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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1043.4
nTPM
FANTOM5:
455.2
Scaled Tags Per Million
Pig:
668.9
nTPM
Allen mouse:
20.8
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1043.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 965.0
2188
Female, age 91, both hemispheres
1215.4
2301
Female, age 85, both hemispheres
1142.6
2090
Male, age 80, both hemispheres
983.2
1984
Male, age 76, both hemispheres
518.6
Dorsal cochlear nucleus nTPM: 785.9
2187
Female, age 91, both hemispheres
1120.3
2802
Male, age 74, right hemisphere
794.3
2378
Male, age 80, both hemispheres
728.5
2370
Male, age 61, both hemispheres
677.9
2058
Male, age 76, both hemispheres
608.6
Dorsal tegmental nucleus nTPM: 710.4
2083
Male, age 80, both hemispheres
1010.8
2326
Male, age 74, both hemispheres
887.5
1936
Male, age 76, left hemisphere
524.3
2358
Male, age 61, both hemispheres
419.0
Dorsolateral tegmental area nTPM: 766.9
2751
Female, age 85, both hemispheres
1217.1
2654
Male, age 80, both hemispheres
920.5
2337
Male, age 61, both hemispheres
726.0
2360
Male, age 74, both hemispheres
539.8
2141
Male, age 76, both hemispheres
431.3
Kolliker-Fuse nucleus nTPM: 853.6
2793
Female, age 91, left hemisphere
1290.0
2163
Male, age 80, both hemispheres
782.7
2315
Male, age 76, right hemisphere
488.1
Lateral lemniscal nuclei nTPM: 877.0
2320
Female, age 91, left hemisphere
1141.5
2746
Female, age 85, left hemisphere
894.0
2453
Male, age 74, right hemisphere
852.4
2169
Male, age 76, both hemispheres
764.3
2036
Male, age 80, both hemispheres
732.7
Lateral parabrachial nucleus nTPM: 836.5
2792
Male, age 76, both hemispheres
1069.8
2013
Male, age 80, both hemispheres
934.2
2790
Male, age 61, both hemispheres
684.4
2139
Female, age 85, right hemisphere
657.5
Lateral vestibular nucleus nTPM: 832.5
2311
Male, age 80, both hemispheres
958.0
2184
Male, age 76, both hemispheres
707.0
Locus coeruleus nTPM: 465.6
2720
Male, age 74, both hemispheres
547.0
2162
Male, age 80, both hemispheres
545.4
2317
Female, age 72, unknown
499.8
2123
Female, age 91, both hemispheres
488.5
2014
Male, age 55, unknown
470.9
2788
Male, age 74, unknown
362.9
1980
Male, age 76, both hemispheres
344.8
Medial parabrachial nucleus nTPM: 963.3
2170
Female, age 91, both hemispheres
1385.3
2463
Female, age 85, right hemisphere
1109.7
2854
Male, age 80, both hemispheres
917.3
2786
Male, age 76, both hemispheres
715.4
2156
Male, age 61, both hemispheres
688.9
Medial periolivary nuclei nTPM: 833.2
2081
Male, age 80, both hemispheres
997.2
2458
Female, age 91, both hemispheres
916.6
2791
Male, age 74, right hemisphere
900.1
2063
Male, age 76, both hemispheres
755.2
2171
Female, age 85, both hemispheres
596.8
Motor facial nucleus nTPM: 860.5
2126
Male, age 61, both hemispheres
1212.6
2365
Male, age 74, right hemisphere
1010.1
2697
Female, age 85, both hemispheres
869.8
2795
Female, age 91, both hemispheres
712.9
2327
Male, age 80, both hemispheres
705.6
2062
Male, age 76, both hemispheres
652.1
Motor trigeminal nucleus nTPM: 864.0
2560
Male, age 74, both hemispheres
1092.2
2321
Female, age 91, both hemispheres
1024.2
2079
Male, age 80, both hemispheres
799.4
2335
Male, age 61, both hemispheres
730.6
2309
Male, age 76, both hemispheres
673.8
Nuclei of the trapezoid body nTPM: 775.0
2159
Male, age 61, both hemispheres
931.3
2166
Male, age 80, both hemispheres
895.0
2368
Female, age 91, both hemispheres
813.6
1983
Male, age 76, both hemispheres
692.2
2735
Female, age 85, both hemispheres
543.0
Nucleus raphe magnus nTPM: 786.4
2459
Female, age 91, both hemispheres
1027.5
2051
Male, age 76, both hemispheres
913.5
2328
Male, age 80, both hemispheres
856.3
2455
Male, age 74, both hemispheres
807.9
2160
Male, age 61, both hemispheres
589.0
2172
Female, age 85, both hemispheres
524.0
Paramedian reticular nucleus nTPM: 785.0
2057
Male, age 80, both hemispheres
877.0
2050
Female, age 85, both hemispheres
867.5
2052
Male, age 76, both hemispheres
703.4
2313
Male, age 61, both hemispheres
692.2
Pedunculopontine tegmental nucleus nTPM: 657.4
2334
Male, age 80, both hemispheres
756.2
2338
Male, age 61, both hemispheres
616.0
1921
Female, age 85, both hemispheres
600.0
Pontine nuclei nTPM: 1013.6
2454
Male, age 74, left hemisphere
1508.2
2319
Female, age 91, both hemispheres
1212.7
2109
Female, age 72, unknown
1134.3
1863
Male, age 55, unknown
939.3
1968
Male, age 76, left hemisphere
896.8
2115
Male, age 80, left hemisphere
870.0
2787
Female, age 85, both hemispheres
802.1
2727
Male, age 61, right hemisphere
745.6
Pontine raphe nucleus nTPM: 605.4
2122
Female, age 85, midline
680.6
2853
Male, age 76, midline
530.2
Posteroventral cochlear nucleus nTPM: 929.1
2135
Female, age 91, both hemispheres
1269.9
2341
Male, age 80, both hemispheres
1130.7
2070
Male, age 76, both hemispheres
866.1
2371
Male, age 61, both hemispheres
731.0
2752
Female, age 85, both hemispheres
647.6
Principal sensory trigeminal nucleus nTPM: 785.6
2367
Female, age 91, left hemisphere
1181.4
2008
Male, age 80, left hemisphere
719.0
2158
Male, age 61, both hemispheres
631.2
2324
Male, age 76, both hemispheres
610.6
Reticular pontine nucleus, caudal nTPM: 1002.5
2559
Male, age 74, both hemispheres
1269.1
2457
Female, age 91, both hemispheres
1087.9
2092
Male, age 76, both hemispheres
880.0
2332
Male, age 80, right hemisphere
773.2
Reticular pontine nucleus, oral nTPM: 1043.4
2361
Male, age 74, both hemispheres
1405.9
2366
Female, age 91, both hemispheres
1165.2
2012
Female, age 85, both hemispheres
926.5
1939
Male, age 80, both hemispheres
918.9
2167
Male, age 76, both hemispheres
800.3
Reticulotegmental nucleus nTPM: 824.3
2322
Female, age 91, both hemispheres
1051.9
2452
Male, age 74, both hemispheres
920.8
2333
Male, age 80, both hemispheres
855.7
2325
Male, age 76, both hemispheres
468.9
Spinal trigeminal nucleus, oral nTPM: 731.7
2164
Male, age 80, both hemispheres
863.2
1978
Male, age 76, both hemispheres
744.7
2737
Female, age 85, both hemispheres
587.2
Subcoeruleus area nTPM: 812.8
2369
Female, age 85, left hemisphere
1337.5
1958
Male, age 80, both hemispheres
761.7
2089
Male, age 76, left hemisphere
748.9
2323
Female, age 91, left hemisphere
627.2
2451
Male, age 74, both hemispheres
588.6
Superior olive nTPM: 899.8
2364
Male, age 74, right hemisphere
988.8
2020
Male, age 76, both hemispheres
981.7
2329
Male, age 80, right hemisphere
939.1
2561
Female, age 91, both hemispheres
845.6
1875
Female, age 85, both hemispheres
743.6
Ventral periolivary nuclei nTPM: 722.1
2023
Male, age 76, both hemispheres
1006.2
2165
Male, age 80, both hemispheres
781.5
2794
Female, age 91, left hemisphere
579.9
2130
Female, age 85, both hemispheres
521.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 874.4
2456
Female, age 91, both hemispheres
1064.1
2449
Male, age 74, both hemispheres
928.9
2840
Female, age 85, both hemispheres
860.0
2161
Male, age 80, both hemispheres
836.6
1959
Male, age 76, both hemispheres
821.3
2359
Male, age 61, both hemispheres
735.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
668.9
Pig sample
Sample description
nTPM
Pons nTPM: 669.0
Samples: 4
Max nTPM: 907.0
Min nTPM: 493.4
Sample A
Female
651.3
Sample B
Female
493.4
Sample C
Male
624.1
Sample D
Male
907.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
