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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:526.4 nTPM
HPA Brain:451.9 nTPM
GTEx:526.4 nTPM
FANTOM5:346.5 Scaled Tags Per Million
Pig:449.0 nTPM
Mouse:268.7 nTPM
Allen mouse:1.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA045177Antibody CAB025346
Glial cells LowMedium
Neuronal cells MediumMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

451.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 418.4
2846 Female, age 79, unknown 481.9
1781 Male, age 74, unknown 477.6
1857 Female, age 85, left hemisphere 458.0
2290 Female, age 72, unknown 448.5
1854 Male, age 80, left hemisphere 388.2
2289 Male, age 61, right hemisphere 385.1
2288 Male, age 75, left hemisphere 379.6
2481 Female, age 94, left hemisphere 328.0
Globus pallidus, externus
nTPM: 399.6
2646 Male, age 61, right hemisphere 471.3
2567 Female, age 72, unknown 432.6
2395 Male, age 75, both hemispheres 379.4
2772 Female, age 79, unknown 367.7
1996 Male, age 80, right hemisphere 347.2
Globus pallidus, internus
nTPM: 365.6
2287 Male, age 75, right hemisphere 415.3
2566 Female, age 72, unknown 412.0
2483 Female, age 94, right hemisphere 406.7
2778 Female, age 91, both hemispheres 355.3
1818 Male, age 74, unknown 349.5
2037 Male, age 80, right hemisphere 322.9
2111 Female, age 85, right hemisphere 297.6
Nucleus accumbens
nTPM: 415.4
1783 Male, age 74, unknown 517.0
1856 Female, age 91, right hemisphere 477.8
1806 Female, age 85, left hemisphere 450.7
2824 Male, age 61, right hemisphere 445.8
2698 Female, age 72, unknown 420.9
2286 Male, age 75, left hemisphere 383.1
2391 Female, age 94, left hemisphere 332.7
2732 Male, age 80, right hemisphere 295.3
Nucleus basalis of Meynert
nTPM: 418.8
2569 Male, age 61, both hemispheres 504.4
2821 Male, age 75, both hemispheres 403.8
2484 Female, age 94, left hemisphere 389.0
2393 Male, age 80, right hemisphere 377.8
Nucleus of the diagonal band
nTPM: 451.9
2775 Male, age 80, right hemisphere 506.5
2029 Male, age 61, right hemisphere 488.4
1812 Female, age 91, both hemispheres 470.4
2195 Female, age 85, both hemispheres 456.7
1979 Male, age 74, unknown 337.6
Putamen
nTPM: 438.6
2647 Male, age 75, left hemisphere 538.8
1937 Female, age 91, right hemisphere 452.3
1829 Male, age 74, unknown 445.7
1838 Male, age 80, right hemisphere 434.2
2466 Female, age 79, unknown 433.5
2489 Female, age 72, unknown 420.9
2482 Female, age 94, left hemisphere 344.5
Septal nuclei
nTPM: 410.4
1960 Male, age 74, unknown 524.2
2031 Female, age 72, unknown 474.9
2629 Female, age 94, right hemisphere 421.7
2059 Female, age 85, both hemispheres 408.7
2009 Female, age 91, both hemispheres 389.8
2394 Male, age 61, left hemisphere 354.3
2199 Male, age 80, right hemisphere 299.3
Stria terminalis, bed nucleus
nTPM: 405.9
1974 Female, age 91, both hemispheres 473.9
2486 Female, age 94, both hemispheres 396.3
2201 Male, age 74, unknown 347.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

526.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 476.2
Samples: 246

Max nTPM: 849.3
Min nTPM: 205.4
Std nTPM: 108.2
Median nTPM: 472.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 849.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 794.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 792.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 771.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 763.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 753.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 743.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 719.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 713.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 704.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 683.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 671.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 667.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 650.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 648.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 643.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 640.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 640.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 629.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 619.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 618.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 612.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 609.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 604.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 597.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 593.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 591.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 591.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 586.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 582.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 580.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 578.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 574.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 573.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 573.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 573.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 573.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 572.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 570.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 569.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 567.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 567.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 566.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 565.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 562.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 561.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 561.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 559.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 556.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 555.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 554.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 554.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 552.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 550.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 549.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 547.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 546.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 545.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 545.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 544.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 543.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 543.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 541.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 540.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 540.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 538.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 529.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 528.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 528.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 528.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 528.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 527.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 526.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 524.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 523.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 523.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 518.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 518.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 518.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 517.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 517.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 516.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 514.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 512.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 510.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 509.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 509.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 508.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 508.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 507.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 505.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 502.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 501.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 500.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 500.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 500.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 499.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 498.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 498.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 498.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 497.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 497.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 494.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 493.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 492.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 492.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 491.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 491.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 489.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 489.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 489.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 488.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 487.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 487.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 486.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 486.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 486.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 486.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 485.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 477.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 476.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 475.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 472.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 471.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 471.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 471.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 468.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 465.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 464.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 463.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 463.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 463.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 461.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 459.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 459.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 459.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 459.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 457.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 456.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 454.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 453.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 453.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 453.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 452.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 452.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 451.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 451.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 450.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 449.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 447.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 445.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 445.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 439.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 438.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 438.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 437.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 436.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 436.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 431.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 429.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 428.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 428.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 426.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 426.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 425.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 423.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 423.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 423.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 423.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 422.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 422.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 420.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 419.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 418.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 417.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 417.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 416.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 415.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 415.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 414.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 412.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 410.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 409.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 407.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 405.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 400.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 400.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 400.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 400.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 398.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 397.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 396.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 394.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 394.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 392.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 390.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 389.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 387.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 384.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 383.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 383.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 383.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 382.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 381.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 381.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 381.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 377.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 374.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 374.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 373.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 367.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 364.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 362.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 361.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 353.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 348.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 348.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 347.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 347.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 343.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 342.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 342.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 341.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 339.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 337.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 336.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 329.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 325.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 319.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 319.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 319.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 317.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 313.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 311.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 310.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 307.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 305.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 274.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 273.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 273.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 272.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 260.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 248.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 238.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 226.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 205.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 516.1
Samples: 246

Max nTPM: 1074.9
Min nTPM: 179.3
Std nTPM: 126.7
Median nTPM: 505.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1074.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1074.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 853.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 839.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 826.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 826.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 770.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 752.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 741.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 741.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 734.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 731.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 730.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 728.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 721.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 721.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 710.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 703.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 693.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 691.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 690.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 690.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 687.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 678.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 676.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 672.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 669.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 660.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 659.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 652.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 647.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 647.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 641.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 636.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 634.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 631.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 628.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 625.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 622.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 622.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 618.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 618.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 617.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 614.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 611.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 610.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 608.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 604.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 604.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 603.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 602.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 601.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 601.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 596.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 591.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 588.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 585.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 584.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 583.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 583.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 582.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 581.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 579.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 578.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 578.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 574.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 572.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 571.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 570.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 570.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 568.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 568.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 567.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 565.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 564.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 562.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 561.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 561.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 560.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 560.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 559.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 559.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 558.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 558.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 557.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 557.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 557.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 556.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 549.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 548.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 547.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 546.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 545.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 545.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 545.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 544.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 543.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 541.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 540.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 540.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 539.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 535.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 535.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 533.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 533.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 526.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 526.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 525.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 521.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 521.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 519.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 518.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 517.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 516.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 514.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 514.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 513.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 512.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 511.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 510.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 509.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 508.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 506.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 504.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 503.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 500.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 500.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 498.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 498.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 496.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 495.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 493.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 487.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 486.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 485.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 484.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 483.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 483.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 483.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 482.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 481.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 480.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 479.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 479.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 476.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 476.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 475.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 474.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 473.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 473.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 472.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 471.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 468.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 467.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 467.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 465.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 463.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 463.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 463.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 461.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 461.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 457.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 456.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 456.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 455.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 455.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 454.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 453.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 453.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 451.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 450.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 450.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 450.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 449.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 449.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 448.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 448.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 446.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 446.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 446.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 445.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 444.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 443.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 443.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 441.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 440.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 436.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 434.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 434.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 432.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 431.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 431.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 428.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 426.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 426.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 425.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 424.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 424.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 424.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 424.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 422.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 421.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 419.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 419.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 418.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 416.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 416.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 415.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 411.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 411.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 408.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 407.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 406.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 404.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 402.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 388.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 388.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 380.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 379.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 379.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 372.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 371.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 370.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 367.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 364.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 361.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 360.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 357.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 357.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 354.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 346.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 339.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 337.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 333.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 332.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 326.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 323.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 315.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 306.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 284.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 274.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 240.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 205.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 200.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 195.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 179.3
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 526.4
Samples: 205

Max nTPM: 935.8
Min nTPM: 251.3
Std nTPM: 123.2
Median nTPM: 512.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 935.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 904.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 876.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 838.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 796.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 772.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 772.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 771.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 740.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 736.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 714.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 709.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 705.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 701.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 701.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 700.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 698.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 694.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 688.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 685.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 683.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 674.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 667.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 665.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 663.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 663.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 659.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 655.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 655.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 653.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 653.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 653.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 648.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 646.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 642.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 641.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 639.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 635.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 634.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 630.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 628.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 626.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 624.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 622.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 622.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 621.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 621.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 617.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 617.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 616.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 612.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 610.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 607.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 607.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 606.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 606.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 598.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 598.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 597.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 594.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 594.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 589.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 585.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 582.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 580.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 579.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 577.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 576.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 573.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 573.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 571.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 570.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 567.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 567.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 564.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 563.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 561.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 556.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 554.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 553.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 553.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 551.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 549.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 548.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 542.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 540.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 539.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 538.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 538.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 535.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 534.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 532.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 531.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 530.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 529.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 529.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 527.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 527.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 522.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 521.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 520.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 520.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 512.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 512.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 512.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 509.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 509.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 508.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 507.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 506.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 501.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 501.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 501.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 500.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 499.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 498.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 498.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 497.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 496.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 493.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 493.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 493.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 492.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 492.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 492.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 491.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 490.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 490.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 489.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 489.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 488.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 487.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 487.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 487.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 485.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 484.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 484.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 481.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 479.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 477.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 464.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 462.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 461.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 460.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 456.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 455.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 453.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 453.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 451.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 449.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 444.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 443.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 441.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 441.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 439.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 437.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 437.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 435.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 435.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 433.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 424.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 424.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 417.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 415.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 412.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 408.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 406.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 406.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 406.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 405.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 402.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 398.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 398.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 397.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 393.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 392.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 391.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 387.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 385.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 384.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 381.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 379.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 377.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 374.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 367.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 364.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 362.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 358.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 354.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 351.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 350.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 345.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 345.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 344.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 339.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 338.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 332.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 330.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 329.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 303.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 297.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 291.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 280.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 252.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 251.3
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

346.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 231.6
FF:10164-103B2 76 years, female 231.6
Nucleus accumbens
Scaled Tags Per Million: 346.5
FF:10037-101F1 23-56 years, mixed 346.5
Putamen
Scaled Tags Per Million: 288.2
FF:10176-103C5 60 years, female 288.2
Globus pallidus
Scaled Tags Per Million: 136.0
FF:10175-103C4 60 years, female 141.2
FF:10161-103A8 76 years, female 130.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

449.0
Pig sample Sample description nTPM
Caudate
nTPM: 449.1
Samples: 4

Max nTPM: 542.2
Min nTPM: 362.8
Sample A Female 362.8
Sample B Female 501.4
Sample C Male 542.2
Sample D Male 389.8
Putamen
nTPM: 448.0
Samples: 4

Max nTPM: 588.6
Min nTPM: 274.1
Sample A Female 274.1
Sample B Female 421.3
Sample C Male 588.6
Sample D Male 508.0
Septum
nTPM: 299.3
Samples: 4

Max nTPM: 329.4
Min nTPM: 273.6
Sample A Female 329.4
Sample B Female 314.8
Sample C Male 279.5
Sample D Male 273.6
Ventral pallidum
nTPM: 334.9
Samples: 4

Max nTPM: 365.4
Min nTPM: 295.7
Sample A Female 362.5
Sample B Female 365.4
Sample C Male 295.7
Sample D Male 315.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

268.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 268.8
Samples: 4

Max nTPM: 355.2
Min nTPM: 203.1
Sample A Male 275.4
Sample B Male 355.2
Sample C Female 203.1
Sample D Female 241.3
Septum
nTPM: 262.2
Samples: 4

Max nTPM: 285.8
Min nTPM: 217.9
Sample A Male 264.9
Sample B Male 285.8
Sample C Female 280.3
Sample D Female 217.9
Ventral forebrain
nTPM: 267.6
Samples: 4

Max nTPM: 319.7
Min nTPM: 226.8
Sample A Male 279.0
Sample B Male 244.9
Sample C Female 319.7
Sample D Female 226.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.0
71487112 Antisense, RP_050913_01_C07, Mouse strain C57BL/6J (56 days, male) 1.0
Pallidum
Expression energy: 0.6
71487112 Antisense, RP_050913_01_C07, Mouse strain C57BL/6J (56 days, male) 0.6

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