.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 91.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 90.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 90.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 90.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 90.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 90.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 89.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 89.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 89.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 89.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 89.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 89.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 89.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 88.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 88.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 88.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 88.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 88.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 88.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 88.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 88.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 87.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 87.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 87.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 87.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 87.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 87.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 87.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 86.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 86.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 86.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 86.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 86.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 86.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 86.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 86.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 86.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 85.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 85.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 84.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 84.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 84.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 84.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 84.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 84.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 83.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 83.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 83.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 83.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 83.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 83.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 83.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 82.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 82.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 82.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 82.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 82.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 82.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 82.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 82.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 81.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 81.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 81.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 81.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 81.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 81.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 80.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 80.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 80.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 80.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 80.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 80.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 80.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 80.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 80.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 79.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 79.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 79.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 79.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 79.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 79.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 79.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 79.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 79.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 78.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 78.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 78.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 78.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 78.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 78.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 77.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 77.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 77.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 77.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 77.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 77.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 76.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 76.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 76.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 76.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 76.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 75.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 75.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 75.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 75.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 75.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 75.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 75.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 75.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 74.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 74.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 74.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 74.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 74.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 74.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 74.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 73.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 73.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 73.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 73.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 72.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 72.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 72.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 71.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 71.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 71.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 71.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 71.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 71.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 71.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 71.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 70.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 70.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 70.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 70.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 69.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 69.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 68.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 68.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 68.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 68.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 67.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 67.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 67.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 67.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 67.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 67.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 66.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 66.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 65.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 65.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 64.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 63.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 62.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 62.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 61.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 61.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 61.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 59.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 58.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 56.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 55.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 49.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

138.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 138.2
FF:10164-103B2 76 years, female 138.2
Nucleus accumbens
Scaled Tags Per Million: 126.1
FF:10037-101F1 23-56 years, mixed 126.1
Putamen
Scaled Tags Per Million: 138.7
FF:10176-103C5 60 years, female 138.7
Globus pallidus
Scaled Tags Per Million: 106.8
FF:10161-103A8 76 years, female 148.5
FF:10175-103C4 60 years, female 65.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

164.2
Pig sample Sample description nTPM
Caudate
nTPM: 154.6
Samples: 4

Max nTPM: 178.5
Min nTPM: 141.7
Sample A Female 141.7
Sample B Female 153.8
Sample C Male 178.5
Sample D Male 144.3
Putamen
nTPM: 164.2
Samples: 4

Max nTPM: 183.6
Min nTPM: 141.6
Sample A Female 163.0
Sample B Female 141.6
Sample C Male 183.6
Sample D Male 168.7
Septum
nTPM: 158.0
Samples: 4

Max nTPM: 170.1
Min nTPM: 146.9
Sample A Female 170.1
Sample B Female 146.9
Sample C Male 163.5
Sample D Male 151.5
Ventral pallidum
nTPM: 158.6
Samples: 4

Max nTPM: 168.4
Min nTPM: 144.4
Sample A Female 144.4
Sample B Female 168.4
Sample C Male 164.4
Sample D Male 157.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 125.6
Samples: 4

Max nTPM: 153.3
Min nTPM: 101.6
Sample A Male 153.3
Sample B Male 129.9
Sample C Female 117.5
Sample D Female 101.6
Septum
nTPM: 121.6
Samples: 4

Max nTPM: 132.0
Min nTPM: 114.4
Sample A Male 132.0
Sample B Male 118.4
Sample C Female 121.5
Sample D Female 114.4
Ventral forebrain
nTPM: 127.0
Samples: 4

Max nTPM: 135.0
Min nTPM: 114.7
Sample A Male 130.6
Sample B Male 135.0
Sample C Female 114.7
Sample D Female 127.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 19.7
532678 Antisense, RP_040825_01_D01, Mouse strain C57BL/6J (56 days, male) 19.7
Pallidum
Expression energy: 18.7
532678 Antisense, RP_040825_01_D01, Mouse strain C57BL/6J (56 days, male) 18.7

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