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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:411.5 nTPM
GTEx:411.5 nTPM
FANTOM5:495.6 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB037134Antibody CAB037140
Squamous epithelial cells MediumMedium




VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

411.5
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 411.5
Samples: 156

Max nTPM: 913.4
Min nTPM: 196.9
Std nTPM: 140.8
Median nTPM: 381.7
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 913.4
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 792.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 773.1
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 743.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 721.4
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 714.6
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 704.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 701.6
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 687.3
GTEX-QCQG-1226-SM-48U23 50-59 years, female 679.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 664.5
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 637.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 637.1
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 623.2
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 602.8
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 590.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 582.0
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 578.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 577.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 577.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 576.9
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 576.7
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 574.2
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 572.3
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 571.8
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 571.1
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 568.1
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 567.0
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 555.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 543.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 533.5
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 527.0
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 522.4
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 514.5
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 510.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 508.9
GTEX-14PKU-1326-SM-6871B 40-49 years, female 504.1
GTEX-S341-1226-SM-4AD5S 40-49 years, female 500.6
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 499.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 498.1
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 494.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 492.1
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 487.8
GTEX-11I78-2026-SM-5987C 50-59 years, female 485.9
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 481.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 479.6
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 474.5
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 465.9
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 465.0
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 459.6
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 456.6
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 456.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 452.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 444.8
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 442.2
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 442.1
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 441.4
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 431.6
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 430.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 424.5
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 423.4
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 420.1
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 419.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 418.9
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 413.8
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 409.8
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 407.1
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 404.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 403.1
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 399.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 397.4
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 396.9
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 393.3
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 392.1
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 387.8
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 385.4
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 383.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 382.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 380.8
GTEX-1C475-0526-SM-793AC 40-49 years, female 378.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 376.6
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 375.7
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 373.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 373.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 371.5
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 371.0
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 370.4
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 361.9
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 361.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 358.4
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 358.0
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 354.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 353.8
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 352.6
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 350.4
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 349.6
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 347.5
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 347.3
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 335.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 335.7
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 331.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 331.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 328.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 324.7
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 322.8
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 322.6
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 319.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 316.6
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 315.2
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 314.7
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 313.8
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 312.4
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 312.3
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 311.4
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 307.8
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 303.8
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 303.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 301.6
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 300.3
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 299.5
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 298.7
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 296.5
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 294.8
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 292.6
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 291.9
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 290.4
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 288.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 284.8
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 284.4
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 282.3
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 280.9
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 273.6
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 273.4
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 271.5
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 269.9
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 263.7
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 263.6
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 262.3
GTEX-16NPV-2526-SM-6M483 50-59 years, female 259.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 255.9
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 255.5
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 253.3
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 250.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 245.8
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 244.8
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 237.2
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 233.7
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 231.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 225.0
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 218.5
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 218.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 215.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 210.6
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 207.1
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 201.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 196.9
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

495.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 495.6
FF:10204-103F6 68 years, female 495.6

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