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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Not detected
Cells in molecular layer: Not detected
Purkinje cells: Not detected
Mouse brain, Intensity
Cerebellumi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

91.990
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:182.5 nTPM
HPA Brain:104.3 nTPM
GTEx:182.5 nTPM
FANTOM5:115.4 Scaled Tags Per Million
Pig:157.2 nTPM
Mouse:205.6 nTPM
Allen mouse:4.0 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA023548Antibody HPA070733
Purkinje cells Not detectedNot detected
Cells in granular layer Not detectedNot detected
Cells in molecular layer Not detectedNot detected





CEREBELLUM - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA023548
Cerebellum mean intensity 91.990
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Vestibulocerebellar nucleus -
Moleuclar layer of the cerebellum 62.982
Purkinje layer of the cerebellum 91.990
Granular layer of the cerebellum 41.544

CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.3
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 104.3
2101 Male, age 74, right hemisphere 150.2
2055 Female, age 91, right hemisphere 120.6
1774 Male, age 80, left hemisphere 109.8
1768 Female, age 72, unknown 104.7
2006 Male, age 61, right hemisphere 101.9
1769 Male, age 76, right hemisphere 94.9
1788 Male, age 55, unknown 94.2
2003 Female, age 85, right hemisphere 57.8
Cerebellar nuclei
nTPM: 68.6
2177 Female, age 85, both hemispheres 85.6
2783 Female, age 72, unknown 85.0
2318 Male, age 74, left hemisphere 76.9
1966 Female, age 91, left hemisphere 72.6
2882 Male, age 76, left hemisphere 72.1
1879 Male, age 55, unknown 63.1
2005 Male, age 80, left hemisphere 55.4
1871 Male, age 74, unknown 53.6
2175 Male, age 61, right hemisphere 53.2
Flocculonodular lobe
nTPM: 103.5
2176 Female, age 91, right hemisphere 128.3
1792 Male, age 74, unknown 128.0
1771 Male, age 80, left hemisphere 122.6
1835 Female, age 85, right hemisphere 88.7
1767 Male, age 76, left hemisphere 86.9
1765 Male, age 55, unknown 85.7
2004 Male, age 61, right hemisphere 84.1
Vermis
nTPM: 100.4
1751 Male, age 74, right hemisphere 133.5
1778 Female, age 91, left hemisphere 110.8
2834 Male, age 80, left hemisphere 103.5
1988 Female, age 85, left hemisphere 100.4
1825 Male, age 74, unknown 95.2
1928 Female, age 72, unknown 94.6
1770 Male, age 76, left hemisphere 94.3
2460 Male, age 61, both hemispheres 93.5
1766 Male, age 55, unknown 77.9

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

182.5
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 179.7
Samples: 215

Max nTPM: 264.4
Min nTPM: 95.5
Std nTPM: 30.5
Median nTPM: 179.7
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 264.4
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 261.2
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 251.1
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 247.2
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 242.1
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 240.8
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 240.3
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 239.8
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 239.7
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 238.5
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 232.6
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 232.1
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 231.8
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 230.8
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 230.7
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 230.1
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 228.2
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 225.0
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 224.0
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 220.4
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 220.3
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 218.2
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 217.8
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 217.3
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 216.0
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 214.1
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 214.0
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 212.9
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 212.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 210.6
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 209.8
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 209.3
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 207.3
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 206.2
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 205.9
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 205.3
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 205.2
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 205.0
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 203.3
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 203.1
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 203.0
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 202.9
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 202.1
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 201.9
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 201.6
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 201.6
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 201.2
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 200.9
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 200.6
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 200.3
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 199.9
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 199.1
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 198.9
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 198.3
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 197.8
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 196.9
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 196.7
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 196.2
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 196.2
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 196.2
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 195.8
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 195.4
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 195.3
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 195.2
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 194.3
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 194.1
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 193.8
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 192.2
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 192.0
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 191.7
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 191.4
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 191.3
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 191.1
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 190.9
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 190.5
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 190.1
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 190.1
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 189.8
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 189.8
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 189.7
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 189.4
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 189.3
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 188.7
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 188.7
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 188.2
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 187.7
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 186.9
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 186.5
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 186.1
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 186.1
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 186.1
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 185.8
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 185.6
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 185.4
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 185.3
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 184.1
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 183.3
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 183.0
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 183.0
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 181.6
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 181.5
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 181.1
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 181.1
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 180.6
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 180.6
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 180.2
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 180.2
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 179.7
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 179.5
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 179.3
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 179.3
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 178.9
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 178.9
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 178.7
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 178.6
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 178.4
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 177.7
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 176.2
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 176.0
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 175.5
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 175.0
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 174.3
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 174.2
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 174.1
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 173.0
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 172.8
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 172.1
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 171.9
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 171.7
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 171.6
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 171.1
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 170.9
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 170.5
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 170.4
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 170.3
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 169.1
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 169.0
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 168.9
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 168.9
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 168.4
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 168.1
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 167.8
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 166.5
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 166.3
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 166.2
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 165.7
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 165.4
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 165.1
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 164.6
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 164.3
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 163.5
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 163.0
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 162.9
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 162.9
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 162.2
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 162.0
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 161.5
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 161.2
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 160.3
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 160.2
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 160.0
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 159.9
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 159.6
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 159.2
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 159.0
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 158.7
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 158.4
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 158.1
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 157.7
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 157.0
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 156.0
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 155.9
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 155.1
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 155.0
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 154.9
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 154.6
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 153.9
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 153.8
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 152.8
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 152.5
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 152.0
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 151.5
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 150.3
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 150.3
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 150.0
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 149.6
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 148.5
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 148.4
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 148.2
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 147.2
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 144.0
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 143.8
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 142.6
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 142.0
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 141.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 141.1
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 139.2
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 139.2
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 138.8
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 136.9
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 136.8
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 135.0
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 134.8
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 133.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 130.2
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 129.4
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 129.2
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 118.0
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 117.0
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 112.2
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 107.4
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 106.4
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 106.0
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 100.9
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 95.5
Show allShow less
Brain - Cerebellum
Average nTPM: 182.5
Samples: 241

Max nTPM: 251.1
Min nTPM: 90.3
Std nTPM: 29.3
Median nTPM: 184.9
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 251.1
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 247.4
GTEX-WL46-2826-SM-3LK81 50-59 years, male 246.6
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 245.3
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 244.6
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 243.0
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 242.7
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 235.6
GTEX-1192X-3226-SM-5987D 50-59 years, male 235.5
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 233.6
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 232.2
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 231.9
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 229.2
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 222.5
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 222.3
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 222.1
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 222.0
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 221.2
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 221.1
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 220.8
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 219.8
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 217.5
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 216.4
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 216.2
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 215.2
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 214.9
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 214.4
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 214.3
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 214.2
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 214.1
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 214.1
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 214.0
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 213.6
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 211.6
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 211.5
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 210.6
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 210.2
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 210.2
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 209.5
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 209.1
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 208.8
GTEX-14ABY-3026-SM-664NE 50-59 years, male 208.2
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 208.1
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 207.5
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 207.2
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 207.0
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 207.0
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 206.5
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 205.8
GTEX-14E6D-2926-SM-664OP 50-59 years, male 205.8
GTEX-13112-2926-SM-5DUWT 50-59 years, male 205.3
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 205.0
GTEX-X261-3126-SM-4PQZC 50-59 years, male 204.9
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 204.2
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 203.9
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 203.8
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 203.7
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 203.7
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 203.1
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 202.9
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 201.8
GTEX-12126-0926-SM-5FQTW 20-29 years, male 200.9
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 200.5
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 200.1
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 199.9
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 199.8
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 199.6
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 199.6
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 199.1
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 198.9
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 198.6
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 197.9
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 197.2
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 197.2
GTEX-11ONC-3026-SM-5985W 60-69 years, male 196.8
GTEX-14PN4-3026-SM-664O4 50-59 years, male 196.6
GTEX-1B933-3026-SM-731DB 50-59 years, female 196.4
GTEX-11EI6-2926-SM-5985U 60-69 years, male 195.8
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 195.8
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 195.1
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 195.1
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 195.1
GTEX-11NUK-3026-SM-5986K 50-59 years, male 194.8
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 194.1
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 194.0
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 193.8
GTEX-18465-2926-SM-7KFSE 50-59 years, male 192.9
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 192.8
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 192.7
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 191.7
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 191.7
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 191.6
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 191.5
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 191.2
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 191.1
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 190.5
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 190.1
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 189.5
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 189.4
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 188.9
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 188.9
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 188.8
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 188.2
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 188.1
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 188.1
GTEX-11DYG-2926-SM-5H132 60-69 years, male 188.0
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 187.8
GTEX-144GL-2926-SM-5O99F 50-59 years, male 187.2
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 187.2
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 186.9
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 186.5
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 185.9
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 185.9
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 185.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 185.8
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 185.7
GTEX-17EVP-2926-SM-793BU 40-49 years, male 185.6
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 185.6
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 185.5
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 184.9
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 184.9
GTEX-15G19-2826-SM-6M48K 60-69 years, male 184.0
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 183.9
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 183.6
GTEX-145LS-3026-SM-5O99S 60-69 years, female 183.5
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 183.4
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 183.1
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 183.0
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 182.9
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 182.5
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 182.0
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 182.0
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 181.8
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 181.7
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 181.3
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 181.1
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 180.9
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 180.8
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 180.6
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 180.3
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 180.0
GTEX-17HII-2926-SM-79OMK 50-59 years, male 179.7
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 179.7
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 179.6
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 179.5
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 179.4
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 179.3
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 178.6
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 178.6
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 178.4
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 178.0
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 177.3
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 176.9
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 176.9
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 176.7
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 176.4
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 176.4
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 176.3
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 176.2
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 175.5
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 175.2
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 174.1
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 173.3
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 173.0
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 172.9
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 172.5
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 172.3
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 171.4
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 171.2
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 171.0
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 170.5
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 168.9
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 168.8
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 168.8
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 168.4
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 167.8
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 167.6
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 167.4
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 167.0
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 167.0
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 166.4
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 165.6
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 165.3
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 165.2
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 164.5
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 164.5
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 163.6
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 162.7
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 162.5
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 161.7
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 161.4
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 160.8
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 160.8
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 159.9
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 158.2
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 157.2
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 157.1
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 157.1
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 156.9
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 155.7
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 155.7
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 155.6
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 155.4
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 155.3
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 155.1
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 152.7
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 152.6
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 151.5
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 151.0
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 149.3
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 148.8
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 147.7
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 147.5
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 147.5
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 146.6
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 143.4
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 140.4
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 139.0
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 138.7
GTEX-RU72-2926-SM-2TF66 50-59 years, female 138.4
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 136.3
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 135.8
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 133.7
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 133.4
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 131.9
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 131.8
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 129.3
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 127.9
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 126.7
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 125.9
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 125.1
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 124.2
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 123.1
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 122.2
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 121.6
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 118.2
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 117.0
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 115.1
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 102.2
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 93.8
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 90.3
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

115.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 115.4
FF:10083-102B2 22-68 years, mixed 140.4
FF:10166-103B4 76 years, female 90.4

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

157.2
Pig sample Sample description nTPM
Cerebellum
nTPM: 157.2
Samples: 4

Max nTPM: 241.7
Min nTPM: 116.1
Sample A Female 241.7
Sample B Female 139.2
Sample C Male 116.1
Sample D Male 131.9

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

205.6
Mouse sample Sample description nTPM
Cerebellum
nTPM: 205.6
Samples: 4

Max nTPM: 218.2
Min nTPM: 196.2
Sample A Male 218.2
Sample B Male 207.4
Sample C Female 200.7
Sample D Female 196.2

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.0
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 4.0
68745366 Antisense, RP_050210_01_G09, Mouse strain C57BL/6J (56 days, male) 4.0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


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