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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:938.1 nTPM
HPA Brain:395.3 nTPM
GTEx:938.1 nTPM
FANTOM5:280.0 Scaled Tags Per Million
Pig:0.0 nTPM
Mouse:95.2 nTPM
Allen mouse:8.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA064222
Glial cells Low
Neuronal cells High

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

395.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 310.9
2846 Female, age 79, unknown 382.6
1857 Female, age 85, left hemisphere 362.4
2290 Female, age 72, unknown 346.5
1854 Male, age 80, left hemisphere 339.1
1781 Male, age 74, unknown 323.5
2481 Female, age 94, left hemisphere 281.5
2288 Male, age 75, left hemisphere 237.9
2289 Male, age 61, right hemisphere 213.7
Globus pallidus, externus
nTPM: 395.3
1996 Male, age 80, right hemisphere 485.3
2772 Female, age 79, unknown 448.1
2646 Male, age 61, right hemisphere 374.1
2395 Male, age 75, both hemispheres 339.4
2567 Female, age 72, unknown 329.6
Globus pallidus, internus
nTPM: 388.6
2483 Female, age 94, right hemisphere 451.0
2037 Male, age 80, right hemisphere 439.6
2287 Male, age 75, right hemisphere 427.6
1818 Male, age 74, unknown 367.7
2778 Female, age 91, both hemispheres 363.8
2566 Female, age 72, unknown 358.5
2111 Female, age 85, right hemisphere 311.9
Nucleus accumbens
nTPM: 305.8
2698 Female, age 72, unknown 379.6
1806 Female, age 85, left hemisphere 342.0
1783 Male, age 74, unknown 341.4
1856 Female, age 91, right hemisphere 333.6
2391 Female, age 94, left hemisphere 301.6
2732 Male, age 80, right hemisphere 269.4
2286 Male, age 75, left hemisphere 254.0
2824 Male, age 61, right hemisphere 224.8
Nucleus basalis of Meynert
nTPM: 335.4
2569 Male, age 61, both hemispheres 409.2
2821 Male, age 75, both hemispheres 338.5
2484 Female, age 94, left hemisphere 320.1
2393 Male, age 80, right hemisphere 274.0
Nucleus of the diagonal band
nTPM: 221.8
1979 Male, age 74, unknown 270.9
1812 Female, age 91, both hemispheres 257.5
2775 Male, age 80, right hemisphere 207.9
2195 Female, age 85, both hemispheres 197.7
2029 Male, age 61, right hemisphere 174.9
Putamen
nTPM: 297.3
2647 Male, age 75, left hemisphere 314.0
2466 Female, age 79, unknown 313.9
2482 Female, age 94, left hemisphere 313.3
2489 Female, age 72, unknown 302.6
1937 Female, age 91, right hemisphere 299.6
1838 Male, age 80, right hemisphere 288.4
1829 Male, age 74, unknown 249.3
Septal nuclei
nTPM: 231.8
2199 Male, age 80, right hemisphere 291.4
2394 Male, age 61, left hemisphere 240.3
2031 Female, age 72, unknown 224.7
2629 Female, age 94, right hemisphere 222.8
1960 Male, age 74, unknown 221.8
2059 Female, age 85, both hemispheres 215.5
2009 Female, age 91, both hemispheres 206.1
Stria terminalis, bed nucleus
nTPM: 188.9
1974 Female, age 91, both hemispheres 217.4
2201 Male, age 74, unknown 195.1
2486 Female, age 94, both hemispheres 154.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

938.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 811.0
Samples: 246

Max nTPM: 1948.5
Min nTPM: 269.9
Std nTPM: 229.0
Median nTPM: 795.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1948.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1712.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1585.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1521.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1444.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1406.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1383.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1362.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1308.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1284.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1228.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1219.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1218.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1211.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1180.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1163.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1160.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1137.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1128.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1124.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1112.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1112.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1090.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1069.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1068.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1068.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1035.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1026.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1026.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1025.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1024.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1017.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1011.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1009.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1007.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1007.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1005.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1002.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 998.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 998.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 998.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 990.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 979.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 978.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 978.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 978.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 962.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 960.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 959.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 957.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 957.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 954.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 951.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 950.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 947.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 940.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 938.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 936.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 935.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 927.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 921.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 921.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 920.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 919.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 914.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 909.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 908.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 907.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 906.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 902.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 899.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 898.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 898.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 894.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 893.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 889.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 887.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 884.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 883.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 881.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 879.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 872.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 870.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 865.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 863.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 854.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 853.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 847.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 844.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 840.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 840.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 839.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 838.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 837.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 832.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 830.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 828.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 828.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 827.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 827.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 827.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 826.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 826.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 826.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 821.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 821.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 820.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 819.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 816.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 813.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 812.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 811.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 809.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 809.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 808.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 807.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 807.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 805.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 804.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 802.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 801.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 797.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 795.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 795.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 794.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 792.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 792.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 789.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 789.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 787.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 777.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 776.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 773.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 771.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 767.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 767.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 767.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 766.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 763.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 763.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 762.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 759.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 759.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 752.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 749.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 744.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 740.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 739.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 739.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 728.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 727.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 725.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 717.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 715.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 714.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 714.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 713.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 711.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 708.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 706.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 706.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 705.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 703.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 702.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 702.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 701.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 700.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 698.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 698.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 693.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 692.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 690.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 690.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 689.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 687.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 687.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 686.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 683.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 680.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 675.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 674.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 672.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 669.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 662.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 660.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 659.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 654.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 652.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 652.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 647.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 641.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 638.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 635.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 631.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 626.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 625.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 623.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 621.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 619.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 618.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 617.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 616.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 614.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 612.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 611.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 609.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 608.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 605.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 603.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 603.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 598.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 597.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 593.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 592.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 588.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 588.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 582.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 578.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 578.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 566.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 561.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 559.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 556.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 554.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 544.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 543.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 543.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 542.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 541.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 530.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 522.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 521.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 515.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 512.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 487.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 483.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 482.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 470.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 462.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 453.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 444.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 426.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 380.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 356.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 355.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 269.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 938.1
Samples: 246

Max nTPM: 3075.6
Min nTPM: 441.7
Std nTPM: 349.6
Median nTPM: 873.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3075.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2966.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 2487.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1811.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1800.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1786.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1627.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1611.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1572.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1538.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1527.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1515.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1501.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1465.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1452.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1431.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1420.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1398.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1391.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1385.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1359.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1357.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1355.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1354.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1351.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1342.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 1342.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1340.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1307.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1299.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 1284.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1281.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1280.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 1275.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1274.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1266.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1239.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1230.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1229.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1205.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1203.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1192.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1186.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1184.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1181.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1176.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1169.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1159.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1150.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 1124.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1122.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1112.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1111.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1108.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1107.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 1107.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1100.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1094.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 1093.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1088.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 1085.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 1083.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 1083.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 1072.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1067.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1065.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1055.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1053.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1052.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1050.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1050.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1050.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1036.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 1035.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1034.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1033.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1032.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1032.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 1025.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1016.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1010.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1005.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1004.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1004.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 989.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 983.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 983.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 976.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 974.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 973.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 969.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 965.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 963.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 958.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 954.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 951.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 947.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 947.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 932.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 931.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 931.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 929.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 928.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 926.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 925.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 921.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 919.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 919.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 918.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 914.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 912.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 908.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 903.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 901.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 900.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 897.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 896.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 891.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 889.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 886.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 881.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 879.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 873.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 873.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 867.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 865.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 864.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 864.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 855.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 854.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 852.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 849.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 848.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 844.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 840.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 838.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 837.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 832.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 832.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 830.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 830.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 830.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 827.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 823.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 820.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 819.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 817.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 816.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 815.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 815.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 813.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 812.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 811.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 805.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 801.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 795.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 790.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 790.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 788.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 778.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 778.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 771.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 771.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 770.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 768.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 765.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 762.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 762.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 761.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 761.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 760.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 759.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 756.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 751.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 736.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 729.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 728.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 727.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 725.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 724.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 716.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 714.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 713.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 707.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 704.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 702.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 701.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 701.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 696.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 696.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 690.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 689.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 682.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 676.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 672.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 671.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 663.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 662.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 660.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 652.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 649.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 646.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 644.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 642.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 640.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 637.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 633.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 632.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 632.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 628.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 627.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 625.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 619.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 617.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 611.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 611.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 603.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 597.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 597.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 596.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 596.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 592.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 587.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 585.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 578.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 575.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 573.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 571.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 569.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 567.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 561.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 559.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 554.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 553.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 546.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 544.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 540.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 527.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 514.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 513.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 476.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 459.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 457.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 450.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 446.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 441.7
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Brain - Putamen (basal ganglia)
Average nTPM: 903.6
Samples: 205

Max nTPM: 2350.6
Min nTPM: 388.6
Std nTPM: 261.0
Median nTPM: 866.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2350.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1914.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1764.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1545.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1494.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1467.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1457.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1439.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1404.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1398.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1398.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1353.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1332.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1308.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1308.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1277.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1273.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1259.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1245.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1241.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1232.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1231.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1231.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1222.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1215.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1212.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1210.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1206.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1205.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1179.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1176.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1172.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1148.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1148.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1147.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1146.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1144.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1132.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1131.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1071.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1066.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1065.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1060.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1056.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1042.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1038.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1037.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1032.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1018.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1016.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1015.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1010.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 997.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 993.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 992.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 984.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 973.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 965.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 957.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 956.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 948.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 947.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 943.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 941.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 938.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 938.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 933.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 933.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 933.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 931.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 930.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 918.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 916.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 915.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 912.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 911.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 910.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 909.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 905.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 902.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 902.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 902.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 900.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 899.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 899.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 899.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 898.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 898.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 897.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 897.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 897.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 895.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 891.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 891.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 891.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 884.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 881.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 879.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 878.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 875.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 868.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 867.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 866.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 861.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 854.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 853.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 850.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 849.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 849.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 849.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 847.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 844.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 844.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 840.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 839.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 839.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 839.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 832.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 830.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 827.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 822.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 821.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 820.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 813.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 812.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 812.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 804.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 802.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 798.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 796.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 787.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 783.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 781.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 780.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 780.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 779.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 779.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 776.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 773.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 770.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 769.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 763.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 761.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 760.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 757.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 753.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 752.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 751.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 750.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 749.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 739.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 737.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 736.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 733.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 732.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 722.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 722.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 719.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 717.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 702.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 700.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 700.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 698.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 697.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 691.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 691.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 687.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 684.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 683.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 681.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 676.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 672.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 667.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 667.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 665.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 661.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 661.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 659.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 654.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 651.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 647.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 643.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 629.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 627.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 624.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 620.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 612.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 610.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 608.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 608.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 603.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 602.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 585.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 584.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 577.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 575.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 573.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 565.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 558.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 550.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 546.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 544.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 544.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 510.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 388.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

280.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 277.5
FF:10164-103B2 76 years, female 277.5
Nucleus accumbens
Scaled Tags Per Million: 206.0
FF:10037-101F1 23-56 years, mixed 206.0
Putamen
Scaled Tags Per Million: 277.7
FF:10176-103C5 60 years, female 277.7
Globus pallidus
Scaled Tags Per Million: 280.0
FF:10175-103C4 60 years, female 291.9
FF:10161-103A8 76 years, female 268.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Pig sample Sample description nTPM
Caudate
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Putamen
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.0
Sample C Male 0.1
Sample D Male 0.0
Septum
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.1
Sample D Male 0.1
Ventral pallidum
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.1
Sample C Male 0.1
Sample D Male 0.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 65.4
Samples: 4

Max nTPM: 97.5
Min nTPM: 42.6
Sample A Male 55.0
Sample B Male 97.5
Sample C Female 42.6
Sample D Female 66.4
Septum
nTPM: 95.2
Samples: 4

Max nTPM: 112.3
Min nTPM: 78.1
Sample A Male 82.2
Sample B Male 112.3
Sample C Female 108.3
Sample D Female 78.1
Ventral forebrain
nTPM: 75.5
Samples: 4

Max nTPM: 107.0
Min nTPM: 56.9
Sample A Male 80.5
Sample B Male 56.9
Sample C Female 107.0
Sample D Female 57.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.7
69818379 Antisense, RP_050510_04_H09, Mouse strain C57BL/6J (56 days, male) 7.7
Pallidum
Expression energy: 8.1
69818379 Antisense, RP_050510_04_H09, Mouse strain C57BL/6J (56 days, male) 8.1

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